RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 CDSNQ15517 529 aa8.75□□□□□ -1.01
SIN3A-202ENST00000394947 CHCHD7Q9BUK0 85 aa8.75□□□□□ -1.01
SIN3A-202ENST00000394947 CEP192Q8TEP8 1941 aa8.75□□□□□ -1.01
SIN3A-202ENST00000394947 ATRXP46100 2492 aa8.75□□□□□ -1.01
SIN3A-202ENST00000394947 POLR2KP53803 58 aaKnown RBP8.75□□□□□ -1.01
SIN3A-202ENST00000394947 AVPP01185 164 aa8.74□□□□□ -1.01
SIN3A-202ENST00000394947 KLLNB2CW77 178 aa8.74□□□□□ -1.01
SIN3A-202ENST00000394947 FBXL19-AS1Q494R0 122 aa8.74□□□□□ -1.01
SIN3A-202ENST00000394947 C11orf71Q6IPW1 123 aa8.74□□□□□ -1.01
SIN3A-202ENST00000394947 GPR179Q6PRD1 2367 aa8.74□□□□□ -1.01
SIN3A-202ENST00000394947 hDV103S1A0JD37 113 aa8.73□□□□□ -1.01
SIN3A-202ENST00000394947 MOBPQ13875 183 aa8.73□□□□□ -1.01
SIN3A-202ENST00000394947 IGIPA6NJ69 53 aa8.73□□□□□ -1.01
SIN3A-202ENST00000394947 KRTAP10-9P60411 292 aa8.73□□□□□ -1.01
SIN3A-202ENST00000394947 C4orf26Q17RF5 130 aa8.73□□□□□ -1.01
SIN3A-202ENST00000394947 Q6ZRU5 148 aa8.73□□□□□ -1.01
SIN3A-202ENST00000394947 SMCR5Q8TEV8 140 aa8.72□□□□□ -1.01
SIN3A-202ENST00000394947 EGFEM1PQ0D2K5 195 aa8.72□□□□□ -1.01
SIN3A-202ENST00000394947 FHL2Q14192 279 aa8.72□□□□□ -1.01
SIN3A-202ENST00000394947 TMEM254Q8TBM7 123 aa8.72□□□□□ -1.01
SIN3A-202ENST00000394947 SRCAPQ6ZRS2 3230 aa8.71□□□□□ -1.01
SIN3A-202ENST00000394947 LINC00846Q9NV44 126 aa8.71□□□□□ -1.01
SIN3A-202ENST00000394947 CRIP3Q6Q6R5 217 aa8.71□□□□□ -1.01
SIN3A-202ENST00000394947 PTPRQQ9UMZ3 2332 aa8.71□□□□□ -1.02
SIN3A-202ENST00000394947 SSBP3-AS1Q7Z2R9 100 aa8.71□□□□□ -1.02
SIN3A-202ENST00000394947 KIAA0087Q14695 138 aa8.7□□□□□ -1.02
SIN3A-202ENST00000394947 HIVEP2P31629 2446 aa8.7□□□□□ -1.02
SIN3A-202ENST00000394947 CREBBPQ92793 2442 aa8.7□□□□□ -1.02
SIN3A-202ENST00000394947 RPL37AP61513 92 aaKnown RBP8.7□□□□□ -1.02
SIN3A-202ENST00000394947 ODF3L2Q3SX64 289 aa8.7□□□□□ -1.02
SIN3A-202ENST00000394947 CSPG4Q6UVK1 2322 aa8.7□□□□□ -1.02
SIN3A-202ENST00000394947 Q8N6K4 173 aa8.69□□□□□ -1.02
SIN3A-202ENST00000394947 TECTAO75443 2155 aa8.69□□□□□ -1.02
SIN3A-202ENST00000394947 LINC00574Q9H8X3 128 aa8.68□□□□□ -1.02
SIN3A-202ENST00000394947 C22orf24Q9Y442 160 aa8.68□□□□□ -1.02
SIN3A-202ENST00000394947 IGLV1-40P01703 118 aa8.68□□□□□ -1.02
SIN3A-202ENST00000394947 YPEL4Q96NS1 127 aa8.68□□□□□ -1.02
SIN3A-202ENST00000394947 FAM208BQ5VWN6 2430 aa8.67□□□□□ -1.02
SIN3A-202ENST00000394947 LYPD5Q6UWN5 251 aa8.67□□□□□ -1.02
SIN3A-202ENST00000394947 OTOGLQ3ZCN5 2332 aa8.67□□□□□ -1.02
SIN3A-202ENST00000394947 ATP11AUNQ6ZP68 121 aa8.66□□□□□ -1.02
SIN3A-202ENST00000394947 LIMD2Q9BT23 127 aa8.66□□□□□ -1.02
SIN3A-202ENST00000394947 C6orf48Q9UBA6 75 aa8.66□□□□□ -1.02
SIN3A-202ENST00000394947 URB1-AS1Q96HZ7 61 aa8.65□□□□□ -1.02
SIN3A-202ENST00000394947 MUC7Q8TAX7 377 aa8.64□□□□□ -1.03
SIN3A-202ENST00000394947 SPG11Q96JI7 2443 aa8.64□□□□□ -1.03
SIN3A-202ENST00000394947 APLNQ9ULZ1 77 aa8.64□□□□□ -1.03
SIN3A-202ENST00000394947 LRP4O75096 1905 aa8.63□□□□□ -1.03
SIN3A-202ENST00000394947 COL5A1P20908 1838 aaPredicted RBP8.63□□□□□ -1.03
SIN3A-202ENST00000394947 ACYP2P14621 99 aa8.62□□□□□ -1.03
SIN3A-202ENST00000394947 PHF5AQ7RTV0 110 aaKnown RBP8.62□□□□□ -1.03
SIN3A-202ENST00000394947 ZFHX2Q9C0A1 2572 aaPredicted RBP8.62□□□□□ -1.03
SIN3A-202ENST00000394947 Q96NJ1 140 aa8.61□□□□□ -1.03
SIN3A-202ENST00000394947 MDFIQ99750 246 aa8.6□□□□□ -1.03
SIN3A-202ENST00000394947 PTPRSQ13332 1948 aa8.6□□□□□ -1.03
SIN3A-202ENST00000394947 LINC00310P59036 64 aa8.59□□□□□ -1.03
SIN3A-202ENST00000394947 SPATA3Q8NHX4 192 aa8.59□□□□□ -1.03
SIN3A-202ENST00000394947 IGLV1-51P01701 117 aa8.57□□□□□ -1.04
SIN3A-202ENST00000394947 LINC00313P59037 77 aa8.57□□□□□ -1.04
SIN3A-202ENST00000394947 PTPN13Q12923 2485 aa8.56□□□□□ -1.04
SIN3A-202ENST00000394947 ST20-AS1Q8NBB2 130 aa8.55□□□□□ -1.04
SIN3A-202ENST00000394947 TYMSOSQ8TAI1 123 aa8.55□□□□□ -1.04
SIN3A-202ENST00000394947 LINC00167Q96N53 147 aa8.55□□□□□ -1.04
SIN3A-202ENST00000394947 COL4A4P53420 1690 aaPredicted RBP8.55□□□□□ -1.04
SIN3A-202ENST00000394947 AMELXQ99217 191 aa8.54□□□□□ -1.04
SIN3A-202ENST00000394947 HIVEP3Q5T1R4 2406 aa8.53□□□□□ -1.04
SIN3A-202ENST00000394947 CUL9Q8IWT3 2517 aa8.53□□□□□ -1.04
SIN3A-202ENST00000394947 C8orf87E5RJ46 101 aa8.53□□□□□ -1.04
SIN3A-202ENST00000394947 ADAMTS20P59510 1910 aa8.53□□□□□ -1.04
SIN3A-202ENST00000394947 COX6B2Q6YFQ2 88 aa8.52□□□□□ -1.05
SIN3A-202ENST00000394947 FHL3Q13643 280 aa8.52□□□□□ -1.05
SIN3A-202ENST00000394947 SONP18583 2426 aaKnown RBP8.52□□□□□ -1.05
SIN3A-202ENST00000394947 C9orf92A6NGG3 77 aa8.52□□□□□ -1.05
SIN3A-202ENST00000394947 CPAMD8Q8IZJ3 1885 aa8.51□□□□□ -1.05
SIN3A-202ENST00000394947 CXCL6P80162 114 aa8.51□□□□□ -1.05
SIN3A-202ENST00000394947 Q8N2B8 174 aa8.51□□□□□ -1.05
SIN3A-202ENST00000394947 PRO0628Q9UI54 55 aa8.5□□□□□ -1.05
SIN3A-202ENST00000394947 FAM218AQ96MZ4 157 aa8.5□□□□□ -1.05
SIN3A-202ENST00000394947 LINC01554Q52M75 96 aa8.5□□□□□ -1.05
SIN3A-202ENST00000394947 TM2D3Q9BRN9 247 aa8.5□□□□□ -1.05
SIN3A-202ENST00000394947 CNFNQ9BYD5 112 aa8.49□□□□□ -1.05
SIN3A-202ENST00000394947 CDIP1Q9H305 208 aa8.49□□□□□ -1.05
SIN3A-202ENST00000394947 LINC00476Q8WZB0 136 aa8.49□□□□□ -1.05
SIN3A-202ENST00000394947 C16orf90A8MZG2 172 aa8.49□□□□□ -1.05
SIN3A-202ENST00000394947 J3QL48 77 aa8.49□□□□□ -1.05
SIN3A-202ENST00000394947 IGLV6-57P01721 117 aa8.49□□□□□ -1.05
SIN3A-202ENST00000394947 FAM229AH3BQW9 127 aa8.49□□□□□ -1.05
SIN3A-202ENST00000394947 A0A096LNJ9 63 aa8.48□□□□□ -1.05
SIN3A-202ENST00000394947 RTL8CO15255 209 aa8.48□□□□□ -1.05
SIN3A-202ENST00000394947 VPREB1P12018 145 aa8.47□□□□□ -1.05
SIN3A-202ENST00000394947 FAM168BA1KXE4 195 aa8.47□□□□□ -1.05
SIN3A-202ENST00000394947 EPM2AB3EWF7 344 aa8.47□□□□□ -1.05
SIN3A-202ENST00000394947 MUC6Q6W4X9 2439 aa8.46□□□□□ -1.05
SIN3A-202ENST00000394947 LINC01600Q96MT4 127 aa8.46□□□□□ -1.05
SIN3A-202ENST00000394947 A0A0D9SG42 100 aa8.45□□□□□ -1.06
SIN3A-202ENST00000394947 A0A1B0GUV1 79 aa8.45□□□□□ -1.06
SIN3A-202ENST00000394947 NAV3Q8IVL0 2385 aa8.44□□□□□ -1.06
SIN3A-202ENST00000394947 LINC00315P59091 139 aa8.44□□□□□ -1.06
SIN3A-202ENST00000394947 FAM19A4Q96LR4 140 aa8.43□□□□□ -1.06
SIN3A-202ENST00000394947 C9orf129Q5T035 196 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms