RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 MIR7-3HGQ8N6C7 128 aa9.75□□□□□ -0.85
RNF41-202ENST00000394013 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.74□□□□□ -0.85
RNF41-202ENST00000394013 CIRBPQ14011 172 aaKnown RBP9.74□□□□□ -0.85
RNF41-202ENST00000394013 LYSTQ99698 3801 aa9.74□□□□□ -0.85
RNF41-202ENST00000394013 RPL13AP40429 203 aaKnown RBP9.74□□□□□ -0.85
RNF41-202ENST00000394013 MDFIQ99750 246 aa9.74□□□□□ -0.85
RNF41-202ENST00000394013 LELP1Q5T871 98 aa9.73□□□□□ -0.85
RNF41-202ENST00000394013 K7EIL1 84 aa9.73□□□□□ -0.85
RNF41-202ENST00000394013 LINC00158P58513 81 aa9.73□□□□□ -0.85
RNF41-202ENST00000394013 DEFB121Q5J5C9 76 aa9.73□□□□□ -0.85
RNF41-202ENST00000394013 STAB2Q8WWQ8 2551 aa9.73□□□□□ -0.85
RNF41-202ENST00000394013 C6orf226Q5I0X4 101 aa9.72□□□□□ -0.85
RNF41-202ENST00000394013 C9orf116Q5BN46 136 aaPredicted RBP9.72□□□□□ -0.85
RNF41-202ENST00000394013 CLEC2BQ92478 149 aa9.72□□□□□ -0.85
RNF41-202ENST00000394013 C6orf223Q8N319 242 aa9.71□□□□□ -0.85
RNF41-202ENST00000394013 ENHOQ6UWT2 76 aa9.71□□□□□ -0.86
RNF41-202ENST00000394013 IFITM1P13164 125 aa9.7□□□□□ -0.86
RNF41-202ENST00000394013 HERV-K104P63124 156 aa9.7□□□□□ -0.86
RNF41-202ENST00000394013 GAGE12HA6NDE8 117 aa9.7□□□□□ -0.86
RNF41-202ENST00000394013 F8W1H4 67 aa9.7□□□□□ -0.86
RNF41-202ENST00000394013 FOXI1Q12951 378 aa9.7□□□□□ -0.86
RNF41-202ENST00000394013 ESRGQ1W209 222 aa9.7□□□□□ -0.86
RNF41-202ENST00000394013 C11orf45Q8TAV5 145 aa9.7□□□□□ -0.86
RNF41-202ENST00000394013 KIAA0087Q14695 138 aa9.69□□□□□ -0.86
RNF41-202ENST00000394013 CD164L2Q6UWJ8 174 aa9.69□□□□□ -0.86
RNF41-202ENST00000394013 DEFB131BA0A096LNP1 70 aa9.68□□□□□ -0.86
RNF41-202ENST00000394013 COX7A2LO14548 114 aa9.68□□□□□ -0.86
RNF41-202ENST00000394013 UBE2WQ96B02 151 aa9.68□□□□□ -0.86
RNF41-202ENST00000394013 IGKV2-28A0A075B6P5 120 aa9.67□□□□□ -0.86
RNF41-202ENST00000394013 IGKV2D-28P01615 120 aa9.67□□□□□ -0.86
RNF41-202ENST00000394013 CCL18P55774 89 aa9.67□□□□□ -0.86
RNF41-202ENST00000394013 C10orf25Q5T742 122 aa9.67□□□□□ -0.86
RNF41-202ENST00000394013 C9JAW5 83 aa9.66□□□□□ -0.86
RNF41-202ENST00000394013 MALP21145 153 aa9.66□□□□□ -0.86
RNF41-202ENST00000394013 LINC00337Q8N6G1 96 aa9.66□□□□□ -0.86
RNF41-202ENST00000394013 PRR3P79522 188 aaKnown RBP9.66□□□□□ -0.86
RNF41-202ENST00000394013 DNAH9Q9NYC9 4486 aa9.66□□□□□ -0.86
RNF41-202ENST00000394013 TRBV30A0A0K0K1B3 111 aa9.65□□□□□ -0.86
RNF41-202ENST00000394013 SND1-IT1Q9HBX3 110 aa9.65□□□□□ -0.86
RNF41-202ENST00000394013 Q8IZM0 81 aa9.65□□□□□ -0.86
RNF41-202ENST00000394013 K7ERU9 68 aa9.64□□□□□ -0.87
RNF41-202ENST00000394013 VPS25Q9BRG1 176 aa9.64□□□□□ -0.87
RNF41-202ENST00000394013 PRR34Q9NV39 138 aa9.64□□□□□ -0.87
RNF41-202ENST00000394013 CKS1BP61024 79 aa9.64□□□□□ -0.87
RNF41-202ENST00000394013 UNQ6190/PRO20217Q6UXQ8 127 aa9.64□□□□□ -0.87
RNF41-202ENST00000394013 TRBV20-1A0A075B6N2 111 aa9.63□□□□□ -0.87
RNF41-202ENST00000394013 TENM2Q9NT68 2774 aa9.63□□□□□ -0.87
RNF41-202ENST00000394013 IBA57-AS1B1ANH7 110 aa9.63□□□□□ -0.87
RNF41-202ENST00000394013 Q8NDZ9 215 aa9.63□□□□□ -0.87
RNF41-202ENST00000394013 LYRM7Q5U5X0 104 aa9.62□□□□□ -0.87
RNF41-202ENST00000394013 LINC01620Q4KN68 170 aa9.62□□□□□ -0.87
RNF41-202ENST00000394013 CARD19Q96LW7 228 aa9.62□□□□□ -0.87
RNF41-202ENST00000394013 SLC25A20O43772 301 aa9.61□□□□□ -0.87
RNF41-202ENST00000394013 ANKRD29Q8N6D5 301 aa9.61□□□□□ -0.87
RNF41-202ENST00000394013 TM2D3Q9BRN9 247 aa9.61□□□□□ -0.87
RNF41-202ENST00000394013 SPAG11BQ08648 103 aa9.61□□□□□ -0.87
RNF41-202ENST00000394013 HIGD2BQ4VC39 106 aa9.61□□□□□ -0.87
RNF41-202ENST00000394013 CFAP161Q6P656 301 aa9.61□□□□□ -0.87
RNF41-202ENST00000394013 FAM218AQ96MZ4 157 aa9.6□□□□□ -0.87
RNF41-202ENST00000394013 CSMD3Q7Z407 3707 aa9.6□□□□□ -0.87
RNF41-202ENST00000394013 CRPP02741 224 aa9.6□□□□□ -0.87
RNF41-202ENST00000394013 ATXN8Q156A1 80 aa9.6□□□□□ -0.87
RNF41-202ENST00000394013 SPATA25Q9BR10 227 aa9.6□□□□□ -0.87
RNF41-202ENST00000394013 H3BNG1 76 aa9.59□□□□□ -0.87
RNF41-202ENST00000394013 DNHD1Q96M86 4753 aa9.58□□□□□ -0.88
RNF41-202ENST00000394013 DNAH10Q8IVF4 4471 aa9.58□□□□□ -0.88
RNF41-202ENST00000394013 KRTAP26-1Q6PEX3 210 aa9.58□□□□□ -0.88
RNF41-202ENST00000394013 DNAH1Q9P2D7 4330 aa9.57□□□□□ -0.88
RNF41-202ENST00000394013 DNAH7Q8WXX0 4024 aa9.57□□□□□ -0.88
RNF41-202ENST00000394013 Q9HAA7 133 aa9.57□□□□□ -0.88
RNF41-202ENST00000394013 LST1O00453 97 aa9.57□□□□□ -0.88
RNF41-202ENST00000394013 OR13C6PQ8NH95 151 aa9.57□□□□□ -0.88
RNF41-202ENST00000394013 SMIM11BQ8TCY0 68 aa9.57□□□□□ -0.88
RNF41-202ENST00000394013 LINC01561Q8N1V8 128 aa9.56□□□□□ -0.88
RNF41-202ENST00000394013 TRAV8-4A0A0B4J246 113 aa9.56□□□□□ -0.88
RNF41-202ENST00000394013 COX6CP09669 75 aa9.56□□□□□ -0.88
RNF41-202ENST00000394013 TEN1Q86WV5 123 aa9.55□□□□□ -0.88
RNF41-202ENST00000394013 NTN5Q8WTR8 489 aaPredicted RBP9.55□□□□□ -0.88
RNF41-202ENST00000394013 COPS9Q8WXC6 57 aa9.55□□□□□ -0.88
RNF41-202ENST00000394013 KLK5Q9Y337 293 aaPredicted RBP9.55□□□□□ -0.88
RNF41-202ENST00000394013 LINC00588Q9Y4M8 146 aa9.55□□□□□ -0.88
RNF41-202ENST00000394013 TEX49A0A1B0GTD5 131 aa9.55□□□□□ -0.88
RNF41-202ENST00000394013 PRKDCP78527 4128 aaKnown RBP9.55□□□□□ -0.88
RNF41-202ENST00000394013 NCR3O14931 201 aa9.54□□□□□ -0.88
RNF41-202ENST00000394013 C6orf48Q9UBA6 75 aa9.54□□□□□ -0.88
RNF41-202ENST00000394013 IGKV2D-24A0A075B6R9 120 aa9.53□□□□□ -0.88
RNF41-202ENST00000394013 TRAV13-2A0A0B4J235 113 aa9.53□□□□□ -0.88
RNF41-202ENST00000394013 TRAV10A0A0B4J240 114 aa9.53□□□□□ -0.88
RNF41-202ENST00000394013 TRBV10-2A0A0K0K1G8 114 aa9.53□□□□□ -0.88
RNF41-202ENST00000394013 CASC10Q5T4H9 136 aa9.53□□□□□ -0.88
RNF41-202ENST00000394013 C15orf56Q8N910 161 aa9.53□□□□□ -0.88
RNF41-202ENST00000394013 XAGE1AQ9HD64 81 aa9.53□□□□□ -0.88
RNF41-202ENST00000394013 A0A087WYN8 130 aa9.51□□□□□ -0.89
RNF41-202ENST00000394013 C21orf62-AS1Q17RA5 79 aa9.51□□□□□ -0.89
RNF41-202ENST00000394013 CXCL5P42830 114 aa9.5□□□□□ -0.89
RNF41-202ENST00000394013 LINC01556Q5JQF7 62 aa9.5□□□□□ -0.89
RNF41-202ENST00000394013 RPL28P46779 137 aaKnown RBP9.5□□□□□ -0.89
RNF41-202ENST00000394013 PPDPFLQ8WWR9 84 aa9.49□□□□□ -0.89
RNF41-202ENST00000394013 CBY1Q9Y3M2 126 aa9.49□□□□□ -0.89
RNF41-202ENST00000394013 PLECQ15149 4684 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms