RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 SMIM1B2RUZ4 78 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 NDUFA1O15239 70 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 NANOS2P60321 138 aaKnown RBP3.97□□□□□ -1.77
NPM1-203ENST00000393820 KRTAP10-6P60371 365 aaPredicted RBP3.97□□□□□ -1.77
NPM1-203ENST00000393820 LY6EQ16553 131 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 BRD3OSQ6XYD6 125 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 SMIM29Q86T20 159 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 LINC01006Q8NI28 216 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 DEFB104AQ8WTQ1 72 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 Q9HAA7 133 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 UBE2D4Q9Y2X8 147 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 MUC4Q99102 2169 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 NOTCH3Q9UM47 2321 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 TRAV12-2A0A075B6T6 113 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 IGHV3OR16-10A0A075B7F0 116 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 SPINK13Q1W4C9 94 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 KPRPQ5T749 579 aaPredicted RBP3.97□□□□□ -1.77
NPM1-203ENST00000393820 FAM19A3Q7Z5A8 133 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 CHCHD7Q9BUK0 85 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 TMEM126AQ9H061 195 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 SS18L2Q9UHA2 77 aa3.97□□□□□ -1.77
NPM1-203ENST00000393820 TRAV8-3A0A0A6YYJ7 113 aa3.96□□□□□ -1.78
NPM1-203ENST00000393820 A0A1B0GUV1 79 aa3.96□□□□□ -1.78
NPM1-203ENST00000393820 IGHV3-53P01767 116 aa3.96□□□□□ -1.78
NPM1-203ENST00000393820 ATP5G1P05496 136 aa3.96□□□□□ -1.78
NPM1-203ENST00000393820 HERVK_113P63121 156 aa3.96□□□□□ -1.78
NPM1-203ENST00000393820 TMEM101Q96IK0 257 aa3.96□□□□□ -1.78
NPM1-203ENST00000393820 VPREB3Q9UKI3 123 aa3.96□□□□□ -1.78
NPM1-203ENST00000393820 CSDC2Q9Y534 153 aaKnown RBP3.96□□□□□ -1.78
NPM1-203ENST00000393820 CCDC179H3BU77 68 aa3.95□□□□□ -1.78
NPM1-203ENST00000393820 COX7A2LO14548 114 aa3.95□□□□□ -1.78
NPM1-203ENST00000393820 IGKV3-20P01619 116 aa3.95□□□□□ -1.78
NPM1-203ENST00000393820 TRACP01848 142 aa3.95□□□□□ -1.78
NPM1-203ENST00000393820 SDIM1Q6ZPB5 146 aa3.95□□□□□ -1.78
NPM1-203ENST00000393820 LINC00643Q86TS7 51 aa3.95□□□□□ -1.78
NPM1-203ENST00000393820 Q8N9P0 234 aaPredicted RBP3.95□□□□□ -1.78
NPM1-203ENST00000393820 K7EQD1 137 aa3.94□□□□□ -1.78
NPM1-203ENST00000393820 CXCL5P42830 114 aa3.94□□□□□ -1.78
NPM1-203ENST00000393820 LCE1AQ5T7P2 110 aa3.94□□□□□ -1.78
NPM1-203ENST00000393820 FAM222AQ5U5X8 452 aa3.94□□□□□ -1.78
NPM1-203ENST00000393820 LINC00308Q8TCZ7 52 aa3.94□□□□□ -1.78
NPM1-203ENST00000393820 CLEC2BQ92478 149 aa3.94□□□□□ -1.78
NPM1-203ENST00000393820 UBE2E2Q96LR5 201 aa3.94□□□□□ -1.78
NPM1-203ENST00000393820 DUX3Q96PT4 197 aa3.94□□□□□ -1.78
NPM1-203ENST00000393820 CDKN2A-AS1Q9UH64 79 aa3.94□□□□□ -1.78
NPM1-203ENST00000393820 RS1O15537 224 aa3.93□□□□□ -1.78
NPM1-203ENST00000393820 SYNJ2BPP57105 145 aa3.93□□□□□ -1.78
NPM1-203ENST00000393820 LINC01547P58512 204 aaPredicted RBP3.93□□□□□ -1.78
NPM1-203ENST00000393820 SEC61GP60059 68 aa3.93□□□□□ -1.78
NPM1-203ENST00000393820 MEIG1Q5JSS6 88 aa3.93□□□□□ -1.78
NPM1-203ENST00000393820 CEMP1Q6PRD7 247 aaPredicted RBP3.93□□□□□ -1.78
NPM1-203ENST00000393820 DAND5Q8N907 189 aa3.93□□□□□ -1.78
NPM1-203ENST00000393820 COL7A1Q02388 2944 aa3.93□□□□□ -1.78
NPM1-203ENST00000393820 DNAH3Q8TD57 4116 aa3.93□□□□□ -1.78
NPM1-203ENST00000393820 RBMY1A1P0DJD3 496 aaKnown RBP3.93□□□□□ -1.78
NPM1-203ENST00000393820 RBMY1CP0DJD4 496 aa3.93□□□□□ -1.78
NPM1-203ENST00000393820 INAFM2P0DMQ5 153 aa3.93□□□□□ -1.78
NPM1-203ENST00000393820 KRTAP10-3P60369 221 aa3.93□□□□□ -1.78
NPM1-203ENST00000393820 RBMY1FQ15415 496 aaKnown RBP3.93□□□□□ -1.78
NPM1-203ENST00000393820 Q6ZRP5 223 aa3.93□□□□□ -1.78
NPM1-203ENST00000393820 KRTAP1-5Q9BYS1 174 aa3.93□□□□□ -1.78
NPM1-203ENST00000393820 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.92□□□□□ -1.78
NPM1-203ENST00000393820 IGHV3OR16-12A0A075B7B8 117 aa3.92□□□□□ -1.78
NPM1-203ENST00000393820 IGHV3-73A0A0B4J1V6 119 aa3.92□□□□□ -1.78
NPM1-203ENST00000393820 TRAV13-2A0A0B4J235 113 aa3.92□□□□□ -1.78
NPM1-203ENST00000393820 TRBV10-1A0A0K0K1A3 114 aa3.92□□□□□ -1.78
NPM1-203ENST00000393820 IGKV2-29A2NJV5 120 aaPredicted RBP3.92□□□□□ -1.78
NPM1-203ENST00000393820 BAALC-AS2P0C853 105 aa3.92□□□□□ -1.78
NPM1-203ENST00000393820 DEFB131AP59861 70 aa3.92□□□□□ -1.78
NPM1-203ENST00000393820 LINC00242Q5T6M2 205 aa3.92□□□□□ -1.78
NPM1-203ENST00000393820 C11orf72Q8NBR9 251 aa3.92□□□□□ -1.78
NPM1-203ENST00000393820 ZNF625Q96I27 306 aaPredicted RBP3.92□□□□□ -1.78
NPM1-203ENST00000393820 KNCNA6PVL3 124 aa3.91□□□□□ -1.78
NPM1-203ENST00000393820 HTN1P15515 57 aa3.91□□□□□ -1.78
NPM1-203ENST00000393820 RPL28P46779 137 aaKnown RBP3.91□□□□□ -1.78
NPM1-203ENST00000393820 COX6A2Q02221 97 aa3.91□□□□□ -1.78
NPM1-203ENST00000393820 DAZ2Q13117 558 aaKnown RBP3.91□□□□□ -1.78
NPM1-203ENST00000393820 RNASE13Q5GAN3 156 aaKnown RBP3.91□□□□□ -1.78
NPM1-203ENST00000393820 DAZ4Q86SG3 579 aaKnown RBP3.91□□□□□ -1.78
NPM1-203ENST00000393820 C5orf38Q86SI9 138 aa3.91□□□□□ -1.78
NPM1-203ENST00000393820 Q8N2B8 174 aa3.91□□□□□ -1.78
NPM1-203ENST00000393820 WFDC9Q8NEX5 89 aa3.91□□□□□ -1.78
NPM1-203ENST00000393820 LINC01587Q99440 93 aa3.91□□□□□ -1.78
NPM1-203ENST00000393820 CHCHD5Q9BSY4 110 aa3.91□□□□□ -1.78
NPM1-203ENST00000393820 DAZ3Q9NR90 486 aaKnown RBP3.91□□□□□ -1.78
NPM1-203ENST00000393820 STAB2Q8WWQ8 2551 aa3.9□□□□□ -1.78
NPM1-203ENST00000393820 IGHV3-38A0A0C4DH36 116 aa3.9□□□□□ -1.78
NPM1-203ENST00000393820 H0YGX0 51 aa3.9□□□□□ -1.78
NPM1-203ENST00000393820 UQCRQO14949 82 aa3.9□□□□□ -1.78
NPM1-203ENST00000393820 INSP01308 110 aa3.9□□□□□ -1.78
NPM1-203ENST00000393820 NPC2P61916 151 aa3.9□□□□□ -1.78
NPM1-203ENST00000393820 RPL36AP83881 106 aaKnown RBP3.9□□□□□ -1.78
NPM1-203ENST00000393820 SMIM20Q8N5G0 67 aa3.9□□□□□ -1.78
NPM1-203ENST00000393820 C3orf22Q8N5N4 141 aa3.9□□□□□ -1.78
NPM1-203ENST00000393820 LINC00526Q96FQ7 95 aa3.9□□□□□ -1.78
NPM1-203ENST00000393820 RBMY1BA6NDE4 496 aaKnown RBP3.89□□□□□ -1.79
NPM1-203ENST00000393820 RBMY1EA6NEQ0 496 aaKnown RBP3.89□□□□□ -1.79
NPM1-203ENST00000393820 F5H768 121 aa3.89□□□□□ -1.79
NPM1-203ENST00000393820 RBMY1DP0C7P1 496 aaKnown RBP3.89□□□□□ -1.79
NPM1-203ENST00000393820 LINC01561Q8N1V8 128 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms