RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 LINC00269Q8N2A0 174 aa11.36□□□□□ -0.59
PDZD4-202ENST00000393758 MXRA5Q9NR99 2828 aa11.36□□□□□ -0.59
PDZD4-202ENST00000393758 TRAV25A0A0B4J276 109 aa11.36□□□□□ -0.59
PDZD4-202ENST00000393758 C9orf116Q5BN46 136 aaPredicted RBP11.36□□□□□ -0.59
PDZD4-202ENST00000393758 CSDC2Q9Y534 153 aaKnown RBP11.35□□□□□ -0.59
PDZD4-202ENST00000393758 LINC00959A0A1B0GUT2 108 aa11.35□□□□□ -0.59
PDZD4-202ENST00000393758 FAM110AQ9BQ89 295 aa11.35□□□□□ -0.59
PDZD4-202ENST00000393758 ITPR3Q14573 2671 aa11.35□□□□□ -0.59
PDZD4-202ENST00000393758 IGKV2-28A0A075B6P5 120 aa11.35□□□□□ -0.59
PDZD4-202ENST00000393758 IGKV2D-28P01615 120 aa11.35□□□□□ -0.59
PDZD4-202ENST00000393758 C9orf129Q5T035 196 aaKnown RBP11.35□□□□□ -0.59
PDZD4-202ENST00000393758 TRBV6-4A0A1B0GX49 114 aa11.34□□□□□ -0.59
PDZD4-202ENST00000393758 CMC4P56277 68 aaPredicted RBP11.34□□□□□ -0.59
PDZD4-202ENST00000393758 FAM222AQ5U5X8 452 aa11.34□□□□□ -0.59
PDZD4-202ENST00000393758 USP17L23D6RBM5 183 aa11.33□□□□□ -0.59
PDZD4-202ENST00000393758 DEFB121Q5J5C9 76 aa11.33□□□□□ -0.6
PDZD4-202ENST00000393758 ENHOQ6UWT2 76 aa11.33□□□□□ -0.6
PDZD4-202ENST00000393758 J3KT08 172 aa11.33□□□□□ -0.6
PDZD4-202ENST00000393758 RPL18AQ02543 176 aaKnown RBP11.33□□□□□ -0.6
PDZD4-202ENST00000393758 C6orf99Q4VX62 202 aa11.32□□□□□ -0.6
PDZD4-202ENST00000393758 GHRHP01286 108 aa11.32□□□□□ -0.6
PDZD4-202ENST00000393758 BBC3Q96PG8 261 aaPredicted RBP11.31□□□□□ -0.6
PDZD4-202ENST00000393758 A8MTW9 85 aa11.31□□□□□ -0.6
PDZD4-202ENST00000393758 ZFHX3Q15911 3703 aa11.31□□□□□ -0.6
PDZD4-202ENST00000393758 HILS1P60008 231 aa11.3□□□□□ -0.6
PDZD4-202ENST00000393758 DSCR8Q96T75 97 aa11.3□□□□□ -0.6
PDZD4-202ENST00000393758 IGHV3OR16-9A0A0B4J2B5 98 aa11.3□□□□□ -0.6
PDZD4-202ENST00000393758 C20orf197Q8N268 126 aa11.29□□□□□ -0.6
PDZD4-202ENST00000393758 DEFB135Q30KP9 77 aa11.29□□□□□ -0.6
PDZD4-202ENST00000393758 A0A087WZ39 114 aa11.29□□□□□ -0.6
PDZD4-202ENST00000393758 LINC00482Q8N8I6 264 aa11.28□□□□□ -0.6
PDZD4-202ENST00000393758 DAD1P61803 113 aa11.28□□□□□ -0.6
PDZD4-202ENST00000393758 FHL2Q14192 279 aa11.28□□□□□ -0.6
PDZD4-202ENST00000393758 CHCHD10Q8WYQ3 142 aaPredicted RBP11.27□□□□□ -0.61
PDZD4-202ENST00000393758 JMJD7-PLA2G4BH0Y9G9 81 aa11.26□□□□□ -0.61
PDZD4-202ENST00000393758 TMEM256-PLSCR3K7ERE1 68 aa11.26□□□□□ -0.61
PDZD4-202ENST00000393758 SERP2Q8N6R1 65 aa11.26□□□□□ -0.61
PDZD4-202ENST00000393758 SCXQ7RTU7 201 aa11.26□□□□□ -0.61
PDZD4-202ENST00000393758 FAM19A1Q7Z5A9 133 aa11.26□□□□□ -0.61
PDZD4-202ENST00000393758 LINC01006Q8NI28 216 aa11.26□□□□□ -0.61
PDZD4-202ENST00000393758 XAGE1AQ9HD64 81 aa11.25□□□□□ -0.61
PDZD4-202ENST00000393758 PRO0255Q9UI72 69 aa11.25□□□□□ -0.61
PDZD4-202ENST00000393758 KLK12Q9UKR0 248 aa11.25□□□□□ -0.61
PDZD4-202ENST00000393758 RBM3P98179 157 aaKnown RBP11.24□□□□□ -0.61
PDZD4-202ENST00000393758 SPAG11BQ08648 103 aa11.24□□□□□ -0.61
PDZD4-202ENST00000393758 UPK3BQ9BT76 320 aa11.24□□□□□ -0.61
PDZD4-202ENST00000393758 REG3AQ06141 175 aa11.24□□□□□ -0.61
PDZD4-202ENST00000393758 Q6JHZ5 121 aa11.23□□□□□ -0.61
PDZD4-202ENST00000393758 Q8N3U1 123 aa11.23□□□□□ -0.61
PDZD4-202ENST00000393758 FAM19A5Q7Z5A7 132 aaPredicted RBP11.23□□□□□ -0.61
PDZD4-202ENST00000393758 F8P00451 2351 aa11.23□□□□□ -0.61
PDZD4-202ENST00000393758 FASNP49327 2511 aaKnown RBP11.22□□□□□ -0.61
PDZD4-202ENST00000393758 KIR2DL5BQ8NHK3 375 aa11.22□□□□□ -0.61
PDZD4-202ENST00000393758 CSMD2Q7Z408 3487 aa11.22□□□□□ -0.61
PDZD4-202ENST00000393758 VPS13CQ709C8 3753 aa11.21□□□□□ -0.61
PDZD4-202ENST00000393758 Q8N814 137 aa11.21□□□□□ -0.61
PDZD4-202ENST00000393758 LINC01600Q96MT4 127 aa11.21□□□□□ -0.61
PDZD4-202ENST00000393758 NIPBLQ6KC79 2804 aaeCLIP11.21□□□□□ -0.62
PDZD4-202ENST00000393758 CCKP06307 115 aa11.2□□□□□ -0.62
PDZD4-202ENST00000393758 UNQ6190/PRO20217Q6UXQ8 127 aa11.2□□□□□ -0.62
PDZD4-202ENST00000393758 C6orf223Q8N319 242 aa11.2□□□□□ -0.62
PDZD4-202ENST00000393758 Q6ZQY7 126 aa11.19□□□□□ -0.62
PDZD4-202ENST00000393758 A0A096LNT2 108 aa11.19□□□□□ -0.62
PDZD4-202ENST00000393758 SETXQ7Z333 2677 aaKnown RBP11.19□□□□□ -0.62
PDZD4-202ENST00000393758 Q8IZM0 81 aa11.18□□□□□ -0.62
PDZD4-202ENST00000393758 GIG44P09565 113 aaPredicted RBP11.17□□□□□ -0.62
PDZD4-202ENST00000393758 ZNF561-AS1K7EIQ3 104 aa11.17□□□□□ -0.62
PDZD4-202ENST00000393758 HIGD2BQ4VC39 106 aa11.17□□□□□ -0.62
PDZD4-202ENST00000393758 IGLV1-51P01701 117 aa11.16□□□□□ -0.62
PDZD4-202ENST00000393758 SNURFQ9Y675 71 aa11.16□□□□□ -0.62
PDZD4-202ENST00000393758 HECTD1Q9ULT8 2610 aa11.16□□□□□ -0.62
PDZD4-202ENST00000393758 FSHBP01225 129 aa11.16□□□□□ -0.62
PDZD4-202ENST00000393758 CD164L2Q6UWJ8 174 aa11.16□□□□□ -0.62
PDZD4-202ENST00000393758 DEFB105AQ8NG35 78 aa11.16□□□□□ -0.62
PDZD4-202ENST00000393758 ATRQ13535 2644 aa11.15□□□□□ -0.62
PDZD4-202ENST00000393758 LINC01561Q8N1V8 128 aa11.15□□□□□ -0.63
PDZD4-202ENST00000393758 C22orf24Q9Y442 160 aa11.15□□□□□ -0.63
PDZD4-202ENST00000393758 PLAC8L1A1L4L8 177 aa11.14□□□□□ -0.63
PDZD4-202ENST00000393758 CRYGAP11844 174 aa11.13□□□□□ -0.63
PDZD4-202ENST00000393758 TMEM258P61165 79 aa11.13□□□□□ -0.63
PDZD4-202ENST00000393758 CR1P17927 2039 aa11.13□□□□□ -0.63
PDZD4-202ENST00000393758 FAM19A3Q7Z5A8 133 aa11.13□□□□□ -0.63
PDZD4-202ENST00000393758 IL17DQ8TAD2 202 aa11.12□□□□□ -0.63
PDZD4-202ENST00000393758 CYSRT1A8MQ03 144 aa11.12□□□□□ -0.63
PDZD4-202ENST00000393758 CAMK2N2Q96S95 79 aa11.11□□□□□ -0.63
PDZD4-202ENST00000393758 USP24Q9UPU5 2620 aa11.11□□□□□ -0.63
PDZD4-202ENST00000393758 SMIM9A6NGZ8 99 aa11.11□□□□□ -0.63
PDZD4-202ENST00000393758 ZNF843Q8N446 348 aa11.11□□□□□ -0.63
PDZD4-202ENST00000393758 HRCT1Q6UXD1 115 aa11.11□□□□□ -0.63
PDZD4-202ENST00000393758 CYSTM1Q9H1C7 97 aa11.11□□□□□ -0.63
PDZD4-202ENST00000393758 C10orf25Q5T742 122 aa11.1□□□□□ -0.63
PDZD4-202ENST00000393758 DIRC1Q969H9 104 aa11.1□□□□□ -0.63
PDZD4-202ENST00000393758 SMR3AQ99954 134 aa11.1□□□□□ -0.63
PDZD4-202ENST00000393758 UNC79Q9P2D8 2635 aa11.1□□□□□ -0.63
PDZD4-202ENST00000393758 IGHV4-28A0A0C4DH34 117 aa11.1□□□□□ -0.63
PDZD4-202ENST00000393758 APCP25054 2843 aa11.09□□□□□ -0.63
PDZD4-202ENST00000393758 TRBV10-3A0A0K0K1G6 114 aa11.07□□□□□ -0.64
PDZD4-202ENST00000393758 C2orf48Q96LS8 159 aa11.07□□□□□ -0.64
PDZD4-202ENST00000393758 C5orf47Q569G3 176 aa11.06□□□□□ -0.64
PDZD4-202ENST00000393758 FAM236DA0A1B0GTK5 79 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms