RNA–Protein interactions for RNA: ENST00000393412.7

MDM2-209, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 1,404 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-209ENST00000393412 C6orf48Q9UBA6 75 aa9.94□□□□□ -0.82
MDM2-209ENST00000393412 C9orf116Q5BN46 136 aaPredicted RBP9.93□□□□□ -0.82
MDM2-209ENST00000393412 TRBV30A0A0K0K1B3 111 aa9.92□□□□□ -0.82
MDM2-209ENST00000393412 MRPL18Q9H0U6 180 aaKnown RBP9.92□□□□□ -0.82
MDM2-209ENST00000393412 HERVK_113P63121 156 aa9.91□□□□□ -0.82
MDM2-209ENST00000393412 FABP9Q0Z7S8 132 aa9.91□□□□□ -0.82
MDM2-209ENST00000393412 SCGB3A1Q96QR1 104 aa9.91□□□□□ -0.82
MDM2-209ENST00000393412 SMCO4Q9NRQ5 59 aa9.9□□□□□ -0.82
MDM2-209ENST00000393412 SCO1O75880 301 aa9.9□□□□□ -0.83
MDM2-209ENST00000393412 C2orf82Q6UX34 121 aa9.9□□□□□ -0.83
MDM2-209ENST00000393412 CBLN2Q8IUK8 224 aa9.9□□□□□ -0.83
MDM2-209ENST00000393412 PRSS2P07478 247 aa9.89□□□□□ -0.83
MDM2-209ENST00000393412 SRSF9Q13242 221 aaKnown RBP eCLIP9.89□□□□□ -0.83
MDM2-209ENST00000393412 Q8IZM0 81 aa9.89□□□□□ -0.83
MDM2-209ENST00000393412 PACRGQ96M98 296 aaPredicted RBP9.89□□□□□ -0.83
MDM2-209ENST00000393412 GEMIN7Q9H840 131 aaKnown RBP9.89□□□□□ -0.83
MDM2-209ENST00000393412 CDKN2A-AS1Q9UH64 79 aa9.89□□□□□ -0.83
MDM2-209ENST00000393412 NDUFC2-KCTD14E9PQ53 114 aa9.88□□□□□ -0.83
MDM2-209ENST00000393412 FA2HQ7L5A8 372 aa9.88□□□□□ -0.83
MDM2-209ENST00000393412 CKS1BP61024 79 aa9.87□□□□□ -0.83
MDM2-209ENST00000393412 ODF1Q14990 250 aa9.87□□□□□ -0.83
MDM2-209ENST00000393412 C6orf226Q5I0X4 101 aa9.87□□□□□ -0.83
MDM2-209ENST00000393412 TINCRA0A1B0GVN0 87 aa9.86□□□□□ -0.83
MDM2-209ENST00000393412 KRTAP10-8P60410 259 aa9.86□□□□□ -0.83
MDM2-209ENST00000393412 GAGE2EQ4V326 116 aa9.86□□□□□ -0.83
MDM2-209ENST00000393412 CST9LQ9H4G1 147 aa9.86□□□□□ -0.83
MDM2-209ENST00000393412 GAGE2DQ9UEU5 116 aa9.86□□□□□ -0.83
MDM2-209ENST00000393412 IGLV5-45A0A087WSX0 123 aa9.85□□□□□ -0.83
MDM2-209ENST00000393412 PHF5AQ7RTV0 110 aaKnown RBP9.85□□□□□ -0.83
MDM2-209ENST00000393412 YPEL4Q96NS1 127 aa9.85□□□□□ -0.83
MDM2-209ENST00000393412 TOMM7Q9P0U1 55 aa9.85□□□□□ -0.83
MDM2-209ENST00000393412 PSORS1C2Q9UIG4 136 aa9.85□□□□□ -0.83
MDM2-209ENST00000393412 TRAPPC1Q9Y5R8 145 aa9.85□□□□□ -0.83
MDM2-209ENST00000393412 FAM168BA1KXE4 195 aa9.84□□□□□ -0.83
MDM2-209ENST00000393412 PMVKQ15126 192 aa9.84□□□□□ -0.83
MDM2-209ENST00000393412 C1orf137Q5JT78 98 aa9.84□□□□□ -0.83
MDM2-209ENST00000393412 TNXBP22105 4242 aa9.83□□□□□ -0.84
MDM2-209ENST00000393412 LINC00469Q8N7U9 141 aa9.83□□□□□ -0.84
MDM2-209ENST00000393412 C18orf32Q8TCD1 76 aa9.83□□□□□ -0.84
MDM2-209ENST00000393412 SMIM1B2RUZ4 78 aa9.82□□□□□ -0.84
MDM2-209ENST00000393412 F8VRH5 84 aa9.82□□□□□ -0.84
MDM2-209ENST00000393412 CXCL5P42830 114 aa9.82□□□□□ -0.84
MDM2-209ENST00000393412 PDZD11Q5EBL8 140 aa9.82□□□□□ -0.84
MDM2-209ENST00000393412 KRTAP7-1Q8IUC3 87 aa9.82□□□□□ -0.84
MDM2-209ENST00000393412 LINC00614P0C842 121 aa9.82□□□□□ -0.84
MDM2-209ENST00000393412 C9orf129Q5T035 196 aaKnown RBP9.82□□□□□ -0.84
MDM2-209ENST00000393412 FAM19A5Q7Z5A7 132 aaPredicted RBP9.82□□□□□ -0.84
MDM2-209ENST00000393412 A0A096LNJ9 63 aa9.81□□□□□ -0.84
MDM2-209ENST00000393412 COLCA2A8K830 154 aa9.81□□□□□ -0.84
MDM2-209ENST00000393412 URB1-AS1Q96HZ7 61 aa9.81□□□□□ -0.84
MDM2-209ENST00000393412 RAB5BP61020 215 aa9.79□□□□□ -0.84
MDM2-209ENST00000393412 COX7B2Q8TF08 81 aa9.79□□□□□ -0.84
MDM2-209ENST00000393412 DIRC1Q969H9 104 aa9.79□□□□□ -0.84
MDM2-209ENST00000393412 M0QXV9 152 aa9.78□□□□□ -0.84
MDM2-209ENST00000393412 HBDP02042 147 aa9.78□□□□□ -0.84
MDM2-209ENST00000393412 KRTAP11-1Q8IUC1 163 aa9.78□□□□□ -0.84
MDM2-209ENST00000393412 H3BRM9 83 aa9.77□□□□□ -0.85
MDM2-209ENST00000393412 IGLV7-43P04211 117 aa9.77□□□□□ -0.85
MDM2-209ENST00000393412 IGLC3P0DOY3 106 aa9.77□□□□□ -0.85
MDM2-209ENST00000393412 ATP5LO75964 103 aa9.75□□□□□ -0.85
MDM2-209ENST00000393412 SPINK8P0C7L1 97 aa9.75□□□□□ -0.85
MDM2-209ENST00000393412 UBE2BP63146 152 aa9.74□□□□□ -0.85
MDM2-209ENST00000393412 XAGE1AQ9HD64 81 aa9.74□□□□□ -0.85
MDM2-209ENST00000393412 IGLV5-39A0A0G2JS06 123 aa9.73□□□□□ -0.85
MDM2-209ENST00000393412 NDUFA6P56556 154 aa9.73□□□□□ -0.85
MDM2-209ENST00000393412 PMCHL1Q16048 86 aa9.73□□□□□ -0.85
MDM2-209ENST00000393412 LRP2P98164 4655 aa9.73□□□□□ -0.85
MDM2-209ENST00000393412 LBHQ53QV2 105 aaPredicted RBP9.73□□□□□ -0.85
MDM2-209ENST00000393412 TP73-AS1Q9UF72 201 aa9.73□□□□□ -0.85
MDM2-209ENST00000393412 C22orf24Q9Y442 160 aa9.73□□□□□ -0.85
MDM2-209ENST00000393412 TRGC2P03986 189 aa9.72□□□□□ -0.85
MDM2-209ENST00000393412 ZNF22P17026 224 aaPredicted RBP9.72□□□□□ -0.85
MDM2-209ENST00000393412 PRR26Q8N8Z3 221 aa9.72□□□□□ -0.85
MDM2-209ENST00000393412 CHCHD1Q96BP2 118 aaKnown RBP9.72□□□□□ -0.85
MDM2-209ENST00000393412 H0Y9J4 135 aa9.71□□□□□ -0.86
MDM2-209ENST00000393412 BAGE3Q86Y29 109 aa9.7□□□□□ -0.86
MDM2-209ENST00000393412 MRPL55Q7Z7F7 128 aaKnown RBP9.68□□□□□ -0.86
MDM2-209ENST00000393412 IGLV1-50A0A075B6I6 118 aa9.67□□□□□ -0.86
MDM2-209ENST00000393412 C11orf86A6NJI1 115 aa9.67□□□□□ -0.86
MDM2-209ENST00000393412 NUPR1O60356 82 aa9.67□□□□□ -0.86
MDM2-209ENST00000393412 TRAV12-1A0A0B4J245 112 aa9.66□□□□□ -0.86
MDM2-209ENST00000393412 SFTA2Q6UW10 78 aa9.66□□□□□ -0.86
MDM2-209ENST00000393412 RNF213Q63HN8 5207 aa9.66□□□□□ -0.86
MDM2-209ENST00000393412 IGLV5-37A0A075B6J1 123 aa9.65□□□□□ -0.86
MDM2-209ENST00000393412 IFI27L1Q96BM0 104 aa9.65□□□□□ -0.86
MDM2-209ENST00000393412 CHTOPQ9Y3Y2 248 aaKnown RBP9.65□□□□□ -0.86
MDM2-209ENST00000393412 ZNF861PO60384 105 aa9.65□□□□□ -0.87
MDM2-209ENST00000393412 COX17Q14061 63 aa9.65□□□□□ -0.87
MDM2-209ENST00000393412 TMEM170BQ5T4T1 132 aa9.65□□□□□ -0.87
MDM2-209ENST00000393412 RPL13AP40429 203 aaKnown RBP9.64□□□□□ -0.87
MDM2-209ENST00000393412 LINC00167Q96N53 147 aa9.63□□□□□ -0.87
MDM2-209ENST00000393412 ERG28Q9UKR5 140 aa9.63□□□□□ -0.87
MDM2-209ENST00000393412 HSBP1O75506 76 aa9.62□□□□□ -0.87
MDM2-209ENST00000393412 KRTAP1-4P0C5Y4 121 aa9.62□□□□□ -0.87
MDM2-209ENST00000393412 PFN2P35080 140 aa9.62□□□□□ -0.87
MDM2-209ENST00000393412 ZNF625Q96I27 306 aaPredicted RBP9.62□□□□□ -0.87
MDM2-209ENST00000393412 BCE1O60756 84 aa9.61□□□□□ -0.87
MDM2-209ENST00000393412 NKAPP1Q8N9T2 125 aa9.61□□□□□ -0.87
MDM2-209ENST00000393412 SND1-IT1Q9HBX3 110 aa9.61□□□□□ -0.87
MDM2-209ENST00000393412 TMEM223A0PJW6 202 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms