RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 C18orf65Q6ZTR6 163 aa5.91□□□□□ -1.46
LIMS1-203ENST00000393310 MAPKAPK5-AS1Q8N8E1 139 aa5.91□□□□□ -1.46
LIMS1-203ENST00000393310 A0A0J9YY99 117 aa5.9□□□□□ -1.46
LIMS1-203ENST00000393310 M0R378 163 aa5.9□□□□□ -1.46
LIMS1-203ENST00000393310 ZNF22P17026 224 aaPredicted RBP5.9□□□□□ -1.46
LIMS1-203ENST00000393310 LIMD2Q9BT23 127 aa5.9□□□□□ -1.46
LIMS1-203ENST00000393310 LEPROTO15243 131 aa5.9□□□□□ -1.46
LIMS1-203ENST00000393310 PRR32B1ATL7 298 aa5.9□□□□□ -1.47
LIMS1-203ENST00000393310 IGLV3-1P01715 115 aa5.9□□□□□ -1.47
LIMS1-203ENST00000393310 TEX15Q9BXT5 2789 aa5.9□□□□□ -1.47
LIMS1-203ENST00000393310 OPRPNQ99935 248 aaPredicted RBP5.9□□□□□ -1.47
LIMS1-203ENST00000393310 IGLV11-55A0A075B6I3 123 aa5.89□□□□□ -1.47
LIMS1-203ENST00000393310 KRTAP10-3P60369 221 aa5.89□□□□□ -1.47
LIMS1-203ENST00000393310 LINC00310P59036 64 aa5.89□□□□□ -1.47
LIMS1-203ENST00000393310 Q6ZS46 218 aa5.89□□□□□ -1.47
LIMS1-203ENST00000393310 TMEM263Q8WUH6 116 aaKnown RBP5.89□□□□□ -1.47
LIMS1-203ENST00000393310 MSRB1Q9NZV6 116 aa5.89□□□□□ -1.47
LIMS1-203ENST00000393310 IGKV1-16P04430 117 aa5.89□□□□□ -1.47
LIMS1-203ENST00000393310 JMJD7-PLA2G4BH0Y9G9 81 aa5.88□□□□□ -1.47
LIMS1-203ENST00000393310 LINC00205P59089 165 aa5.88□□□□□ -1.47
LIMS1-203ENST00000393310 UBE2D3P61077 147 aa5.88□□□□□ -1.47
LIMS1-203ENST00000393310 UBE2D2P62837 147 aa5.88□□□□□ -1.47
LIMS1-203ENST00000393310 LINC01554Q52M75 96 aa5.88□□□□□ -1.47
LIMS1-203ENST00000393310 REG3GQ6UW15 175 aa5.88□□□□□ -1.47
LIMS1-203ENST00000393310 RNASE13Q5GAN3 156 aaKnown RBP5.88□□□□□ -1.47
LIMS1-203ENST00000393310 NOP10Q9NPE3 64 aaKnown RBP5.88□□□□□ -1.47
LIMS1-203ENST00000393310 TRBV30A0A0K0K1B3 111 aa5.88□□□□□ -1.47
LIMS1-203ENST00000393310 NBDYA0A0U1RRE5 68 aa5.88□□□□□ -1.47
LIMS1-203ENST00000393310 HCG22E2RYF7 251 aa5.88□□□□□ -1.47
LIMS1-203ENST00000393310 RNASE4P34096 147 aaKnown RBP5.88□□□□□ -1.47
LIMS1-203ENST00000393310 IGKV1OR2-108A0A075B7D4 117 aa5.88□□□□□ -1.47
LIMS1-203ENST00000393310 A0A1B0GXF2 115 aa5.88□□□□□ -1.47
LIMS1-203ENST00000393310 ENHOQ6UWT2 76 aa5.88□□□□□ -1.47
LIMS1-203ENST00000393310 LRCOL1A6NCL2 159 aa5.87□□□□□ -1.47
LIMS1-203ENST00000393310 BCE1O60756 84 aa5.87□□□□□ -1.47
LIMS1-203ENST00000393310 SPINK13Q1W4C9 94 aa5.87□□□□□ -1.47
LIMS1-203ENST00000393310 Q8N8P6 123 aa5.87□□□□□ -1.47
LIMS1-203ENST00000393310 ITPR2Q14571 2701 aa5.87□□□□□ -1.47
LIMS1-203ENST00000393310 ARHGAP32A7KAX9 2087 aa5.87□□□□□ -1.47
LIMS1-203ENST00000393310 Q6ZTC4 211 aa5.87□□□□□ -1.47
LIMS1-203ENST00000393310 PLXNB1O43157 2135 aa5.87□□□□□ -1.47
LIMS1-203ENST00000393310 SRRM4A7MD48 611 aaKnown RBP5.87□□□□□ -1.47
LIMS1-203ENST00000393310 NDUFB1O75438 58 aa5.87□□□□□ -1.47
LIMS1-203ENST00000393310 CYYR1Q96J86 154 aa5.87□□□□□ -1.47
LIMS1-203ENST00000393310 TRBV10-3A0A0K0K1G6 114 aa5.86□□□□□ -1.47
LIMS1-203ENST00000393310 ZNF80P51504 273 aaPredicted RBP5.86□□□□□ -1.47
LIMS1-203ENST00000393310 LINC00474Q9P2X8 69 aa5.86□□□□□ -1.47
LIMS1-203ENST00000393310 CR1P17927 2039 aa5.86□□□□□ -1.47
LIMS1-203ENST00000393310 FLNCQ14315 2725 aa5.86□□□□□ -1.47
LIMS1-203ENST00000393310 SMCPP49901 116 aaPredicted RBP5.85□□□□□ -1.47
LIMS1-203ENST00000393310 IGHV3-53P01767 116 aa5.85□□□□□ -1.47
LIMS1-203ENST00000393310 IGHV3-33P01772 117 aa5.85□□□□□ -1.47
LIMS1-203ENST00000393310 ORMDL1Q9P0S3 153 aa5.85□□□□□ -1.47
LIMS1-203ENST00000393310 AKAP13Q12802 2813 aa5.85□□□□□ -1.47
LIMS1-203ENST00000393310 K7EQG2 157 aa5.85□□□□□ -1.47
LIMS1-203ENST00000393310 CRIP3Q6Q6R5 217 aa5.85□□□□□ -1.47
LIMS1-203ENST00000393310 UBE2D1P51668 147 aa5.85□□□□□ -1.47
LIMS1-203ENST00000393310 H0Y9J4 135 aa5.84□□□□□ -1.47
LIMS1-203ENST00000393310 J3QRE1 110 aa5.84□□□□□ -1.47
LIMS1-203ENST00000393310 NDUFA4L2Q9NRX3 87 aa5.84□□□□□ -1.47
LIMS1-203ENST00000393310 A0A087WVE0 104 aa5.84□□□□□ -1.47
LIMS1-203ENST00000393310 DEFB104AQ8WTQ1 72 aa5.84□□□□□ -1.47
LIMS1-203ENST00000393310 IGHV3-64A0A075B6Q5 118 aa5.84□□□□□ -1.47
LIMS1-203ENST00000393310 H0YGX0 51 aa5.84□□□□□ -1.47
LIMS1-203ENST00000393310 ARMS2P0C7Q2 107 aa5.83□□□□□ -1.48
LIMS1-203ENST00000393310 FAM74A4Q5TZK3 123 aa5.83□□□□□ -1.48
LIMS1-203ENST00000393310 TRBV7-3A0A075B6L6 115 aa5.83□□□□□ -1.48
LIMS1-203ENST00000393310 IGKV1D-8A0A087WSZ0 117 aa5.83□□□□□ -1.48
LIMS1-203ENST00000393310 IGHV3-48P01763 117 aa5.83□□□□□ -1.48
LIMS1-203ENST00000393310 FHL2Q14192 279 aa5.83□□□□□ -1.48
LIMS1-203ENST00000393310 C14orf132Q9NPU4 83 aa5.83□□□□□ -1.48
LIMS1-203ENST00000393310 LOC100131303A0A0U1RQF7 123 aa5.83□□□□□ -1.48
LIMS1-203ENST00000393310 NACAE9PAV3 2078 aa5.82□□□□□ -1.48
LIMS1-203ENST00000393310 FHL1Q13642 323 aa5.82□□□□□ -1.48
LIMS1-203ENST00000393310 LYZL1Q6UWQ5 148 aa5.82□□□□□ -1.48
LIMS1-203ENST00000393310 H7C423 109 aa5.82□□□□□ -1.48
LIMS1-203ENST00000393310 A0A0A6YYD4 124 aa5.82□□□□□ -1.48
LIMS1-203ENST00000393310 TMEM254Q8TBM7 123 aa5.82□□□□□ -1.48
LIMS1-203ENST00000393310 CYP4F30PQ9H0H9 118 aa5.82□□□□□ -1.48
LIMS1-203ENST00000393310 hDV103S1A0JD37 113 aa5.81□□□□□ -1.48
LIMS1-203ENST00000393310 LINC00322Q6ZN03 302 aaPredicted RBP5.81□□□□□ -1.48
LIMS1-203ENST00000393310 IGKV2D-26A0A0A0MRZ7 120 aa5.81□□□□□ -1.48
LIMS1-203ENST00000393310 IGHV3-38A0A0C4DH36 116 aa5.81□□□□□ -1.48
LIMS1-203ENST00000393310 PDE6HQ13956 83 aa5.81□□□□□ -1.48
LIMS1-203ENST00000393310 C9orf116Q5BN46 136 aaPredicted RBP5.8□□□□□ -1.48
LIMS1-203ENST00000393310 H3BNG1 76 aa5.8□□□□□ -1.48
LIMS1-203ENST00000393310 NREPQ16612 68 aa5.79□□□□□ -1.48
LIMS1-203ENST00000393310 ODF3L2Q3SX64 289 aa5.79□□□□□ -1.48
LIMS1-203ENST00000393310 C2orf66Q6UXQ4 117 aa5.79□□□□□ -1.48
LIMS1-203ENST00000393310 WFDC10AQ9H1F0 79 aa5.79□□□□□ -1.48
LIMS1-203ENST00000393310 PDE6GP18545 87 aa5.79□□□□□ -1.48
LIMS1-203ENST00000393310 CTSGP08311 255 aa5.79□□□□□ -1.48
LIMS1-203ENST00000393310 SPAG11BQ08648 103 aa5.78□□□□□ -1.48
LIMS1-203ENST00000393310 SPAG11AQ6PDA7 123 aa5.78□□□□□ -1.48
LIMS1-203ENST00000393310 LYPD1Q8N2G4 141 aa5.78□□□□□ -1.48
LIMS1-203ENST00000393310 LENEPQ9Y5L5 61 aa5.78□□□□□ -1.48
LIMS1-203ENST00000393310 SEC61BP60468 96 aaKnown RBP5.78□□□□□ -1.48
LIMS1-203ENST00000393310 SUMO4Q6EEV6 95 aa5.78□□□□□ -1.48
LIMS1-203ENST00000393310 FGF23Q9GZV9 251 aaPredicted RBP5.78□□□□□ -1.48
LIMS1-203ENST00000393310 IGKV1D-13A0A0B4J2D9 117 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms