RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 REG3AQ06141 175 aa17.55■□□□□ 0.4
SMARCD3-203ENST00000392811 LINC01561Q8N1V8 128 aa17.55■□□□□ 0.4
SMARCD3-203ENST00000392811 EGFEM1PQ0D2K5 195 aa17.55■□□□□ 0.4
SMARCD3-203ENST00000392811 TRBV10-2A0A0K0K1G8 114 aa17.54■□□□□ 0.4
SMARCD3-203ENST00000392811 LST1O00453 97 aa17.54■□□□□ 0.4
SMARCD3-203ENST00000392811 LELP1Q5T871 98 aa17.54■□□□□ 0.4
SMARCD3-203ENST00000392811 CD164L2Q6UWJ8 174 aa17.54■□□□□ 0.4
SMARCD3-203ENST00000392811 Q8IZM0 81 aa17.54■□□□□ 0.4
SMARCD3-203ENST00000392811 CHCHD10Q8WYQ3 142 aaPredicted RBP17.54■□□□□ 0.4
SMARCD3-203ENST00000392811 GAGE12HA6NDE8 117 aa17.54■□□□□ 0.4
SMARCD3-203ENST00000392811 PFN2P35080 140 aa17.54■□□□□ 0.4
SMARCD3-203ENST00000392811 SND1-IT1Q9HBX3 110 aa17.53■□□□□ 0.4
SMARCD3-203ENST00000392811 IGLV10-54A0A075B6I4 117 aa17.52■□□□□ 0.4
SMARCD3-203ENST00000392811 LINC01600Q96MT4 127 aa17.52■□□□□ 0.4
SMARCD3-203ENST00000392811 C21orf62-AS1Q17RA5 79 aa17.52■□□□□ 0.39
SMARCD3-203ENST00000392811 SPATA25Q9BR10 227 aa17.51■□□□□ 0.39
SMARCD3-203ENST00000392811 COX7A2LO14548 114 aa17.5■□□□□ 0.39
SMARCD3-203ENST00000392811 CCL18P55774 89 aa17.5■□□□□ 0.39
SMARCD3-203ENST00000392811 C2orf82Q6UX34 121 aa17.5■□□□□ 0.39
SMARCD3-203ENST00000392811 IGKV2-28A0A075B6P5 120 aa17.49■□□□□ 0.39
SMARCD3-203ENST00000392811 IGKV2D-28P01615 120 aa17.49■□□□□ 0.39
SMARCD3-203ENST00000392811 FBN1P35555 2871 aaKnown RBP17.49■□□□□ 0.39
SMARCD3-203ENST00000392811 TRAV13-2A0A0B4J235 113 aa17.48■□□□□ 0.39
SMARCD3-203ENST00000392811 LINC00337Q8N6G1 96 aa17.47■□□□□ 0.39
SMARCD3-203ENST00000392811 CRPP02741 224 aa17.47■□□□□ 0.39
SMARCD3-203ENST00000392811 NTN5Q8WTR8 489 aaPredicted RBP17.47■□□□□ 0.39
SMARCD3-203ENST00000392811 KIAA0087Q14695 138 aa17.46■□□□□ 0.39
SMARCD3-203ENST00000392811 CKS1BP61024 79 aa17.45■□□□□ 0.38
SMARCD3-203ENST00000392811 LYPD5Q6UWN5 251 aa17.45■□□□□ 0.38
SMARCD3-203ENST00000392811 MALP21145 153 aa17.44■□□□□ 0.38
SMARCD3-203ENST00000392811 STAB1Q9NY15 2570 aa17.44■□□□□ 0.38
SMARCD3-203ENST00000392811 H3BT86 120 aa17.43■□□□□ 0.38
SMARCD3-203ENST00000392811 SIGMAR1Q99720 223 aa17.43■□□□□ 0.38
SMARCD3-203ENST00000392811 CFAP161Q6P656 301 aa17.42■□□□□ 0.38
SMARCD3-203ENST00000392811 KLK12Q9UKR0 248 aa17.42■□□□□ 0.38
SMARCD3-203ENST00000392811 Q6ZTC4 211 aa17.4■□□□□ 0.38
SMARCD3-203ENST00000392811 CDIP1Q9H305 208 aa17.4■□□□□ 0.38
SMARCD3-203ENST00000392811 PRR34Q9NV39 138 aa17.4■□□□□ 0.38
SMARCD3-203ENST00000392811 CMYA5Q8N3K9 4069 aa17.4■□□□□ 0.38
SMARCD3-203ENST00000392811 PKD1L1Q8TDX9 2849 aa17.4■□□□□ 0.38
SMARCD3-203ENST00000392811 RPL28P46779 137 aaKnown RBP17.4■□□□□ 0.38
SMARCD3-203ENST00000392811 TEX49A0A1B0GTD5 131 aa17.39■□□□□ 0.37
SMARCD3-203ENST00000392811 CXCL5P42830 114 aa17.39■□□□□ 0.37
SMARCD3-203ENST00000392811 KPRPQ5T749 579 aaPredicted RBP17.39■□□□□ 0.37
SMARCD3-203ENST00000392811 H3BNG1 76 aa17.38■□□□□ 0.37
SMARCD3-203ENST00000392811 UBE2WQ96B02 151 aa17.37■□□□□ 0.37
SMARCD3-203ENST00000392811 ENHOQ6UWT2 76 aa17.37■□□□□ 0.37
SMARCD3-203ENST00000392811 SMIM11BQ8TCY0 68 aa17.35■□□□□ 0.37
SMARCD3-203ENST00000392811 FAM218AQ96MZ4 157 aa17.35■□□□□ 0.37
SMARCD3-203ENST00000392811 KLK5Q9Y337 293 aaPredicted RBP17.34■□□□□ 0.37
SMARCD3-203ENST00000392811 A0A0J9YWU9 116 aa17.33■□□□□ 0.37
SMARCD3-203ENST00000392811 TRACP01848 142 aa17.33■□□□□ 0.37
SMARCD3-203ENST00000392811 COX17Q14061 63 aa17.33■□□□□ 0.37
SMARCD3-203ENST00000392811 C9orf116Q5BN46 136 aaPredicted RBP17.32■□□□□ 0.36
SMARCD3-203ENST00000392811 WFDC10BQ8IUB3 73 aa17.31■□□□□ 0.36
SMARCD3-203ENST00000392811 MAST4O15021 2626 aa17.31■□□□□ 0.36
SMARCD3-203ENST00000392811 SPAG11BQ08648 103 aa17.31■□□□□ 0.36
SMARCD3-203ENST00000392811 ANK2Q01484 3957 aa17.3■□□□□ 0.36
SMARCD3-203ENST00000392811 CYSRT1A8MQ03 144 aa17.3■□□□□ 0.36
SMARCD3-203ENST00000392811 NANOS2P60321 138 aaKnown RBP17.3■□□□□ 0.36
SMARCD3-203ENST00000392811 C6orf223Q8N319 242 aa17.3■□□□□ 0.36
SMARCD3-203ENST00000392811 OR13C6PQ8NH95 151 aa17.3■□□□□ 0.36
SMARCD3-203ENST00000392811 TRAV8-4A0A0B4J246 113 aa17.28■□□□□ 0.36
SMARCD3-203ENST00000392811 TENM3Q9P273 2699 aa17.27■□□□□ 0.36
SMARCD3-203ENST00000392811 C10orf25Q5T742 122 aa17.27■□□□□ 0.36
SMARCD3-203ENST00000392811 LINC00526Q96FQ7 95 aa17.27■□□□□ 0.36
SMARCD3-203ENST00000392811 DNAH3Q8TD57 4116 aa17.27■□□□□ 0.35
SMARCD3-203ENST00000392811 UNQ6190/PRO20217Q6UXQ8 127 aa17.26■□□□□ 0.35
SMARCD3-203ENST00000392811 C11orf45Q8TAV5 145 aa17.26■□□□□ 0.35
SMARCD3-203ENST00000392811 XGP55808 180 aa17.25■□□□□ 0.35
SMARCD3-203ENST00000392811 PRR3P79522 188 aaKnown RBP17.25■□□□□ 0.35
SMARCD3-203ENST00000392811 ESRGQ1W209 222 aa17.25■□□□□ 0.35
SMARCD3-203ENST00000392811 DEFB131BA0A096LNP1 70 aa17.24■□□□□ 0.35
SMARCD3-203ENST00000392811 NDUFC2O95298 119 aa17.23■□□□□ 0.35
SMARCD3-203ENST00000392811 BAALC-AS2P0C853 105 aa17.23■□□□□ 0.35
SMARCD3-203ENST00000392811 DEFB121Q5J5C9 76 aa17.23■□□□□ 0.35
SMARCD3-203ENST00000392811 H0YGX0 51 aa17.22■□□□□ 0.35
SMARCD3-203ENST00000392811 MT-ATP8P03928 68 aa17.22■□□□□ 0.35
SMARCD3-203ENST00000392811 Q9HAA7 133 aa17.22■□□□□ 0.35
SMARCD3-203ENST00000392811 A0A087WYN8 130 aa17.21■□□□□ 0.35
SMARCD3-203ENST00000392811 SCGB1A1P11684 91 aa17.21■□□□□ 0.35
SMARCD3-203ENST00000392811 BAHCC1Q9P281 2608 aa17.2■□□□□ 0.34
SMARCD3-203ENST00000392811 PRB2P02812 416 aaPredicted RBP17.2■□□□□ 0.34
SMARCD3-203ENST00000392811 C22orf24Q9Y442 160 aa17.18■□□□□ 0.34
SMARCD3-203ENST00000392811 Q8NDZ9 215 aa17.18■□□□□ 0.34
SMARCD3-203ENST00000392811 KRTAP26-1Q6PEX3 210 aa17.16■□□□□ 0.34
SMARCD3-203ENST00000392811 COL6A5A8TX70 2615 aa17.15■□□□□ 0.34
SMARCD3-203ENST00000392811 MUC7Q8TAX7 377 aa17.15■□□□□ 0.34
SMARCD3-203ENST00000392811 NOTCH1P46531 2555 aa17.15■□□□□ 0.34
SMARCD3-203ENST00000392811 GVQW2A0A096LPI5 108 aaPredicted RBP17.14■□□□□ 0.33
SMARCD3-203ENST00000392811 DNAL4O96015 105 aa17.14■□□□□ 0.33
SMARCD3-203ENST00000392811 NCR3O14931 201 aa17.13■□□□□ 0.33
SMARCD3-203ENST00000392811 LECT2O14960 151 aa17.13■□□□□ 0.33
SMARCD3-203ENST00000392811 TMEM126AQ9H061 195 aa17.13■□□□□ 0.33
SMARCD3-203ENST00000392811 C6orf48Q9UBA6 75 aa17.13■□□□□ 0.33
SMARCD3-203ENST00000392811 LINC01556Q5JQF7 62 aa17.11■□□□□ 0.33
SMARCD3-203ENST00000392811 HIGD2BQ4VC39 106 aa17.1■□□□□ 0.33
SMARCD3-203ENST00000392811 FAM240AA0A1B0GVK7 77 aa17.09■□□□□ 0.33
SMARCD3-203ENST00000392811 K7EIL1 84 aa17.09■□□□□ 0.33
SMARCD3-203ENST00000392811 TM2D3Q9BRN9 247 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms