RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 C5orf52A6NGY3 159 aa16.35■□□□□ 0.21
HOMER3-202ENST00000392351 IGKCP01834 107 aa16.35■□□□□ 0.21
HOMER3-202ENST00000392351 CKS1BP61024 79 aa16.35■□□□□ 0.21
HOMER3-202ENST00000392351 C10orf25Q5T742 122 aa16.35■□□□□ 0.21
HOMER3-202ENST00000392351 TMEM223A0PJW6 202 aa16.34■□□□□ 0.21
HOMER3-202ENST00000392351 LINC01545Q5VT33 79 aa16.34■□□□□ 0.21
HOMER3-202ENST00000392351 SDIM1Q6ZPB5 146 aa16.34■□□□□ 0.21
HOMER3-202ENST00000392351 CXCL5P42830 114 aa16.31■□□□□ 0.2
HOMER3-202ENST00000392351 FAM30AQ9NZY2 134 aa16.3■□□□□ 0.2
HOMER3-202ENST00000392351 C6orf48Q9UBA6 75 aa16.3■□□□□ 0.2
HOMER3-202ENST00000392351 RNF151Q2KHN1 245 aa16.3■□□□□ 0.2
HOMER3-202ENST00000392351 TMA7Q9Y2S6 64 aaKnown RBP16.3■□□□□ 0.2
HOMER3-202ENST00000392351 TRBV30A0A0K0K1B3 111 aa16.28■□□□□ 0.2
HOMER3-202ENST00000392351 Q6ZSA8 131 aa16.28■□□□□ 0.2
HOMER3-202ENST00000392351 PKIGQ9Y2B9 76 aa16.27■□□□□ 0.2
HOMER3-202ENST00000392351 C20orf202A1L168 122 aa16.26■□□□□ 0.19
HOMER3-202ENST00000392351 LOC107984640A0A0U1RRK4 108 aa16.26■□□□□ 0.19
HOMER3-202ENST00000392351 HERVK_113P61574 105 aa16.25■□□□□ 0.19
HOMER3-202ENST00000392351 C9orf116Q5BN46 136 aaPredicted RBP16.25■□□□□ 0.19
HOMER3-202ENST00000392351 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.25■□□□□ 0.19
HOMER3-202ENST00000392351 A0A096LNI7 61 aa16.24■□□□□ 0.19
HOMER3-202ENST00000392351 IGKV2-24A0A0C4DH68 120 aa16.24■□□□□ 0.19
HOMER3-202ENST00000392351 CHTF8P0CG12 524 aa16.24■□□□□ 0.19
HOMER3-202ENST00000392351 PANO1I0J062 215 aa16.23■□□□□ 0.19
HOMER3-202ENST00000392351 CDK2AP2O75956 126 aa16.23■□□□□ 0.19
HOMER3-202ENST00000392351 HAMPP81172 84 aa16.23■□□□□ 0.19
HOMER3-202ENST00000392351 RPL18AQ02543 176 aaKnown RBP16.23■□□□□ 0.19
HOMER3-202ENST00000392351 DNAH8Q96JB1 4490 aa16.23■□□□□ 0.19
HOMER3-202ENST00000392351 KIAA1109Q2LD37 5005 aa16.23■□□□□ 0.19
HOMER3-202ENST00000392351 APOBP04114 4563 aaKnown RBP16.23■□□□□ 0.19
HOMER3-202ENST00000392351 GAGE2BQ13066 116 aa16.21■□□□□ 0.18
HOMER3-202ENST00000392351 XGP55808 180 aa16.2■□□□□ 0.18
HOMER3-202ENST00000392351 LEPROTO15243 131 aa16.19■□□□□ 0.18
HOMER3-202ENST00000392351 TLX1NBP0CAT3 122 aa16.19■□□□□ 0.18
HOMER3-202ENST00000392351 PTTG1IPP53801 180 aa16.19■□□□□ 0.18
HOMER3-202ENST00000392351 SPACA4Q8TDM5 124 aa16.19■□□□□ 0.18
HOMER3-202ENST00000392351 CIRBPQ14011 172 aaKnown RBP16.18■□□□□ 0.18
HOMER3-202ENST00000392351 SFTA2Q6UW10 78 aa16.18■□□□□ 0.18
HOMER3-202ENST00000392351 Q6ZRP5 223 aa16.18■□□□□ 0.18
HOMER3-202ENST00000392351 PLEKHB2Q96CS7 222 aa16.18■□□□□ 0.18
HOMER3-202ENST00000392351 ZNF625Q96I27 306 aaPredicted RBP16.18■□□□□ 0.18
HOMER3-202ENST00000392351 NDUFC2-KCTD14E9PQ53 114 aa16.17■□□□□ 0.18
HOMER3-202ENST00000392351 TSPEAR-AS2P59090 65 aa16.17■□□□□ 0.18
HOMER3-202ENST00000392351 MAJINQ3KP22 176 aa16.17■□□□□ 0.18
HOMER3-202ENST00000392351 SCXQ7RTU7 201 aa16.17■□□□□ 0.18
HOMER3-202ENST00000392351 ATOH7Q8N100 152 aa16.17■□□□□ 0.18
HOMER3-202ENST00000392351 STPG4Q8N801 248 aa16.17■□□□□ 0.18
HOMER3-202ENST00000392351 DPH3Q96FX2 82 aa16.17■□□□□ 0.18
HOMER3-202ENST00000392351 LINC00474Q9P2X8 69 aa16.17■□□□□ 0.18
HOMER3-202ENST00000392351 J3QQQ9 107 aa16.16■□□□□ 0.18
HOMER3-202ENST00000392351 AKR1D1P51857 326 aa16.16■□□□□ 0.18
HOMER3-202ENST00000392351 E9PLD3 99 aa16.15■□□□□ 0.18
HOMER3-202ENST00000392351 GAGE2EQ4V326 116 aa16.15■□□□□ 0.18
HOMER3-202ENST00000392351 GAGE2DQ9UEU5 116 aa16.15■□□□□ 0.18
HOMER3-202ENST00000392351 NDUFA12Q9UI09 145 aa16.15■□□□□ 0.18
HOMER3-202ENST00000392351 CIRBP-AS1Q8TBR5 109 aa16.14■□□□□ 0.17
HOMER3-202ENST00000392351 RYR1P21817 5038 aa16.13■□□□□ 0.17
HOMER3-202ENST00000392351 LGALS3P17931 250 aaKnown RBP16.13■□□□□ 0.17
HOMER3-202ENST00000392351 A0A087WYN8 130 aa16.11■□□□□ 0.17
HOMER3-202ENST00000392351 PFN2P35080 140 aa16.11■□□□□ 0.17
HOMER3-202ENST00000392351 ERG28Q9UKR5 140 aa16.11■□□□□ 0.17
HOMER3-202ENST00000392351 MYMXA0A1B0GTQ4 84 aa16.1■□□□□ 0.17
HOMER3-202ENST00000392351 SCGB1D1O95968 90 aa16.1■□□□□ 0.17
HOMER3-202ENST00000392351 HSPG2P98160 4391 aa16.1■□□□□ 0.17
HOMER3-202ENST00000392351 HERV-K104P63124 156 aa16.09■□□□□ 0.17
HOMER3-202ENST00000392351 NMUP48645 174 aa16.08■□□□□ 0.16
HOMER3-202ENST00000392351 IGKV2D-26A0A0A0MRZ7 120 aa16.07■□□□□ 0.16
HOMER3-202ENST00000392351 COX17Q14061 63 aa16.06■□□□□ 0.16
HOMER3-202ENST00000392351 XAGE1AQ9HD64 81 aa16.06■□□□□ 0.16
HOMER3-202ENST00000392351 PLAC8Q9NZF1 115 aa16.06■□□□□ 0.16
HOMER3-202ENST00000392351 ANKRD39Q53RE8 183 aa16.05■□□□□ 0.16
HOMER3-202ENST00000392351 C9orf129Q5T035 196 aaKnown RBP16.05■□□□□ 0.16
HOMER3-202ENST00000392351 HERC2O95714 4834 aa16.05■□□□□ 0.16
HOMER3-202ENST00000392351 MEIG1Q5JSS6 88 aa16.04■□□□□ 0.16
HOMER3-202ENST00000392351 SMR3BP02814 79 aaPredicted RBP16.04■□□□□ 0.16
HOMER3-202ENST00000392351 A0A0U1RRA0 63 aa16.03■□□□□ 0.16
HOMER3-202ENST00000392351 LINC00158P58513 81 aa16.03■□□□□ 0.16
HOMER3-202ENST00000392351 A0A1W2PNN7 141 aa16.02■□□□□ 0.16
HOMER3-202ENST00000392351 FAM168BA1KXE4 195 aa16.02■□□□□ 0.16
HOMER3-202ENST00000392351 SMIM13P0DJ93 91 aa16.01■□□□□ 0.15
HOMER3-202ENST00000392351 HSBP1L1C9JCN9 74 aa16■□□□□ 0.15
HOMER3-202ENST00000392351 TTTY13Q9BZ97 58 aa16■□□□□ 0.15
HOMER3-202ENST00000392351 LINC00587B1AMM8 73 aa16■□□□□ 0.15
HOMER3-202ENST00000392351 FAM19A5Q7Z5A7 132 aaPredicted RBP15.99■□□□□ 0.15
HOMER3-202ENST00000392351 ZNF815PA8K554 130 aa15.98■□□□□ 0.15
HOMER3-202ENST00000392351 SND1-IT1Q9HBX3 110 aa15.98■□□□□ 0.15
HOMER3-202ENST00000392351 JOSD1Q15040 202 aaPredicted RBP15.97■□□□□ 0.15
HOMER3-202ENST00000392351 A0A0J9YXY3 114 aa15.96■□□□□ 0.15
HOMER3-202ENST00000392351 EPM2AB3EWF7 344 aa15.96■□□□□ 0.14
HOMER3-202ENST00000392351 KRTAP7-1Q8IUC3 87 aa15.95■□□□□ 0.14
HOMER3-202ENST00000392351 LINC00528Q8N1L1 170 aa15.95■□□□□ 0.14
HOMER3-202ENST00000392351 MIR7-3HGQ8N6C7 128 aa15.95■□□□□ 0.14
HOMER3-202ENST00000392351 KRTAP17-1Q9BYP8 105 aa15.94■□□□□ 0.14
HOMER3-202ENST00000392351 SERTAD4-AS1Q5TG53 156 aa15.93■□□□□ 0.14
HOMER3-202ENST00000392351 PCP2Q8IVA1 136 aa15.93■□□□□ 0.14
HOMER3-202ENST00000392351 Q8N1X5 172 aa15.93■□□□□ 0.14
HOMER3-202ENST00000392351 DAND5Q8N907 189 aa15.92■□□□□ 0.14
HOMER3-202ENST00000392351 FAT1Q14517 4588 aa15.91■□□□□ 0.14
HOMER3-202ENST00000392351 M0QXV9 152 aa15.91■□□□□ 0.14
HOMER3-202ENST00000392351 PHF5AQ7RTV0 110 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms