RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 ZNF469Q96JG9 3925 aaPredicted RBP0.29□□□□□ -2.36
SNORA48.1-201ENST00000390879 A0A1B0GUT8 65 aa0.29□□□□□ -2.36
SNORA48.1-201ENST00000390879 CEBPZOSA8MTT3 80 aa0.29□□□□□ -2.36
SNORA48.1-201ENST00000390879 COX8AP10176 69 aa0.29□□□□□ -2.36
SNORA48.1-201ENST00000390879 SPRR1AP35321 89 aa0.29□□□□□ -2.36
SNORA48.1-201ENST00000390879 ADIRFQ15847 76 aa0.29□□□□□ -2.36
SNORA48.1-201ENST00000390879 DEFB109BQ30KR1 87 aa0.29□□□□□ -2.36
SNORA48.1-201ENST00000390879 S100A13Q99584 98 aa0.29□□□□□ -2.36
SNORA48.1-201ENST00000390879 FBN2P35556 2912 aa0.28□□□□□ -2.36
SNORA48.1-201ENST00000390879 DOCK11Q5JSL3 2073 aa0.28□□□□□ -2.36
SNORA48.1-201ENST00000390879 SPTY2D1-AS1A0A0U1RR47 76 aa0.28□□□□□ -2.36
SNORA48.1-201ENST00000390879 KANTRA0A1W2PQU2 76 aa0.28□□□□□ -2.36
SNORA48.1-201ENST00000390879 CPSF4LA6NMK7 179 aaKnown RBP0.28□□□□□ -2.36
SNORA48.1-201ENST00000390879 I3L3M4 83 aa0.28□□□□□ -2.36
SNORA48.1-201ENST00000390879 ACYP1P07311 99 aa0.28□□□□□ -2.36
SNORA48.1-201ENST00000390879 KRTAP21-1Q3LI58 79 aa0.28□□□□□ -2.36
SNORA48.1-201ENST00000390879 Q5VSD8 79 aa0.28□□□□□ -2.36
SNORA48.1-201ENST00000390879 KRTAP5-10Q6L8G5 202 aa0.28□□□□□ -2.36
SNORA48.1-201ENST00000390879 ST20Q9HBF5 79 aa0.28□□□□□ -2.36
SNORA48.1-201ENST00000390879 APLNQ9ULZ1 77 aa0.28□□□□□ -2.36
SNORA48.1-201ENST00000390879 FRAS1Q86XX4 4008 aa0.28□□□□□ -2.36
SNORA48.1-201ENST00000390879 NOTCH1P46531 2555 aa0.28□□□□□ -2.37
SNORA48.1-201ENST00000390879 CCDC18Q5T9S5 1454 aa0.28□□□□□ -2.37
SNORA48.1-201ENST00000390879 SLIT1O75093 1534 aa0.28□□□□□ -2.37
SNORA48.1-201ENST00000390879 PAPPAQ13219 1627 aa0.27□□□□□ -2.37
SNORA48.1-201ENST00000390879 KNDC1Q76NI1 1749 aa0.27□□□□□ -2.37
SNORA48.1-201ENST00000390879 MON2Q7Z3U7 1717 aa0.27□□□□□ -2.37
SNORA48.1-201ENST00000390879 ANKRD26Q9UPS8 1709 aa0.27□□□□□ -2.37
SNORA48.1-201ENST00000390879 BTAF1O14981 1849 aa0.27□□□□□ -2.37
SNORA48.1-201ENST00000390879 SBF2Q86WG5 1849 aa0.27□□□□□ -2.37
SNORA48.1-201ENST00000390879 MUC16Q8WXI7 14507 aa0.27□□□□□ -2.37
SNORA48.1-201ENST00000390879 KLK9Q2XQG4 91 aa0.27□□□□□ -2.37
SNORA48.1-201ENST00000390879 GAFA1Q96PS6 74 aa0.27□□□□□ -2.37
SNORA48.1-201ENST00000390879 U3KQA8 63 aa0.27□□□□□ -2.37
SNORA48.1-201ENST00000390879 ABCC3O15438 1527 aa0.27□□□□□ -2.37
SNORA48.1-201ENST00000390879 CUX1P39880 1505 aa0.27□□□□□ -2.37
SNORA48.1-201ENST00000390879 SAMD9Q5K651 1589 aa0.27□□□□□ -2.37
SNORA48.1-201ENST00000390879 AKAP12Q02952 1782 aa0.27□□□□□ -2.37
SNORA48.1-201ENST00000390879 KDM3BQ7LBC6 1761 aa0.27□□□□□ -2.37
SNORA48.1-201ENST00000390879 TRAV21A0A0B4J279 112 aa0.26□□□□□ -2.37
SNORA48.1-201ENST00000390879 H3BUT2 72 aa0.26□□□□□ -2.37
SNORA48.1-201ENST00000390879 WFDC9Q8NEX5 89 aa0.26□□□□□ -2.37
SNORA48.1-201ENST00000390879 DEFB105AQ8NG35 78 aa0.26□□□□□ -2.37
SNORA48.1-201ENST00000390879 MED14O60244 1454 aa0.26□□□□□ -2.37
SNORA48.1-201ENST00000390879 CCDC141Q6ZP82 1450 aa0.26□□□□□ -2.37
SNORA48.1-201ENST00000390879 RB1CC1Q8TDY2 1594 aa0.26□□□□□ -2.37
SNORA48.1-201ENST00000390879 BIVM-ERCC5R4GMW8 1640 aa0.26□□□□□ -2.37
SNORA48.1-201ENST00000390879 ASXL3Q9C0F0 2248 aa0.26□□□□□ -2.37
SNORA48.1-201ENST00000390879 TTC28Q96AY4 2481 aa0.26□□□□□ -2.37
SNORA48.1-201ENST00000390879 XRN1Q8IZH2 1706 aaKnown RBP0.25□□□□□ -2.37
SNORA48.1-201ENST00000390879 NHSL1Q5SYE7 1610 aa0.25□□□□□ -2.37
SNORA48.1-201ENST00000390879 COX7BP24311 80 aa0.25□□□□□ -2.37
SNORA48.1-201ENST00000390879 MRPL34Q9BQ48 92 aaKnown RBP0.25□□□□□ -2.37
SNORA48.1-201ENST00000390879 CADP27708 2225 aa0.25□□□□□ -2.37
SNORA48.1-201ENST00000390879 MYO7AQ13402 2215 aa0.25□□□□□ -2.37
SNORA48.1-201ENST00000390879 CLTCQ00610 1675 aaKnown RBP0.24□□□□□ -2.37
SNORA48.1-201ENST00000390879 ATP7BP35670 1465 aa0.24□□□□□ -2.37
SNORA48.1-201ENST00000390879 SYNE1Q8NF91 8797 aaKnown RBP0.24□□□□□ -2.37
SNORA48.1-201ENST00000390879 BVES-AS1Q5T3Y7 98 aa0.24□□□□□ -2.37
SNORA48.1-201ENST00000390879 HEPN1Q6WQI6 88 aa0.24□□□□□ -2.37
SNORA48.1-201ENST00000390879 A0A0G2JMZ2 1700 aa0.24□□□□□ -2.37
SNORA48.1-201ENST00000390879 NAV3Q8IVL0 2385 aa0.24□□□□□ -2.37
SNORA48.1-201ENST00000390879 NKTRP30414 1462 aaKnown RBP0.23□□□□□ -2.37
SNORA48.1-201ENST00000390879 WNK3Q9BYP7 1800 aa0.23□□□□□ -2.37
SNORA48.1-201ENST00000390879 A0A087WXM4 84 aa0.23□□□□□ -2.37
SNORA48.1-201ENST00000390879 SPINK4O60575 86 aa0.23□□□□□ -2.37
SNORA48.1-201ENST00000390879 H1FX-AS1Q4G0G2 97 aa0.23□□□□□ -2.37
SNORA48.1-201ENST00000390879 NUP188Q5SRE5 1749 aa0.23□□□□□ -2.37
SNORA48.1-201ENST00000390879 TARBP1Q13395 1621 aaKnown RBP0.23□□□□□ -2.37
SNORA48.1-201ENST00000390879 ZFHX3Q15911 3703 aa0.23□□□□□ -2.37
SNORA48.1-201ENST00000390879 ERVK-7P63135 1459 aa0.22□□□□□ -2.37
SNORA48.1-201ENST00000390879 MAGI2Q86UL8 1455 aa0.22□□□□□ -2.37
SNORA48.1-201ENST00000390879 LOC730098B7Z3J9 87 aa0.22□□□□□ -2.37
SNORA48.1-201ENST00000390879 NDUFB1O75438 58 aa0.22□□□□□ -2.37
SNORA48.1-201ENST00000390879 RPL38P63173 70 aaKnown RBP0.22□□□□□ -2.37
SNORA48.1-201ENST00000390879 LELP1Q5T871 98 aa0.22□□□□□ -2.37
SNORA48.1-201ENST00000390879 KIAA0556O60303 1618 aa0.22□□□□□ -2.37
SNORA48.1-201ENST00000390879 MYO3AQ8NEV4 1616 aa0.22□□□□□ -2.37
SNORA48.1-201ENST00000390879 LRRC7Q96NW7 1537 aa0.22□□□□□ -2.37
SNORA48.1-201ENST00000390879 ARHGAP35Q9NRY4 1499 aa0.22□□□□□ -2.37
SNORA48.1-201ENST00000390879 KIAA1551Q9HCM1 1747 aa0.21□□□□□ -2.38
SNORA48.1-201ENST00000390879 KIF14Q15058 1648 aa0.21□□□□□ -2.38
SNORA48.1-201ENST00000390879 PDCD11Q14690 1871 aaKnown RBP0.21□□□□□ -2.38
SNORA48.1-201ENST00000390879 FAM208BQ5VWN6 2430 aa0.21□□□□□ -2.38
SNORA48.1-201ENST00000390879 UMAD1C9J7I0 102 aa0.21□□□□□ -2.38
SNORA48.1-201ENST00000390879 CCL22O00626 93 aa0.21□□□□□ -2.38
SNORA48.1-201ENST00000390879 IFI6P09912 130 aa0.21□□□□□ -2.38
SNORA48.1-201ENST00000390879 SMIM13P0DJ93 91 aa0.21□□□□□ -2.38
SNORA48.1-201ENST00000390879 PLXNB2O15031 1838 aa0.21□□□□□ -2.38
SNORA48.1-201ENST00000390879 NCOA2Q15596 1464 aa0.21□□□□□ -2.38
SNORA48.1-201ENST00000390879 CLIP1P30622 1438 aa0.21□□□□□ -2.38
SNORA48.1-201ENST00000390879 PPRC1Q5VV67 1664 aaKnown RBP0.21□□□□□ -2.38
SNORA48.1-201ENST00000390879 CACNA1HO95180 2353 aa0.2□□□□□ -2.38
SNORA48.1-201ENST00000390879 APCP25054 2843 aa0.2□□□□□ -2.38
SNORA48.1-201ENST00000390879 TNCP24821 2201 aa0.2□□□□□ -2.38
SNORA48.1-201ENST00000390879 PHGR1C9JFL3 82 aa0.2□□□□□ -2.38
SNORA48.1-201ENST00000390879 C18orf32Q8TCD1 76 aa0.2□□□□□ -2.38
SNORA48.1-201ENST00000390879 CDKN2A-AS1Q9UH64 79 aa0.2□□□□□ -2.38
SNORA48.1-201ENST00000390879 BDP1A6H8Y1 2624 aa0.2□□□□□ -2.38
SNORA48.1-201ENST00000390879 C5P01031 1676 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms