RNA–Protein interactions for RNA: ENST00000390606.3

IGHV3-20-201, Transcript of immunoglobulin heavy variable 3-20, humanhuman

APPRIS P1 BASIC

Gene IGHV3-20, Length 415 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-20-201ENST00000390606 A0A1W2PNN7 141 aa13.8□□□□□ -0.2
IGHV3-20-201ENST00000390606 ATP5LO75964 103 aa13.8□□□□□ -0.2
IGHV3-20-201ENST00000390606 PRSS2P07478 247 aa13.8□□□□□ -0.2
IGHV3-20-201ENST00000390606 Q6ZRP5 223 aa13.8□□□□□ -0.2
IGHV3-20-201ENST00000390606 IGLC3P0DOY3 106 aa13.79□□□□□ -0.2
IGHV3-20-201ENST00000390606 HNRNPA3P51991 378 aaKnown RBP13.79□□□□□ -0.2
IGHV3-20-201ENST00000390606 C6orf226Q5I0X4 101 aa13.79□□□□□ -0.2
IGHV3-20-201ENST00000390606 C7orf33Q8WU49 177 aa13.79□□□□□ -0.2
IGHV3-20-201ENST00000390606 MYCBP2O75592 4640 aa13.78□□□□□ -0.2
IGHV3-20-201ENST00000390606 NDUFA6P56556 154 aa13.78□□□□□ -0.2
IGHV3-20-201ENST00000390606 CKS1BP61024 79 aa13.77□□□□□ -0.21
IGHV3-20-201ENST00000390606 C9orf116Q5BN46 136 aaPredicted RBP13.77□□□□□ -0.21
IGHV3-20-201ENST00000390606 SPINK8P0C7L1 97 aa13.75□□□□□ -0.21
IGHV3-20-201ENST00000390606 BAGE3Q86Y29 109 aa13.75□□□□□ -0.21
IGHV3-20-201ENST00000390606 SCO1O75880 301 aa13.74□□□□□ -0.21
IGHV3-20-201ENST00000390606 LINC00310P59036 64 aa13.74□□□□□ -0.21
IGHV3-20-201ENST00000390606 GAGE2EQ4V326 116 aa13.74□□□□□ -0.21
IGHV3-20-201ENST00000390606 GAGE2DQ9UEU5 116 aa13.74□□□□□ -0.21
IGHV3-20-201ENST00000390606 PKHD1L1Q86WI1 4243 aa13.73□□□□□ -0.21
IGHV3-20-201ENST00000390606 NDUFC2-KCTD14E9PQ53 114 aa13.73□□□□□ -0.21
IGHV3-20-201ENST00000390606 ZNF22P17026 224 aaPredicted RBP13.73□□□□□ -0.21
IGHV3-20-201ENST00000390606 CXCL5P42830 114 aa13.73□□□□□ -0.21
IGHV3-20-201ENST00000390606 COX7B2Q8TF08 81 aa13.73□□□□□ -0.21
IGHV3-20-201ENST00000390606 F8VRH5 84 aa13.72□□□□□ -0.21
IGHV3-20-201ENST00000390606 H3BRM9 83 aa13.72□□□□□ -0.21
IGHV3-20-201ENST00000390606 HSBP1O75506 76 aa13.72□□□□□ -0.21
IGHV3-20-201ENST00000390606 FAM19A2Q8N3H0 131 aa13.72□□□□□ -0.21
IGHV3-20-201ENST00000390606 PRR3P79522 188 aaKnown RBP13.71□□□□□ -0.21
IGHV3-20-201ENST00000390606 IFI27L1Q96BM0 104 aa13.71□□□□□ -0.21
IGHV3-20-201ENST00000390606 FAM168BA1KXE4 195 aa13.7□□□□□ -0.22
IGHV3-20-201ENST00000390606 C11orf86A6NJI1 115 aa13.7□□□□□ -0.22
IGHV3-20-201ENST00000390606 SERF1AO75920 110 aa13.7□□□□□ -0.22
IGHV3-20-201ENST00000390606 IGLV5-39A0A0G2JS06 123 aa13.69□□□□□ -0.22
IGHV3-20-201ENST00000390606 KRTAP29-1A8MX34 341 aaPredicted RBP13.69□□□□□ -0.22
IGHV3-20-201ENST00000390606 C9orf129Q5T035 196 aaKnown RBP13.69□□□□□ -0.22
IGHV3-20-201ENST00000390606 KRTAP7-1Q8IUC3 87 aa13.69□□□□□ -0.22
IGHV3-20-201ENST00000390606 TRAV12-1A0A0B4J245 112 aa13.68□□□□□ -0.22
IGHV3-20-201ENST00000390606 PHF5AQ7RTV0 110 aaKnown RBP13.68□□□□□ -0.22
IGHV3-20-201ENST00000390606 CHTOPQ9Y3Y2 248 aaKnown RBP13.68□□□□□ -0.22
IGHV3-20-201ENST00000390606 NUPR1O60356 82 aa13.67□□□□□ -0.22
IGHV3-20-201ENST00000390606 DMBT1Q9UGM3 2413 aaPredicted RBP13.66□□□□□ -0.22
IGHV3-20-201ENST00000390606 LRP1Q07954 4544 aaKnown RBP13.65□□□□□ -0.22
IGHV3-20-201ENST00000390606 FAM19A5Q7Z5A7 132 aaPredicted RBP13.65□□□□□ -0.22
IGHV3-20-201ENST00000390606 TMEM170BQ5T4T1 132 aa13.64□□□□□ -0.23
IGHV3-20-201ENST00000390606 FAT3Q8TDW7 4589 aa13.63□□□□□ -0.23
IGHV3-20-201ENST00000390606 LEPROTL1O95214 131 aa13.62□□□□□ -0.23
IGHV3-20-201ENST00000390606 XAGE1AQ9HD64 81 aa13.62□□□□□ -0.23
IGHV3-20-201ENST00000390606 OXTP01178 125 aa13.61□□□□□ -0.23
IGHV3-20-201ENST00000390606 J3QL48 77 aa13.6□□□□□ -0.23
IGHV3-20-201ENST00000390606 KRTAP11-1Q8IUC1 163 aa13.6□□□□□ -0.23
IGHV3-20-201ENST00000390606 PSORS1C2Q9UIG4 136 aa13.6□□□□□ -0.23
IGHV3-20-201ENST00000390606 M0QXV9 152 aa13.59□□□□□ -0.23
IGHV3-20-201ENST00000390606 TMEM223A0PJW6 202 aa13.58□□□□□ -0.24
IGHV3-20-201ENST00000390606 HIST1H2BKO60814 126 aa13.58□□□□□ -0.24
IGHV3-20-201ENST00000390606 HIST1H2BJP06899 126 aa13.58□□□□□ -0.24
IGHV3-20-201ENST00000390606 HIST1H2BOP23527 126 aa13.58□□□□□ -0.24
IGHV3-20-201ENST00000390606 HIST1H2BBP33778 126 aa13.58□□□□□ -0.24
IGHV3-20-201ENST00000390606 HIST1H2BDP58876 126 aa13.58□□□□□ -0.24
IGHV3-20-201ENST00000390606 HIST1H2BCP62807 126 aa13.58□□□□□ -0.24
IGHV3-20-201ENST00000390606 ODF1Q14990 250 aa13.58□□□□□ -0.24
IGHV3-20-201ENST00000390606 HIST2H2BEQ16778 126 aa13.58□□□□□ -0.24
IGHV3-20-201ENST00000390606 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.58□□□□□ -0.24
IGHV3-20-201ENST00000390606 SERTAD4-AS1Q5TG53 156 aa13.58□□□□□ -0.24
IGHV3-20-201ENST00000390606 HIST1H2BHQ93079 126 aa13.58□□□□□ -0.24
IGHV3-20-201ENST00000390606 HIST1H2BNQ99877 126 aa13.58□□□□□ -0.24
IGHV3-20-201ENST00000390606 HIST1H2BMQ99879 126 aa13.58□□□□□ -0.24
IGHV3-20-201ENST00000390606 SRSF9Q13242 221 aaKnown RBP eCLIP13.57□□□□□ -0.24
IGHV3-20-201ENST00000390606 HSPB8Q9UJY1 196 aa13.56□□□□□ -0.24
IGHV3-20-201ENST00000390606 FABP4P15090 132 aa13.55□□□□□ -0.24
IGHV3-20-201ENST00000390606 H0Y8G0 127 aa13.54□□□□□ -0.24
IGHV3-20-201ENST00000390606 ZNF625Q96I27 306 aaPredicted RBP13.54□□□□□ -0.24
IGHV3-20-201ENST00000390606 HERC1Q15751 4861 aa13.53□□□□□ -0.24
IGHV3-20-201ENST00000390606 C1orf137Q5JT78 98 aa13.53□□□□□ -0.24
IGHV3-20-201ENST00000390606 SPINK6Q6UWN8 80 aa13.53□□□□□ -0.24
IGHV3-20-201ENST00000390606 C22orf24Q9Y442 160 aa13.53□□□□□ -0.24
IGHV3-20-201ENST00000390606 ERG28Q9UKR5 140 aa13.52□□□□□ -0.25
IGHV3-20-201ENST00000390606 PFN2P35080 140 aa13.51□□□□□ -0.25
IGHV3-20-201ENST00000390606 SFTA2Q6UW10 78 aa13.51□□□□□ -0.25
IGHV3-20-201ENST00000390606 PLA2G2DQ9UNK4 145 aa13.51□□□□□ -0.25
IGHV3-20-201ENST00000390606 UBE2BP63146 152 aa13.49□□□□□ -0.25
IGHV3-20-201ENST00000390606 TP73-AS1Q9UF72 201 aa13.49□□□□□ -0.25
IGHV3-20-201ENST00000390606 MT1HL1P0DM35 61 aa13.48□□□□□ -0.25
IGHV3-20-201ENST00000390606 COX17Q14061 63 aa13.48□□□□□ -0.25
IGHV3-20-201ENST00000390606 IGLV7-43P04211 117 aa13.47□□□□□ -0.25
IGHV3-20-201ENST00000390606 PLNP26678 52 aa13.46□□□□□ -0.25
IGHV3-20-201ENST00000390606 LBHQ53QV2 105 aaPredicted RBP13.46□□□□□ -0.25
IGHV3-20-201ENST00000390606 MRPL55Q7Z7F7 128 aaKnown RBP13.46□□□□□ -0.25
IGHV3-20-201ENST00000390606 PMCHL2Q9BQD1 86 aa13.46□□□□□ -0.25
IGHV3-20-201ENST00000390606 SND1-IT1Q9HBX3 110 aa13.46□□□□□ -0.25
IGHV3-20-201ENST00000390606 IGLV5-37A0A075B6J1 123 aa13.45□□□□□ -0.26
IGHV3-20-201ENST00000390606 DPM2O94777 84 aa13.45□□□□□ -0.26
IGHV3-20-201ENST00000390606 MAP1LC3CQ9BXW4 147 aa13.45□□□□□ -0.26
IGHV3-20-201ENST00000390606 COA6Q5JTJ3 125 aaKnown RBP13.44□□□□□ -0.26
IGHV3-20-201ENST00000390606 LINC01600Q96MT4 127 aa13.43□□□□□ -0.26
IGHV3-20-201ENST00000390606 IGKCP01834 107 aa13.42□□□□□ -0.26
IGHV3-20-201ENST00000390606 S100A1P23297 94 aa13.42□□□□□ -0.26
IGHV3-20-201ENST00000390606 TSPEAR-AS2P59090 65 aa13.42□□□□□ -0.26
IGHV3-20-201ENST00000390606 LINC00167Q96N53 147 aa13.42□□□□□ -0.26
IGHV3-20-201ENST00000390606 REG3GQ6UW15 175 aa13.41□□□□□ -0.26
IGHV3-20-201ENST00000390606 NDUFA12Q9UI09 145 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms