RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 TOP2BQ02880 1626 aa-1.4□□□□□ -2.63
RNU6-541P-201ENST00000384709 TRANK1O15050 2925 aa-1.41□□□□□ -2.63
RNU6-541P-201ENST00000384709 ADGRL2O95490 1459 aa-1.41□□□□□ -2.63
RNU6-541P-201ENST00000384709 SSSCA1O60232 199 aa-1.41□□□□□ -2.64
RNU6-541P-201ENST00000384709 IFNGP01579 166 aa-1.41□□□□□ -2.64
RNU6-541P-201ENST00000384709 FAM167A-AS1Q96KT0 104 aa-1.41□□□□□ -2.64
RNU6-541P-201ENST00000384709 LINC01600Q96MT4 127 aa-1.41□□□□□ -2.64
RNU6-541P-201ENST00000384709 CUBNO60494 3623 aa-1.41□□□□□ -2.64
RNU6-541P-201ENST00000384709 VPS13BQ7Z7G8 4022 aa-1.41□□□□□ -2.64
RNU6-541P-201ENST00000384709 BCORQ6W2J9 1755 aa-1.42□□□□□ -2.64
RNU6-541P-201ENST00000384709 NKTRP30414 1462 aaKnown RBP-1.42□□□□□ -2.64
RNU6-541P-201ENST00000384709 DEFB112Q30KQ8 113 aa-1.42□□□□□ -2.64
RNU6-541P-201ENST00000384709 C5orf38Q86SI9 138 aa-1.42□□□□□ -2.64
RNU6-541P-201ENST00000384709 PFDN5Q99471 154 aa-1.42□□□□□ -2.64
RNU6-541P-201ENST00000384709 APLNQ9ULZ1 77 aa-1.42□□□□□ -2.64
RNU6-541P-201ENST00000384709 AKAP13Q12802 2813 aa-1.42□□□□□ -2.64
RNU6-541P-201ENST00000384709 NALCNQ8IZF0 1738 aa-1.43□□□□□ -2.64
RNU6-541P-201ENST00000384709 EPPK1P58107 5090 aaKnown RBP-1.43□□□□□ -2.64
RNU6-541P-201ENST00000384709 Q56UQ5 140 aa-1.43□□□□□ -2.64
RNU6-541P-201ENST00000384709 C8orf59Q8N0T1 100 aaPredicted RBP-1.43□□□□□ -2.64
RNU6-541P-201ENST00000384709 FAIMQ9NVQ4 179 aa-1.43□□□□□ -2.64
RNU6-541P-201ENST00000384709 LINC00474Q9P2X8 69 aa-1.43□□□□□ -2.64
RNU6-541P-201ENST00000384709 PLEKHH2Q8IVE3 1493 aa-1.43□□□□□ -2.64
RNU6-541P-201ENST00000384709 TARBP1Q13395 1621 aaKnown RBP-1.44□□□□□ -2.64
RNU6-541P-201ENST00000384709 CPSF4LA6NMK7 179 aaKnown RBP-1.44□□□□□ -2.64
RNU6-541P-201ENST00000384709 FAM223AQ8IWN6 122 aa-1.44□□□□□ -2.64
RNU6-541P-201ENST00000384709 C9orf62Q8N4C0 152 aa-1.44□□□□□ -2.64
RNU6-541P-201ENST00000384709 CCDC141Q6ZP82 1450 aa-1.44□□□□□ -2.64
RNU6-541P-201ENST00000384709 ACACAQ13085 2346 aa-1.45□□□□□ -2.64
RNU6-541P-201ENST00000384709 ABCA3Q99758 1704 aa-1.45□□□□□ -2.64
RNU6-541P-201ENST00000384709 CHKB-CPT1BH3BT56 60 aa-1.45□□□□□ -2.64
RNU6-541P-201ENST00000384709 SELENOWP63302 87 aa-1.45□□□□□ -2.64
RNU6-541P-201ENST00000384709 MEIG1Q5JSS6 88 aa-1.45□□□□□ -2.64
RNU6-541P-201ENST00000384709 LINC00470Q9BZP3 86 aa-1.45□□□□□ -2.64
RNU6-541P-201ENST00000384709 PRO1933Q9H354 126 aa-1.45□□□□□ -2.64
RNU6-541P-201ENST00000384709 MON2Q7Z3U7 1717 aa-1.46□□□□□ -2.64
RNU6-541P-201ENST00000384709 LOC105371267A0A1B0GV96 52 aa-1.46□□□□□ -2.64
RNU6-541P-201ENST00000384709 MT1AP04731 61 aa-1.46□□□□□ -2.64
RNU6-541P-201ENST00000384709 UBA52P62987 128 aaKnown RBP-1.46□□□□□ -2.64
RNU6-541P-201ENST00000384709 H1FX-AS1Q4G0G2 97 aa-1.46□□□□□ -2.64
RNU6-541P-201ENST00000384709 ANK3Q12955 4377 aaKnown RBP-1.46□□□□□ -2.64
RNU6-541P-201ENST00000384709 DNAH11Q96DT5 4516 aa-1.47□□□□□ -2.64
RNU6-541P-201ENST00000384709 DMXL1Q9Y485 3027 aa-1.47□□□□□ -2.64
RNU6-541P-201ENST00000384709 A2ML1A8K2U0 1454 aa-1.47□□□□□ -2.64
RNU6-541P-201ENST00000384709 MIF4GDA9UHW6 222 aaKnown RBP-1.47□□□□□ -2.64
RNU6-541P-201ENST00000384709 CATR1Q13166 79 aa-1.47□□□□□ -2.64
RNU6-541P-201ENST00000384709 LCN9Q8WX39 176 aa-1.47□□□□□ -2.64
RNU6-541P-201ENST00000384709 ARL11Q969Q4 196 aa-1.47□□□□□ -2.64
RNU6-541P-201ENST00000384709 FAM186AA6NE01 2351 aa-1.48□□□□□ -2.65
RNU6-541P-201ENST00000384709 EDC4Q6P2E9 1401 aaKnown RBP-1.48□□□□□ -2.65
RNU6-541P-201ENST00000384709 TOPAZ1Q8N9V7 1692 aa-1.48□□□□□ -2.65
RNU6-541P-201ENST00000384709 DNAH2Q9P225 4427 aa-1.48□□□□□ -2.65
RNU6-541P-201ENST00000384709 KNDC1Q76NI1 1749 aa-1.48□□□□□ -2.65
RNU6-541P-201ENST00000384709 APOC2P02655 101 aa-1.48□□□□□ -2.65
RNU6-541P-201ENST00000384709 FGF7P21781 194 aa-1.48□□□□□ -2.65
RNU6-541P-201ENST00000384709 UQCR10Q9UDW1 63 aa-1.48□□□□□ -2.65
RNU6-541P-201ENST00000384709 ARL2-SNX15V9GYD0 113 aa-1.48□□□□□ -2.65
RNU6-541P-201ENST00000384709 NAIPQ13075 1403 aa-1.49□□□□□ -2.65
RNU6-541P-201ENST00000384709 NLRP1Q9C000 1473 aa-1.49□□□□□ -2.65
RNU6-541P-201ENST00000384709 APOBP04114 4563 aaKnown RBP-1.49□□□□□ -2.65
RNU6-541P-201ENST00000384709 DOPEY1Q5JWR5 2465 aa-1.49□□□□□ -2.65
RNU6-541P-201ENST00000384709 LINC00846Q9NV44 126 aa-1.49□□□□□ -2.65
RNU6-541P-201ENST00000384709 QSER1Q2KHR3 1735 aa-1.49□□□□□ -2.65
RNU6-541P-201ENST00000384709 ANKRD11Q6UB99 2663 aaPredicted RBP-1.5□□□□□ -2.65
RNU6-541P-201ENST00000384709 LOC100130705A0A1B0GUX0 176 aa-1.5□□□□□ -2.65
RNU6-541P-201ENST00000384709 UBE2D3P61077 147 aa-1.5□□□□□ -2.65
RNU6-541P-201ENST00000384709 UBE2D2P62837 147 aa-1.5□□□□□ -2.65
RNU6-541P-201ENST00000384709 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.5□□□□□ -2.65
RNU6-541P-201ENST00000384709 FDCSPQ8NFU4 85 aa-1.5□□□□□ -2.65
RNU6-541P-201ENST00000384709 SLIT1O75093 1534 aa-1.5□□□□□ -2.65
RNU6-541P-201ENST00000384709 SPHKAPQ2M3C7 1700 aa-1.51□□□□□ -2.65
RNU6-541P-201ENST00000384709 F6UZH7 168 aa-1.51□□□□□ -2.65
RNU6-541P-201ENST00000384709 BIRC6Q9NR09 4857 aa-1.51□□□□□ -2.65
RNU6-541P-201ENST00000384709 NCOA3Q9Y6Q9 1424 aa-1.51□□□□□ -2.65
RNU6-541P-201ENST00000384709 UBE2L5PA0A1B0GUS4 154 aa-1.52□□□□□ -2.65
RNU6-541P-201ENST00000384709 FAM223BA6NKX1 122 aa-1.52□□□□□ -2.65
RNU6-541P-201ENST00000384709 OOSP1A8MZH6 123 aa-1.52□□□□□ -2.65
RNU6-541P-201ENST00000384709 GNG7O60262 68 aa-1.52□□□□□ -2.65
RNU6-541P-201ENST00000384709 UBE2L3P68036 154 aaKnown RBP-1.52□□□□□ -2.65
RNU6-541P-201ENST00000384709 C5P01031 1676 aa-1.52□□□□□ -2.65
RNU6-541P-201ENST00000384709 FAM25AB3EWG3 89 aa-1.53□□□□□ -2.65
RNU6-541P-201ENST00000384709 FAM25CB3EWG5 89 aa-1.53□□□□□ -2.65
RNU6-541P-201ENST00000384709 FAM25GB3EWG6 89 aa-1.53□□□□□ -2.65
RNU6-541P-201ENST00000384709 SAA2P0DJI9 122 aaPredicted RBP-1.53□□□□□ -2.65
RNU6-541P-201ENST00000384709 SEC11AP67812 179 aa-1.53□□□□□ -2.65
RNU6-541P-201ENST00000384709 PKD1L2Q7Z442 2459 aa-1.53□□□□□ -2.65
RNU6-541P-201ENST00000384709 CICQ96RK0 1608 aaPredicted RBP-1.53□□□□□ -2.65
RNU6-541P-201ENST00000384709 KALRNO60229 2985 aa-1.53□□□□□ -2.66
RNU6-541P-201ENST00000384709 MYH4Q9Y623 1939 aa-1.54□□□□□ -2.66
RNU6-541P-201ENST00000384709 CC2D2AQ9P2K1 1620 aa-1.54□□□□□ -2.66
RNU6-541P-201ENST00000384709 A0A0C4DFX4 3053 aa-1.54□□□□□ -2.66
RNU6-541P-201ENST00000384709 KTN1Q86UP2 1357 aaKnown RBP-1.54□□□□□ -2.66
RNU6-541P-201ENST00000384709 A0A1B0GWA3 101 aa-1.54□□□□□ -2.66
RNU6-541P-201ENST00000384709 COX6CP09669 75 aa-1.54□□□□□ -2.66
RNU6-541P-201ENST00000384709 ATP5EP56381 51 aaPredicted RBP-1.54□□□□□ -2.66
RNU6-541P-201ENST00000384709 Q0VG73 95 aa-1.54□□□□□ -2.66
RNU6-541P-201ENST00000384709 DPH3P1Q9H4G8 78 aa-1.54□□□□□ -2.66
RNU6-541P-201ENST00000384709 CRIPTQ9P021 101 aa-1.54□□□□□ -2.66
RNU6-541P-201ENST00000384709 SCAPERQ9BY12 1400 aa-1.55□□□□□ -2.66
RNU6-541P-201ENST00000384709 HYDINQ4G0P3 5121 aa-1.55□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms