RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 C9orf118A6NHY6 69 aa13.62□□□□□ -0.23
CPNE9-202ENST00000383831 RPL24P83731 157 aaKnown RBP13.62□□□□□ -0.23
CPNE9-202ENST00000383831 APOMO95445 188 aa13.6□□□□□ -0.23
CPNE9-202ENST00000383831 SFTA2Q6UW10 78 aa13.6□□□□□ -0.23
CPNE9-202ENST00000383831 C2orf82Q6UX34 121 aa13.6□□□□□ -0.23
CPNE9-202ENST00000383831 NAA38Q9BRA0 125 aaKnown RBP13.6□□□□□ -0.23
CPNE9-202ENST00000383831 KLK5Q9Y337 293 aaPredicted RBP13.6□□□□□ -0.23
CPNE9-202ENST00000383831 EIF4EBP3O60516 100 aaPredicted RBP13.6□□□□□ -0.23
CPNE9-202ENST00000383831 CFAP161Q6P656 301 aa13.6□□□□□ -0.23
CPNE9-202ENST00000383831 CFC1BP0CG36 223 aa13.59□□□□□ -0.23
CPNE9-202ENST00000383831 CFC1P0CG37 223 aa13.59□□□□□ -0.23
CPNE9-202ENST00000383831 IFITM1P13164 125 aa13.59□□□□□ -0.23
CPNE9-202ENST00000383831 H3BUT2 72 aa13.58□□□□□ -0.23
CPNE9-202ENST00000383831 CKS1BP61024 79 aa13.58□□□□□ -0.23
CPNE9-202ENST00000383831 C1orf43Q9BWL3 253 aa13.58□□□□□ -0.23
CPNE9-202ENST00000383831 NUPR2A6NF83 97 aa13.58□□□□□ -0.24
CPNE9-202ENST00000383831 SPAG11BQ08648 103 aa13.58□□□□□ -0.24
CPNE9-202ENST00000383831 LINC00308Q8TCZ7 52 aa13.58□□□□□ -0.24
CPNE9-202ENST00000383831 IBA57-AS1B1ANH7 110 aa13.57□□□□□ -0.24
CPNE9-202ENST00000383831 CXCL5P42830 114 aa13.57□□□□□ -0.24
CPNE9-202ENST00000383831 Q9HAA7 133 aa13.57□□□□□ -0.24
CPNE9-202ENST00000383831 IGKV2D-24A0A075B6R9 120 aa13.56□□□□□ -0.24
CPNE9-202ENST00000383831 SOSTDC1Q6X4U4 206 aa13.55□□□□□ -0.24
CPNE9-202ENST00000383831 ERG28Q9UKR5 140 aa13.55□□□□□ -0.24
CPNE9-202ENST00000383831 DYNC2H1Q8NCM8 4307 aaKnown RBP13.55□□□□□ -0.24
CPNE9-202ENST00000383831 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.55□□□□□ -0.24
CPNE9-202ENST00000383831 LINC00158P58513 81 aa13.55□□□□□ -0.24
CPNE9-202ENST00000383831 C6orf223Q8N319 242 aa13.55□□□□□ -0.24
CPNE9-202ENST00000383831 PFN2P35080 140 aa13.54□□□□□ -0.24
CPNE9-202ENST00000383831 MIR7-3HGQ8N6C7 128 aa13.54□□□□□ -0.24
CPNE9-202ENST00000383831 LINC00526Q96FQ7 95 aa13.54□□□□□ -0.24
CPNE9-202ENST00000383831 A0A0B4J2C4 111 aa13.53□□□□□ -0.24
CPNE9-202ENST00000383831 VAMP3Q15836 100 aa13.53□□□□□ -0.24
CPNE9-202ENST00000383831 UBE2DNLQ8IWF7 75 aa13.53□□□□□ -0.24
CPNE9-202ENST00000383831 PGPEP1Q9NXJ5 209 aa13.53□□□□□ -0.24
CPNE9-202ENST00000383831 A0A1W2PPM0 123 aa13.51□□□□□ -0.25
CPNE9-202ENST00000383831 COPS9Q8WXC6 57 aa13.51□□□□□ -0.25
CPNE9-202ENST00000383831 PRO1854Q9UHT4 67 aa13.51□□□□□ -0.25
CPNE9-202ENST00000383831 TSPAN13O95857 204 aa13.5□□□□□ -0.25
CPNE9-202ENST00000383831 C10orf25Q5T742 122 aa13.5□□□□□ -0.25
CPNE9-202ENST00000383831 UNQ6190/PRO20217Q6UXQ8 127 aa13.5□□□□□ -0.25
CPNE9-202ENST00000383831 C15orf56Q8N910 161 aa13.5□□□□□ -0.25
CPNE9-202ENST00000383831 HIGD2BQ4VC39 106 aa13.5□□□□□ -0.25
CPNE9-202ENST00000383831 NTN5Q8WTR8 489 aaPredicted RBP13.5□□□□□ -0.25
CPNE9-202ENST00000383831 PPDPFQ9H3Y8 114 aa13.49□□□□□ -0.25
CPNE9-202ENST00000383831 CSMD3Q7Z407 3707 aa13.48□□□□□ -0.25
CPNE9-202ENST00000383831 C9orf116Q5BN46 136 aaPredicted RBP13.48□□□□□ -0.25
CPNE9-202ENST00000383831 KRTAP1-5Q9BYS1 174 aa13.47□□□□□ -0.25
CPNE9-202ENST00000383831 ZNF561-AS1K7EIQ3 104 aa13.46□□□□□ -0.25
CPNE9-202ENST00000383831 FABP2P12104 132 aa13.46□□□□□ -0.25
CPNE9-202ENST00000383831 COX17Q14061 63 aa13.46□□□□□ -0.25
CPNE9-202ENST00000383831 DNAH7Q8WXX0 4024 aa13.46□□□□□ -0.26
CPNE9-202ENST00000383831 RMI2Q96E14 147 aa13.45□□□□□ -0.26
CPNE9-202ENST00000383831 UBE2V1Q13404 147 aa13.45□□□□□ -0.26
CPNE9-202ENST00000383831 CASC10Q5T4H9 136 aa13.44□□□□□ -0.26
CPNE9-202ENST00000383831 DNAH1Q9P2D7 4330 aa13.43□□□□□ -0.26
CPNE9-202ENST00000383831 H7C2G1 150 aa13.43□□□□□ -0.26
CPNE9-202ENST00000383831 FBN3Q75N90 2809 aa13.43□□□□□ -0.26
CPNE9-202ENST00000383831 GVQW2A0A096LPI5 108 aaPredicted RBP13.43□□□□□ -0.26
CPNE9-202ENST00000383831 CAMK2N2Q96S95 79 aa13.43□□□□□ -0.26
CPNE9-202ENST00000383831 SND1-IT1Q9HBX3 110 aa13.43□□□□□ -0.26
CPNE9-202ENST00000383831 C6orf48Q9UBA6 75 aa13.43□□□□□ -0.26
CPNE9-202ENST00000383831 SPCS1Q9Y6A9 102 aa13.43□□□□□ -0.26
CPNE9-202ENST00000383831 GAGE10A6NGK3 116 aa13.42□□□□□ -0.26
CPNE9-202ENST00000383831 K7EP34 96 aa13.42□□□□□ -0.26
CPNE9-202ENST00000383831 C2orf48Q96LS8 159 aa13.41□□□□□ -0.26
CPNE9-202ENST00000383831 LYSTQ99698 3801 aa13.41□□□□□ -0.26
CPNE9-202ENST00000383831 RPL13AP40429 203 aaKnown RBP13.4□□□□□ -0.26
CPNE9-202ENST00000383831 Q1RN00 199 aa13.39□□□□□ -0.27
CPNE9-202ENST00000383831 Q6ZRU5 148 aa13.39□□□□□ -0.27
CPNE9-202ENST00000383831 LOC107984156A0A0G2JMH3 177 aa13.38□□□□□ -0.27
CPNE9-202ENST00000383831 TRBV30A0A0K0K1B3 111 aa13.38□□□□□ -0.27
CPNE9-202ENST00000383831 GTF2H5Q6ZYL4 71 aa13.38□□□□□ -0.27
CPNE9-202ENST00000383831 ARL17AQ8IVW1 177 aa13.38□□□□□ -0.27
CPNE9-202ENST00000383831 IGKV2-28A0A075B6P5 120 aa13.37□□□□□ -0.27
CPNE9-202ENST00000383831 USP17L23D6RBM5 183 aa13.37□□□□□ -0.27
CPNE9-202ENST00000383831 IGKV2D-28P01615 120 aa13.37□□□□□ -0.27
CPNE9-202ENST00000383831 PLECQ15149 4684 aaKnown RBP13.37□□□□□ -0.27
CPNE9-202ENST00000383831 STARD9Q9P2P6 4700 aa13.37□□□□□ -0.27
CPNE9-202ENST00000383831 F8WDY8 70 aa13.35□□□□□ -0.27
CPNE9-202ENST00000383831 PSMB2P49721 201 aa13.35□□□□□ -0.27
CPNE9-202ENST00000383831 MUC7Q8TAX7 377 aa13.35□□□□□ -0.27
CPNE9-202ENST00000383831 LINC00337Q8N6G1 96 aa13.35□□□□□ -0.27
CPNE9-202ENST00000383831 NBDYA0A0U1RRE5 68 aa13.33□□□□□ -0.28
CPNE9-202ENST00000383831 SYCNQ0VAF6 134 aa13.33□□□□□ -0.28
CPNE9-202ENST00000383831 LECT2O14960 151 aa13.32□□□□□ -0.28
CPNE9-202ENST00000383831 TRIAP1O43715 76 aa13.32□□□□□ -0.28
CPNE9-202ENST00000383831 LYRM7Q5U5X0 104 aa13.32□□□□□ -0.28
CPNE9-202ENST00000383831 TRAV13-2A0A0B4J235 113 aa13.32□□□□□ -0.28
CPNE9-202ENST00000383831 TTC32Q5I0X7 151 aa13.32□□□□□ -0.28
CPNE9-202ENST00000383831 SCGB1C2P0DMR2 95 aa13.31□□□□□ -0.28
CPNE9-202ENST00000383831 TENM2Q9NT68 2774 aa13.31□□□□□ -0.28
CPNE9-202ENST00000383831 Q8NDZ9 215 aa13.3□□□□□ -0.28
CPNE9-202ENST00000383831 NDUFC2O95298 119 aa13.3□□□□□ -0.28
CPNE9-202ENST00000383831 SLPIP03973 132 aa13.3□□□□□ -0.28
CPNE9-202ENST00000383831 H3BMG7 143 aa13.28□□□□□ -0.28
CPNE9-202ENST00000383831 PSCAO43653 123 aa13.28□□□□□ -0.28
CPNE9-202ENST00000383831 TCL1BO95988 128 aa13.28□□□□□ -0.28
CPNE9-202ENST00000383831 PRR3P79522 188 aaKnown RBP13.28□□□□□ -0.28
CPNE9-202ENST00000383831 WFDC2Q14508 124 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms