RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 RPL13AP40429 203 aaKnown RBP10.39□□□□□ -0.75
HMGN1-204ENST00000380749 TIMM17AQ99595 171 aa10.39□□□□□ -0.75
HMGN1-204ENST00000380749 LINC00469Q8N7U9 141 aa10.38□□□□□ -0.75
HMGN1-204ENST00000380749 F8VRH5 84 aa10.37□□□□□ -0.75
HMGN1-204ENST00000380749 NUPR1O60356 82 aa10.37□□□□□ -0.75
HMGN1-204ENST00000380749 CXCL5P42830 114 aa10.37□□□□□ -0.75
HMGN1-204ENST00000380749 LBHQ53QV2 105 aaPredicted RBP10.37□□□□□ -0.75
HMGN1-204ENST00000380749 CDKN2A-AS1Q9UH64 79 aa10.37□□□□□ -0.75
HMGN1-204ENST00000380749 TOMM6Q96B49 74 aa10.36□□□□□ -0.75
HMGN1-204ENST00000380749 XAGE1AQ9HD64 81 aa10.36□□□□□ -0.75
HMGN1-204ENST00000380749 ZNF861PO60384 105 aa10.34□□□□□ -0.75
HMGN1-204ENST00000380749 C22orf24Q9Y442 160 aa10.34□□□□□ -0.75
HMGN1-204ENST00000380749 ERASQ7Z444 233 aa10.33□□□□□ -0.76
HMGN1-204ENST00000380749 TP73-AS1Q9UF72 201 aa10.33□□□□□ -0.76
HMGN1-204ENST00000380749 CARHSP1Q9Y2V2 147 aaKnown RBP10.33□□□□□ -0.76
HMGN1-204ENST00000380749 SCGB3A1Q96QR1 104 aa10.32□□□□□ -0.76
HMGN1-204ENST00000380749 TRAV9-1A0A075B6T8 112 aa10.31□□□□□ -0.76
HMGN1-204ENST00000380749 LINC01549A6NIU2 74 aa10.31□□□□□ -0.76
HMGN1-204ENST00000380749 KIAA1644Q3SXP7 199 aa10.31□□□□□ -0.76
HMGN1-204ENST00000380749 MRPL55Q7Z7F7 128 aaKnown RBP10.31□□□□□ -0.76
HMGN1-204ENST00000380749 SMIM1B2RUZ4 78 aa10.3□□□□□ -0.76
HMGN1-204ENST00000380749 TINCRA0A1B0GVN0 87 aa10.29□□□□□ -0.76
HMGN1-204ENST00000380749 RPL28P46779 137 aaKnown RBP10.29□□□□□ -0.76
HMGN1-204ENST00000380749 PDZD11Q5EBL8 140 aa10.29□□□□□ -0.76
HMGN1-204ENST00000380749 COX7B2Q8TF08 81 aa10.29□□□□□ -0.76
HMGN1-204ENST00000380749 CLLU1Q5K131 121 aa10.28□□□□□ -0.76
HMGN1-204ENST00000380749 BCE1O60756 84 aa10.27□□□□□ -0.76
HMGN1-204ENST00000380749 PRR4Q16378 134 aa10.27□□□□□ -0.76
HMGN1-204ENST00000380749 IGLV5-45A0A087WSX0 123 aa10.26□□□□□ -0.77
HMGN1-204ENST00000380749 ADCYAP1P18509 176 aa10.26□□□□□ -0.77
HMGN1-204ENST00000380749 S100PP25815 95 aa10.26□□□□□ -0.77
HMGN1-204ENST00000380749 UQCC3Q6UW78 93 aa10.26□□□□□ -0.77
HMGN1-204ENST00000380749 GNB1LQ9BYB4 327 aa10.26□□□□□ -0.77
HMGN1-204ENST00000380749 SMCO4Q9NRQ5 59 aa10.25□□□□□ -0.77
HMGN1-204ENST00000380749 LINC01546A6NGU7 62 aa10.24□□□□□ -0.77
HMGN1-204ENST00000380749 SPINK8P0C7L1 97 aa10.24□□□□□ -0.77
HMGN1-204ENST00000380749 FA2HQ7L5A8 372 aa10.24□□□□□ -0.77
HMGN1-204ENST00000380749 NKAPP1Q8N9T2 125 aa10.24□□□□□ -0.77
HMGN1-204ENST00000380749 CST9LQ9H4G1 147 aa10.24□□□□□ -0.77
HMGN1-204ENST00000380749 TMEM218A2RU14 115 aa10.23□□□□□ -0.77
HMGN1-204ENST00000380749 RPL37AP8A6NKH3 93 aa10.23□□□□□ -0.77
HMGN1-204ENST00000380749 H3BRM9 83 aa10.23□□□□□ -0.77
HMGN1-204ENST00000380749 PMVKQ15126 192 aa10.23□□□□□ -0.77
HMGN1-204ENST00000380749 COX19Q49B96 90 aa10.23□□□□□ -0.77
HMGN1-204ENST00000380749 LINC00167Q96N53 147 aa10.23□□□□□ -0.77
HMGN1-204ENST00000380749 MRPL18Q9H0U6 180 aaKnown RBP10.23□□□□□ -0.77
HMGN1-204ENST00000380749 MUC2Q02817 5179 aa10.22□□□□□ -0.77
HMGN1-204ENST00000380749 GAGE10A6NGK3 116 aa10.22□□□□□ -0.77
HMGN1-204ENST00000380749 RAB5BP61020 215 aa10.22□□□□□ -0.77
HMGN1-204ENST00000380749 IGLV5-37A0A075B6J1 123 aa10.21□□□□□ -0.78
HMGN1-204ENST00000380749 ATP5LO75964 103 aa10.21□□□□□ -0.78
HMGN1-204ENST00000380749 CRYGAP11844 174 aa10.21□□□□□ -0.78
HMGN1-204ENST00000380749 SEC11CQ9BY50 192 aa10.21□□□□□ -0.78
HMGN1-204ENST00000380749 A0A087X002 238 aa10.2□□□□□ -0.78
HMGN1-204ENST00000380749 TSPAN13O95857 204 aa10.19□□□□□ -0.78
HMGN1-204ENST00000380749 UBE2AP49459 152 aa10.19□□□□□ -0.78
HMGN1-204ENST00000380749 TYMSOSQ8TAI1 123 aa10.19□□□□□ -0.78
HMGN1-204ENST00000380749 FABP9Q0Z7S8 132 aa10.18□□□□□ -0.78
HMGN1-204ENST00000380749 IGLC3P0DOY3 106 aa10.16□□□□□ -0.78
HMGN1-204ENST00000380749 PFN2P35080 140 aa10.15□□□□□ -0.78
HMGN1-204ENST00000380749 IGKV2-28A0A075B6P5 120 aa10.14□□□□□ -0.79
HMGN1-204ENST00000380749 IGLV5-39A0A0G2JS06 123 aa10.14□□□□□ -0.79
HMGN1-204ENST00000380749 IGKV2D-28P01615 120 aa10.14□□□□□ -0.79
HMGN1-204ENST00000380749 NDUFA6P56556 154 aa10.14□□□□□ -0.79
HMGN1-204ENST00000380749 KRTAP13-1Q8IUC0 172 aa10.14□□□□□ -0.79
HMGN1-204ENST00000380749 IFITM2Q01629 132 aa10.14□□□□□ -0.79
HMGN1-204ENST00000380749 RHEBQ15382 184 aa10.14□□□□□ -0.79
HMGN1-204ENST00000380749 ZNF22P17026 224 aaPredicted RBP10.13□□□□□ -0.79
HMGN1-204ENST00000380749 FAM229BQ4G0N7 80 aa10.13□□□□□ -0.79
HMGN1-204ENST00000380749 ERG28Q9UKR5 140 aa10.13□□□□□ -0.79
HMGN1-204ENST00000380749 SCO1O75880 301 aa10.12□□□□□ -0.79
HMGN1-204ENST00000380749 HBDP02042 147 aa10.12□□□□□ -0.79
HMGN1-204ENST00000380749 COMMD7Q86VX2 200 aa10.12□□□□□ -0.79
HMGN1-204ENST00000380749 A0A096LNJ9 63 aa10.11□□□□□ -0.79
HMGN1-204ENST00000380749 RPL24P83731 157 aaKnown RBP10.11□□□□□ -0.79
HMGN1-204ENST00000380749 COX17Q14061 63 aa10.11□□□□□ -0.79
HMGN1-204ENST00000380749 SFTA2Q6UW10 78 aa10.11□□□□□ -0.79
HMGN1-204ENST00000380749 SND1-IT1Q9HBX3 110 aa10.11□□□□□ -0.79
HMGN1-204ENST00000380749 RPS10P5Q9NQ39 176 aa10.11□□□□□ -0.79
HMGN1-204ENST00000380749 ANAPC11Q9NYG5 84 aa10.11□□□□□ -0.79
HMGN1-204ENST00000380749 A0A0U1RQV1 116 aa10.1□□□□□ -0.79
HMGN1-204ENST00000380749 VPREB1P12018 145 aa10.1□□□□□ -0.79
HMGN1-204ENST00000380749 PRLHP81277 87 aa10.1□□□□□ -0.79
HMGN1-204ENST00000380749 KRTAP13-2Q52LG2 175 aa10.09□□□□□ -0.79
HMGN1-204ENST00000380749 FAM19A1Q7Z5A9 133 aa10.09□□□□□ -0.79
HMGN1-204ENST00000380749 LINC00304Q8N9R0 145 aa10.09□□□□□ -0.79
HMGN1-204ENST00000380749 C18orf32Q8TCD1 76 aa10.09□□□□□ -0.79
HMGN1-204ENST00000380749 TMEM126AQ9H061 195 aa10.09□□□□□ -0.79
HMGN1-204ENST00000380749 MUC17Q685J3 4493 aa10.08□□□□□ -0.8
HMGN1-204ENST00000380749 LINC00614P0C842 121 aa10.08□□□□□ -0.8
HMGN1-204ENST00000380749 C10orf91Q5T1B1 145 aa10.08□□□□□ -0.8
HMGN1-204ENST00000380749 TRAPPC1Q9Y5R8 145 aa10.08□□□□□ -0.8
HMGN1-204ENST00000380749 IGKV2D-26A0A0A0MRZ7 120 aa10.07□□□□□ -0.8
HMGN1-204ENST00000380749 ZNF625Q96I27 306 aaPredicted RBP10.07□□□□□ -0.8
HMGN1-204ENST00000380749 C11orf86A6NJI1 115 aa10.06□□□□□ -0.8
HMGN1-204ENST00000380749 TMEM238C9JI98 176 aa10.06□□□□□ -0.8
HMGN1-204ENST00000380749 PMCHL1Q16048 86 aa10.06□□□□□ -0.8
HMGN1-204ENST00000380749 TMEM170BQ5T4T1 132 aa10.06□□□□□ -0.8
HMGN1-204ENST00000380749 BAGE3Q86Y29 109 aa10.06□□□□□ -0.8
HMGN1-204ENST00000380749 URB1-AS1Q96HZ7 61 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms