RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 TRGV4A0A0C4DH28 118 aa8.85□□□□□ -0.99
PRPF40B-202ENST00000380281 TEP1Q99973 2627 aaKnown RBP8.85□□□□□ -0.99
PRPF40B-202ENST00000380281 DSCR9P59020 149 aa8.84□□□□□ -0.99
PRPF40B-202ENST00000380281 TRAV23DV6A0A075B6W5 121 aa8.84□□□□□ -0.99
PRPF40B-202ENST00000380281 A0A096LNT2 108 aa8.84□□□□□ -0.99
PRPF40B-202ENST00000380281 CCL24O00175 119 aa8.84□□□□□ -0.99
PRPF40B-202ENST00000380281 MRAPQ8TCY5 172 aa8.84□□□□□ -0.99
PRPF40B-202ENST00000380281 A0A087WYN8 130 aa8.83□□□□□ -1
PRPF40B-202ENST00000380281 SMIM1B2RUZ4 78 aa8.83□□□□□ -1
PRPF40B-202ENST00000380281 J3QLI3 93 aa8.83□□□□□ -1
PRPF40B-202ENST00000380281 NCR3O14931 201 aa8.83□□□□□ -1
PRPF40B-202ENST00000380281 NDUFA1O15239 70 aa8.83□□□□□ -1
PRPF40B-202ENST00000380281 C20orf197Q8N268 126 aa8.83□□□□□ -1
PRPF40B-202ENST00000380281 TIMM17BO60830 172 aa8.83□□□□□ -1
PRPF40B-202ENST00000380281 K7EQD1 137 aa8.82□□□□□ -1
PRPF40B-202ENST00000380281 DEFB4AO15263 64 aa8.82□□□□□ -1
PRPF40B-202ENST00000380281 MIR7-3HGQ8N6C7 128 aa8.82□□□□□ -1
PRPF40B-202ENST00000380281 UNC79Q9P2D8 2635 aa8.82□□□□□ -1
PRPF40B-202ENST00000380281 GHRHP01286 108 aa8.81□□□□□ -1
PRPF40B-202ENST00000380281 SLPIP03973 132 aa8.81□□□□□ -1
PRPF40B-202ENST00000380281 RNASE1P07998 156 aaKnown RBP8.81□□□□□ -1
PRPF40B-202ENST00000380281 FAM222AQ5U5X8 452 aa8.81□□□□□ -1
PRPF40B-202ENST00000380281 C4orf3Q8WVX3 66 aa8.81□□□□□ -1
PRPF40B-202ENST00000380281 TMEM243Q9BU79 118 aa8.81□□□□□ -1
PRPF40B-202ENST00000380281 TENM4Q6N022 2769 aa8.81□□□□□ -1
PRPF40B-202ENST00000380281 Q6JHZ5 121 aa8.81□□□□□ -1
PRPF40B-202ENST00000380281 IGLV4-60A0A075B6I1 120 aa8.81□□□□□ -1
PRPF40B-202ENST00000380281 RPL28P46779 137 aaKnown RBP8.8□□□□□ -1
PRPF40B-202ENST00000380281 DNAJC9-AS1A6NH13 148 aa8.8□□□□□ -1
PRPF40B-202ENST00000380281 DEFB113Q30KQ7 82 aa8.79□□□□□ -1
PRPF40B-202ENST00000380281 XCL1P47992 114 aa8.79□□□□□ -1
PRPF40B-202ENST00000380281 FAM19A1Q7Z5A9 133 aa8.79□□□□□ -1
PRPF40B-202ENST00000380281 PAX4O43316 350 aa8.79□□□□□ -1
PRPF40B-202ENST00000380281 CDC42SE2Q9NRR3 84 aa8.79□□□□□ -1
PRPF40B-202ENST00000380281 PRO0628Q9UI54 55 aa8.79□□□□□ -1
PRPF40B-202ENST00000380281 IGLV10-54A0A075B6I4 117 aa8.78□□□□□ -1
PRPF40B-202ENST00000380281 TENM1Q9UKZ4 2725 aa8.78□□□□□ -1
PRPF40B-202ENST00000380281 LINC00337Q8N6G1 96 aa8.77□□□□□ -1
PRPF40B-202ENST00000380281 HIVEP1P15822 2718 aa8.77□□□□□ -1.01
PRPF40B-202ENST00000380281 LECT2O14960 151 aa8.77□□□□□ -1.01
PRPF40B-202ENST00000380281 PRR3P79522 188 aaKnown RBP8.77□□□□□ -1.01
PRPF40B-202ENST00000380281 PDZD2O15018 2839 aa8.77□□□□□ -1.01
PRPF40B-202ENST00000380281 FAM236DA0A1B0GTK5 79 aa8.77□□□□□ -1.01
PRPF40B-202ENST00000380281 FAM236CP0DP71 79 aa8.77□□□□□ -1.01
PRPF40B-202ENST00000380281 SND1-IT1Q9HBX3 110 aa8.77□□□□□ -1.01
PRPF40B-202ENST00000380281 CRPP02741 224 aa8.76□□□□□ -1.01
PRPF40B-202ENST00000380281 ENHOQ6UWT2 76 aa8.76□□□□□ -1.01
PRPF40B-202ENST00000380281 A0A0U1RQV1 116 aa8.75□□□□□ -1.01
PRPF40B-202ENST00000380281 SMIM11BQ8TCY0 68 aa8.75□□□□□ -1.01
PRPF40B-202ENST00000380281 IGLV5-39A0A0G2JS06 123 aa8.74□□□□□ -1.01
PRPF40B-202ENST00000380281 C6orf226Q5I0X4 101 aa8.74□□□□□ -1.01
PRPF40B-202ENST00000380281 Q8N3U1 123 aa8.74□□□□□ -1.01
PRPF40B-202ENST00000380281 COX7B2Q8TF08 81 aa8.74□□□□□ -1.01
PRPF40B-202ENST00000380281 SMR3AQ99954 134 aa8.74□□□□□ -1.01
PRPF40B-202ENST00000380281 F8P00451 2351 aa8.74□□□□□ -1.01
PRPF40B-202ENST00000380281 FLNBO75369 2602 aaKnown RBP8.73□□□□□ -1.01
PRPF40B-202ENST00000380281 IGKV2-28A0A075B6P5 120 aa8.73□□□□□ -1.01
PRPF40B-202ENST00000380281 NDUFC2O95298 119 aa8.73□□□□□ -1.01
PRPF40B-202ENST00000380281 FSHBP01225 129 aa8.73□□□□□ -1.01
PRPF40B-202ENST00000380281 IGKV2D-28P01615 120 aa8.73□□□□□ -1.01
PRPF40B-202ENST00000380281 HTN3P15516 51 aa8.73□□□□□ -1.01
PRPF40B-202ENST00000380281 GIG44P09565 113 aaPredicted RBP8.73□□□□□ -1.01
PRPF40B-202ENST00000380281 SNURFQ9Y675 71 aa8.72□□□□□ -1.01
PRPF40B-202ENST00000380281 IGLV5-45A0A087WSX0 123 aa8.71□□□□□ -1.01
PRPF40B-202ENST00000380281 TRAV13-2A0A0B4J235 113 aa8.71□□□□□ -1.01
PRPF40B-202ENST00000380281 LINC00482Q8N8I6 264 aa8.71□□□□□ -1.01
PRPF40B-202ENST00000380281 LINC01006Q8NI28 216 aa8.71□□□□□ -1.01
PRPF40B-202ENST00000380281 COPS9Q8WXC6 57 aa8.71□□□□□ -1.01
PRPF40B-202ENST00000380281 CCL18P55774 89 aa8.71□□□□□ -1.02
PRPF40B-202ENST00000380281 LINC00474Q9P2X8 69 aa8.71□□□□□ -1.02
PRPF40B-202ENST00000380281 GYPEP15421 78 aa8.7□□□□□ -1.02
PRPF40B-202ENST00000380281 ZNF843Q8N446 348 aa8.7□□□□□ -1.02
PRPF40B-202ENST00000380281 H7BZZ5 65 aa8.7□□□□□ -1.02
PRPF40B-202ENST00000380281 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
PRPF40B-202ENST00000380281 PKD1L1Q8TDX9 2849 aa8.7□□□□□ -1.02
PRPF40B-202ENST00000380281 OTOGQ6ZRI0 2925 aa8.69□□□□□ -1.02
PRPF40B-202ENST00000380281 A8MTW9 85 aa8.69□□□□□ -1.02
PRPF40B-202ENST00000380281 FP248Q71RG6 208 aaPredicted RBP8.69□□□□□ -1.02
PRPF40B-202ENST00000380281 TMEM86BQ8N661 226 aa8.69□□□□□ -1.02
PRPF40B-202ENST00000380281 BRK1Q8WUW1 75 aa8.69□□□□□ -1.02
PRPF40B-202ENST00000380281 SERP1Q9Y6X1 66 aa8.69□□□□□ -1.02
PRPF40B-202ENST00000380281 TRBV10-1A0A0K0K1A3 114 aa8.69□□□□□ -1.02
PRPF40B-202ENST00000380281 OBSCN-AS1Q96MR7 158 aa8.69□□□□□ -1.02
PRPF40B-202ENST00000380281 LYPD5Q6UWN5 251 aa8.68□□□□□ -1.02
PRPF40B-202ENST00000380281 TRBV6-8A0A0A6YYG3 113 aa8.68□□□□□ -1.02
PRPF40B-202ENST00000380281 NDUFC2-KCTD14E9PQ53 114 aa8.68□□□□□ -1.02
PRPF40B-202ENST00000380281 SS18Q15532 418 aa8.68□□□□□ -1.02
PRPF40B-202ENST00000380281 RMI2Q96E14 147 aa8.68□□□□□ -1.02
PRPF40B-202ENST00000380281 PLAC8L1A1L4L8 177 aa8.67□□□□□ -1.02
PRPF40B-202ENST00000380281 C16orf95Q9H693 158 aa8.67□□□□□ -1.02
PRPF40B-202ENST00000380281 NOTCH1P46531 2555 aa8.67□□□□□ -1.02
PRPF40B-202ENST00000380281 F8WDY8 70 aa8.67□□□□□ -1.02
PRPF40B-202ENST00000380281 CCKP06307 115 aa8.67□□□□□ -1.02
PRPF40B-202ENST00000380281 PF4P02776 101 aa8.67□□□□□ -1.02
PRPF40B-202ENST00000380281 C16orf74Q96GX8 76 aa8.66□□□□□ -1.02
PRPF40B-202ENST00000380281 SPATA3Q8NHX4 192 aa8.65□□□□□ -1.02
PRPF40B-202ENST00000380281 OVOL2Q9BRP0 275 aa8.65□□□□□ -1.02
PRPF40B-202ENST00000380281 ORMDL1Q9P0S3 153 aa8.65□□□□□ -1.02
PRPF40B-202ENST00000380281 F8WEM9 126 aa8.65□□□□□ -1.03
PRPF40B-202ENST00000380281 IGHV3OR16-9A0A0B4J2B5 98 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms