RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 RPL28P46779 137 aaKnown RBP13.68□□□□□ -0.22
U2AF1-202ENST00000380276 AMELXQ99217 191 aa13.68□□□□□ -0.22
U2AF1-202ENST00000380276 MUC2Q02817 5179 aa13.67□□□□□ -0.22
U2AF1-202ENST00000380276 PRSS47A8MTI9 375 aa13.67□□□□□ -0.22
U2AF1-202ENST00000380276 ORMDL2Q53FV1 153 aa13.67□□□□□ -0.22
U2AF1-202ENST00000380276 MRPL55Q7Z7F7 128 aaKnown RBP13.67□□□□□ -0.22
U2AF1-202ENST00000380276 TYMSOSQ8TAI1 123 aa13.67□□□□□ -0.22
U2AF1-202ENST00000380276 GEMIN7Q9H840 131 aaKnown RBP13.66□□□□□ -0.22
U2AF1-202ENST00000380276 A0A087X002 238 aa13.65□□□□□ -0.22
U2AF1-202ENST00000380276 F8VRH5 84 aa13.65□□□□□ -0.22
U2AF1-202ENST00000380276 BCE1O60756 84 aa13.64□□□□□ -0.23
U2AF1-202ENST00000380276 CRYGAP11844 174 aa13.64□□□□□ -0.23
U2AF1-202ENST00000380276 HERVK_113P63121 156 aa13.64□□□□□ -0.23
U2AF1-202ENST00000380276 CDKN2A-AS1Q9UH64 79 aa13.64□□□□□ -0.23
U2AF1-202ENST00000380276 RPL37AP8A6NKH3 93 aa13.63□□□□□ -0.23
U2AF1-202ENST00000380276 SEC11AP67812 179 aa13.63□□□□□ -0.23
U2AF1-202ENST00000380276 TP73-AS1Q9UF72 201 aa13.62□□□□□ -0.23
U2AF1-202ENST00000380276 GAGE10A6NGK3 116 aa13.61□□□□□ -0.23
U2AF1-202ENST00000380276 IGIPA6NJ69 53 aa13.61□□□□□ -0.23
U2AF1-202ENST00000380276 PAPPA-AS1Q5QFB9 102 aa13.61□□□□□ -0.23
U2AF1-202ENST00000380276 NPSP0C0P6 89 aa13.6□□□□□ -0.23
U2AF1-202ENST00000380276 CXCL5P42830 114 aa13.6□□□□□ -0.23
U2AF1-202ENST00000380276 FAM19A3Q7Z5A8 133 aa13.6□□□□□ -0.23
U2AF1-202ENST00000380276 ANAPC11Q9NYG5 84 aa13.6□□□□□ -0.23
U2AF1-202ENST00000380276 LINC00167Q96N53 147 aa13.59□□□□□ -0.23
U2AF1-202ENST00000380276 NXT2Q9NPJ8 142 aaKnown RBP13.58□□□□□ -0.24
U2AF1-202ENST00000380276 K7EMI3 77 aa13.57□□□□□ -0.24
U2AF1-202ENST00000380276 UBE2AP49459 152 aa13.57□□□□□ -0.24
U2AF1-202ENST00000380276 MT-ND4LP03901 98 aa13.55□□□□□ -0.24
U2AF1-202ENST00000380276 G0S2P27469 103 aa13.55□□□□□ -0.24
U2AF1-202ENST00000380276 NKAPP1Q8N9T2 125 aa13.55□□□□□ -0.24
U2AF1-202ENST00000380276 COX7B2Q8TF08 81 aa13.55□□□□□ -0.24
U2AF1-202ENST00000380276 ANAPC16Q96DE5 110 aa13.55□□□□□ -0.24
U2AF1-202ENST00000380276 RETNLBQ9BQ08 111 aa13.55□□□□□ -0.24
U2AF1-202ENST00000380276 KRTAP9-2Q9BYQ4 174 aa13.55□□□□□ -0.24
U2AF1-202ENST00000380276 RAB5BP61020 215 aa13.54□□□□□ -0.24
U2AF1-202ENST00000380276 TIMM17AQ99595 171 aa13.54□□□□□ -0.24
U2AF1-202ENST00000380276 SMIM1B2RUZ4 78 aa13.53□□□□□ -0.24
U2AF1-202ENST00000380276 PNRC1Q12796 327 aaPredicted RBP13.52□□□□□ -0.25
U2AF1-202ENST00000380276 TOMM6Q96B49 74 aa13.52□□□□□ -0.25
U2AF1-202ENST00000380276 SCGB3A1Q96QR1 104 aa13.52□□□□□ -0.25
U2AF1-202ENST00000380276 A0A1B0GVG6 124 aa13.51□□□□□ -0.25
U2AF1-202ENST00000380276 KRTAP13-2Q52LG2 175 aa13.5□□□□□ -0.25
U2AF1-202ENST00000380276 PDZD11Q5EBL8 140 aa13.5□□□□□ -0.25
U2AF1-202ENST00000380276 KIAA1644Q3SXP7 199 aa13.49□□□□□ -0.25
U2AF1-202ENST00000380276 LINC00304Q8N9R0 145 aa13.49□□□□□ -0.25
U2AF1-202ENST00000380276 IGKV2-28A0A075B6P5 120 aa13.48□□□□□ -0.25
U2AF1-202ENST00000380276 IGKV2D-28P01615 120 aa13.48□□□□□ -0.25
U2AF1-202ENST00000380276 SPINK8P0C7L1 97 aa13.48□□□□□ -0.25
U2AF1-202ENST00000380276 ERASQ7Z444 233 aa13.48□□□□□ -0.25
U2AF1-202ENST00000380276 TINCRA0A1B0GVN0 87 aa13.47□□□□□ -0.25
U2AF1-202ENST00000380276 CDIP1Q9H305 208 aa13.47□□□□□ -0.25
U2AF1-202ENST00000380276 IGKV2D-26A0A0A0MRZ7 120 aa13.46□□□□□ -0.25
U2AF1-202ENST00000380276 SCO1O75880 301 aa13.46□□□□□ -0.25
U2AF1-202ENST00000380276 ADCYAP1P18509 176 aa13.46□□□□□ -0.25
U2AF1-202ENST00000380276 LCE2CQ5TA81 110 aa13.46□□□□□ -0.25
U2AF1-202ENST00000380276 IGLV5-37A0A075B6J1 123 aa13.45□□□□□ -0.26
U2AF1-202ENST00000380276 FAM229BQ4G0N7 80 aa13.44□□□□□ -0.26
U2AF1-202ENST00000380276 KRTAP13-1Q8IUC0 172 aa13.44□□□□□ -0.26
U2AF1-202ENST00000380276 ATP5LO75964 103 aa13.43□□□□□ -0.26
U2AF1-202ENST00000380276 PRLHP81277 87 aa13.43□□□□□ -0.26
U2AF1-202ENST00000380276 FAT4Q6V0I7 4981 aa13.43□□□□□ -0.26
U2AF1-202ENST00000380276 PFN2P35080 140 aa13.42□□□□□ -0.26
U2AF1-202ENST00000380276 FAM19A1Q7Z5A9 133 aa13.42□□□□□ -0.26
U2AF1-202ENST00000380276 IGLV5-45A0A087WSX0 123 aa13.41□□□□□ -0.26
U2AF1-202ENST00000380276 IGLV7-46A0A075B6I9 117 aa13.4□□□□□ -0.26
U2AF1-202ENST00000380276 LCE2AQ5TA79 106 aaPredicted RBP13.4□□□□□ -0.26
U2AF1-202ENST00000380276 CST9LQ9H4G1 147 aa13.4□□□□□ -0.26
U2AF1-202ENST00000380276 H3BRM9 83 aa13.39□□□□□ -0.27
U2AF1-202ENST00000380276 RAB14P61106 215 aa13.37□□□□□ -0.27
U2AF1-202ENST00000380276 PMVKQ15126 192 aa13.37□□□□□ -0.27
U2AF1-202ENST00000380276 MRPL18Q9H0U6 180 aaKnown RBP13.37□□□□□ -0.27
U2AF1-202ENST00000380276 LINC01549A6NIU2 74 aa13.36□□□□□ -0.27
U2AF1-202ENST00000380276 TMEM238C9JI98 176 aa13.36□□□□□ -0.27
U2AF1-202ENST00000380276 TPRXLQ17RH7 258 aa13.36□□□□□ -0.27
U2AF1-202ENST00000380276 TMEM126AQ9H061 195 aa13.36□□□□□ -0.27
U2AF1-202ENST00000380276 SMCO4Q9NRQ5 59 aa13.34□□□□□ -0.27
U2AF1-202ENST00000380276 NDUFA6P56556 154 aa13.33□□□□□ -0.28
U2AF1-202ENST00000380276 FA2HQ7L5A8 372 aa13.33□□□□□ -0.28
U2AF1-202ENST00000380276 MUC17Q685J3 4493 aa13.33□□□□□ -0.28
U2AF1-202ENST00000380276 VPREB1P12018 145 aa13.32□□□□□ -0.28
U2AF1-202ENST00000380276 RPL24P83731 157 aaKnown RBP13.32□□□□□ -0.28
U2AF1-202ENST00000380276 SND1-IT1Q9HBX3 110 aa13.32□□□□□ -0.28
U2AF1-202ENST00000380276 CBLN2Q8IUK8 224 aa13.31□□□□□ -0.28
U2AF1-202ENST00000380276 C3orf22Q8N5N4 141 aa13.31□□□□□ -0.28
U2AF1-202ENST00000380276 ZNF625Q96I27 306 aaPredicted RBP13.31□□□□□ -0.28
U2AF1-202ENST00000380276 ERG28Q9UKR5 140 aa13.31□□□□□ -0.28
U2AF1-202ENST00000380276 HIGD2AQ9BW72 106 aa13.3□□□□□ -0.28
U2AF1-202ENST00000380276 PPDPFQ9H3Y8 114 aa13.3□□□□□ -0.28
U2AF1-202ENST00000380276 M0R378 163 aa13.29□□□□□ -0.28
U2AF1-202ENST00000380276 PLEKHB2Q96CS7 222 aa13.28□□□□□ -0.28
U2AF1-202ENST00000380276 TRAV9-1A0A075B6T8 112 aa13.27□□□□□ -0.29
U2AF1-202ENST00000380276 LINC01546A6NGU7 62 aa13.27□□□□□ -0.29
U2AF1-202ENST00000380276 S100PP25815 95 aa13.27□□□□□ -0.29
U2AF1-202ENST00000380276 IGLC3P0DOY3 106 aa13.26□□□□□ -0.29
U2AF1-202ENST00000380276 GNB1LQ9BYB4 327 aa13.26□□□□□ -0.29
U2AF1-202ENST00000380276 IGLV5-39A0A0G2JS06 123 aa13.25□□□□□ -0.29
U2AF1-202ENST00000380276 ZNF22P17026 224 aaPredicted RBP13.25□□□□□ -0.29
U2AF1-202ENST00000380276 CTAG1AP78358 180 aa13.25□□□□□ -0.29
U2AF1-202ENST00000380276 KRTAP9-6A0A140TA67 174 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms