RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 TM2D3Q9BRN9 247 aa10.26□□□□□ -0.77
SNX2-201ENST00000379516 PSMB2P49721 201 aa10.25□□□□□ -0.77
SNX2-201ENST00000379516 SOSTDC1Q6X4U4 206 aa10.25□□□□□ -0.77
SNX2-201ENST00000379516 MALP21145 153 aa10.24□□□□□ -0.77
SNX2-201ENST00000379516 WFDC10BQ8IUB3 73 aa10.24□□□□□ -0.77
SNX2-201ENST00000379516 Q8IZM0 81 aa10.24□□□□□ -0.77
SNX2-201ENST00000379516 LINC00158P58513 81 aa10.24□□□□□ -0.77
SNX2-201ENST00000379516 PRR34Q9NV39 138 aa10.24□□□□□ -0.77
SNX2-201ENST00000379516 FOXI1Q12951 378 aa10.23□□□□□ -0.77
SNX2-201ENST00000379516 ESRGQ1W209 222 aa10.23□□□□□ -0.77
SNX2-201ENST00000379516 MIR7-3HGQ8N6C7 128 aa10.23□□□□□ -0.77
SNX2-201ENST00000379516 IBA57-AS1B1ANH7 110 aa10.22□□□□□ -0.77
SNX2-201ENST00000379516 ENHOQ6UWT2 76 aa10.22□□□□□ -0.77
SNX2-201ENST00000379516 GAGE12HA6NDE8 117 aa10.22□□□□□ -0.77
SNX2-201ENST00000379516 PFN2P35080 140 aa10.22□□□□□ -0.77
SNX2-201ENST00000379516 F8W1H4 67 aa10.21□□□□□ -0.77
SNX2-201ENST00000379516 TCL1BO95988 128 aa10.21□□□□□ -0.77
SNX2-201ENST00000379516 CRPP02741 224 aa10.21□□□□□ -0.77
SNX2-201ENST00000379516 RPL13AP40429 203 aaKnown RBP10.21□□□□□ -0.77
SNX2-201ENST00000379516 CKS1BP61024 79 aa10.21□□□□□ -0.77
SNX2-201ENST00000379516 C2orf82Q6UX34 121 aa10.21□□□□□ -0.77
SNX2-201ENST00000379516 MTURNQ8N3F0 131 aa10.21□□□□□ -0.77
SNX2-201ENST00000379516 UBE2WQ96B02 151 aa10.21□□□□□ -0.77
SNX2-201ENST00000379516 TRBV20-1A0A075B6N2 111 aa10.21□□□□□ -0.78
SNX2-201ENST00000379516 CFAP161Q6P656 301 aa10.2□□□□□ -0.78
SNX2-201ENST00000379516 MGAM2Q2M2H8 2515 aa10.2□□□□□ -0.78
SNX2-201ENST00000379516 TRAV10A0A0B4J240 114 aa10.19□□□□□ -0.78
SNX2-201ENST00000379516 WFDC2Q14508 124 aa10.19□□□□□ -0.78
SNX2-201ENST00000379516 KIAA0087Q14695 138 aa10.19□□□□□ -0.78
SNX2-201ENST00000379516 TRBV30A0A0K0K1B3 111 aa10.19□□□□□ -0.78
SNX2-201ENST00000379516 TRIAP1O43715 76 aa10.19□□□□□ -0.78
SNX2-201ENST00000379516 PPDPFQ9H3Y8 114 aa10.19□□□□□ -0.78
SNX2-201ENST00000379516 OCIAD2Q56VL3 154 aa10.18□□□□□ -0.78
SNX2-201ENST00000379516 PRO0461Q9UI25 63 aa10.18□□□□□ -0.78
SNX2-201ENST00000379516 HUWE1Q7Z6Z7 4374 aaKnown RBP10.18□□□□□ -0.78
SNX2-201ENST00000379516 TRAV8-4A0A0B4J246 113 aa10.17□□□□□ -0.78
SNX2-201ENST00000379516 CXCL5P42830 114 aa10.17□□□□□ -0.78
SNX2-201ENST00000379516 SND1-IT1Q9HBX3 110 aa10.16□□□□□ -0.78
SNX2-201ENST00000379516 CCL18P55774 89 aa10.16□□□□□ -0.78
SNX2-201ENST00000379516 KLK5Q9Y337 293 aaPredicted RBP10.16□□□□□ -0.78
SNX2-201ENST00000379516 COX6CP09669 75 aa10.15□□□□□ -0.78
SNX2-201ENST00000379516 SPAG11BQ08648 103 aa10.15□□□□□ -0.79
SNX2-201ENST00000379516 C15orf53Q8NAA6 179 aa10.15□□□□□ -0.79
SNX2-201ENST00000379516 K7ERU9 68 aa10.13□□□□□ -0.79
SNX2-201ENST00000379516 C6orf223Q8N319 242 aa10.13□□□□□ -0.79
SNX2-201ENST00000379516 ATXN8Q156A1 80 aa10.13□□□□□ -0.79
SNX2-201ENST00000379516 LINC01556Q5JQF7 62 aa10.13□□□□□ -0.79
SNX2-201ENST00000379516 LINC00526Q96FQ7 95 aa10.13□□□□□ -0.79
SNX2-201ENST00000379516 ETDBQ3ZM63 59 aa10.12□□□□□ -0.79
SNX2-201ENST00000379516 IGKV2-28A0A075B6P5 120 aa10.12□□□□□ -0.79
SNX2-201ENST00000379516 TRAV13-2A0A0B4J235 113 aa10.12□□□□□ -0.79
SNX2-201ENST00000379516 IGKV2D-28P01615 120 aa10.12□□□□□ -0.79
SNX2-201ENST00000379516 SMCPP49901 116 aaPredicted RBP10.12□□□□□ -0.79
SNX2-201ENST00000379516 COX17Q14061 63 aa10.12□□□□□ -0.79
SNX2-201ENST00000379516 C9orf116Q5BN46 136 aaPredicted RBP10.12□□□□□ -0.79
SNX2-201ENST00000379516 UNQ6190/PRO20217Q6UXQ8 127 aa10.11□□□□□ -0.79
SNX2-201ENST00000379516 C10orf25Q5T742 122 aa10.1□□□□□ -0.79
SNX2-201ENST00000379516 RNF151Q2KHN1 245 aa10.1□□□□□ -0.79
SNX2-201ENST00000379516 LINC00337Q8N6G1 96 aa10.1□□□□□ -0.79
SNX2-201ENST00000379516 CLEC2BQ92478 149 aa10.1□□□□□ -0.79
SNX2-201ENST00000379516 C9JAW5 83 aa10.09□□□□□ -0.79
SNX2-201ENST00000379516 KRTAP26-1Q6PEX3 210 aa10.09□□□□□ -0.79
SNX2-201ENST00000379516 LINC00588Q9Y4M8 146 aa10.09□□□□□ -0.79
SNX2-201ENST00000379516 DNAH10OSP0CZ25 163 aa10.08□□□□□ -0.8
SNX2-201ENST00000379516 LINC01620Q4KN68 170 aa10.08□□□□□ -0.8
SNX2-201ENST00000379516 C1orf43Q9BWL3 253 aa10.08□□□□□ -0.8
SNX2-201ENST00000379516 SLC25A20O43772 301 aa10.07□□□□□ -0.8
SNX2-201ENST00000379516 IGKV2D-24A0A075B6R9 120 aa10.06□□□□□ -0.8
SNX2-201ENST00000379516 NTN5Q8WTR8 489 aaPredicted RBP10.06□□□□□ -0.8
SNX2-201ENST00000379516 ZNF561-AS1K7EIQ3 104 aa10.06□□□□□ -0.8
SNX2-201ENST00000379516 LST1O00453 97 aa10.06□□□□□ -0.8
SNX2-201ENST00000379516 HIGD2BQ4VC39 106 aa10.06□□□□□ -0.8
SNX2-201ENST00000379516 OR13C6PQ8NH95 151 aa10.05□□□□□ -0.8
SNX2-201ENST00000379516 B9D2Q9BPU9 175 aa10.05□□□□□ -0.8
SNX2-201ENST00000379516 Q9HAA7 133 aa10.05□□□□□ -0.8
SNX2-201ENST00000379516 DNAH9Q9NYC9 4486 aa10.05□□□□□ -0.8
SNX2-201ENST00000379516 RPL28P46779 137 aaKnown RBP10.04□□□□□ -0.8
SNX2-201ENST00000379516 TRBV10-2A0A0K0K1G8 114 aa10.03□□□□□ -0.8
SNX2-201ENST00000379516 SMIM11BQ8TCY0 68 aa10.03□□□□□ -0.8
SNX2-201ENST00000379516 GVQW2A0A096LPI5 108 aaPredicted RBP10.03□□□□□ -0.8
SNX2-201ENST00000379516 PRR3P79522 188 aaKnown RBP10.03□□□□□ -0.8
SNX2-201ENST00000379516 C15orf56Q8N910 161 aa10.03□□□□□ -0.8
SNX2-201ENST00000379516 C6orf48Q9UBA6 75 aa10.03□□□□□ -0.8
SNX2-201ENST00000379516 TEN1Q86WV5 123 aa10.02□□□□□ -0.81
SNX2-201ENST00000379516 ANKRD29Q8N6D5 301 aa10.02□□□□□ -0.81
SNX2-201ENST00000379516 CAMK2N2Q96S95 79 aa10.02□□□□□ -0.81
SNX2-201ENST00000379516 VPS25Q9BRG1 176 aa10.02□□□□□ -0.81
SNX2-201ENST00000379516 NDUFC2O95298 119 aa10.01□□□□□ -0.81
SNX2-201ENST00000379516 MUC7Q8TAX7 377 aa10.01□□□□□ -0.81
SNX2-201ENST00000379516 J3QR89 54 aa10.01□□□□□ -0.81
SNX2-201ENST00000379516 M0QXV9 152 aa10.01□□□□□ -0.81
SNX2-201ENST00000379516 COL7A1Q02388 2944 aa10□□□□□ -0.81
SNX2-201ENST00000379516 Q8NDZ9 215 aa9.98□□□□□ -0.81
SNX2-201ENST00000379516 UPK3BQ9BT76 320 aa9.98□□□□□ -0.81
SNX2-201ENST00000379516 Q6ZRU5 148 aa9.98□□□□□ -0.81
SNX2-201ENST00000379516 PPDPFLQ8WWR9 84 aa9.98□□□□□ -0.81
SNX2-201ENST00000379516 C2orf48Q96LS8 159 aa9.98□□□□□ -0.81
SNX2-201ENST00000379516 CARD19Q96LW7 228 aa9.98□□□□□ -0.81
SNX2-201ENST00000379516 FAM218AQ96MZ4 157 aa9.98□□□□□ -0.81
SNX2-201ENST00000379516 NCR3O14931 201 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms