RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 IGLV1-47P01700 117 aa6.34□□□□□ -1.39
LIG3-202ENST00000378526 LINC00574Q9H8X3 128 aa6.34□□□□□ -1.39
LIG3-202ENST00000378526 LINC01600Q96MT4 127 aa6.34□□□□□ -1.39
LIG3-202ENST00000378526 FSTL3O95633 263 aa6.34□□□□□ -1.39
LIG3-202ENST00000378526 CCDC168Q8NDH2 2452 aa6.34□□□□□ -1.39
LIG3-202ENST00000378526 C19orf84I3L1E1 186 aa6.33□□□□□ -1.4
LIG3-202ENST00000378526 IGKV2D-30A0A075B6S6 120 aa6.33□□□□□ -1.4
LIG3-202ENST00000378526 DEFB131BA0A096LNP1 70 aa6.33□□□□□ -1.4
LIG3-202ENST00000378526 IGKV2-30P06310 120 aa6.33□□□□□ -1.4
LIG3-202ENST00000378526 FHL2Q14192 279 aa6.33□□□□□ -1.4
LIG3-202ENST00000378526 CHCHD7Q9BUK0 85 aa6.33□□□□□ -1.4
LIG3-202ENST00000378526 KLKP1Q107X0 134 aa6.33□□□□□ -1.4
LIG3-202ENST00000378526 AVPP01185 164 aa6.32□□□□□ -1.4
LIG3-202ENST00000378526 KLLNB2CW77 178 aa6.32□□□□□ -1.4
LIG3-202ENST00000378526 ADAMTSL4-AS1Q5T5F5 129 aa6.32□□□□□ -1.4
LIG3-202ENST00000378526 LINC00242Q5T6M2 205 aa6.32□□□□□ -1.4
LIG3-202ENST00000378526 FAM215AQ9Y5M1 114 aa6.32□□□□□ -1.4
LIG3-202ENST00000378526 BDP1A6H8Y1 2624 aa6.32□□□□□ -1.4
LIG3-202ENST00000378526 A0A0A0MQY5 61 aa6.32□□□□□ -1.4
LIG3-202ENST00000378526 C11orf72Q8NBR9 251 aa6.32□□□□□ -1.4
LIG3-202ENST00000378526 AMELXQ99217 191 aa6.32□□□□□ -1.4
LIG3-202ENST00000378526 LINC00482Q8N8I6 264 aa6.32□□□□□ -1.4
LIG3-202ENST00000378526 TM2D3Q9BRN9 247 aa6.32□□□□□ -1.4
LIG3-202ENST00000378526 A8MUN3 132 aa6.32□□□□□ -1.4
LIG3-202ENST00000378526 DEFB4AO15263 64 aa6.32□□□□□ -1.4
LIG3-202ENST00000378526 SPRNQ5BIV9 151 aa6.32□□□□□ -1.4
LIG3-202ENST00000378526 COA5Q86WW8 74 aa6.31□□□□□ -1.4
LIG3-202ENST00000378526 LINC00310P59036 64 aa6.31□□□□□ -1.4
LIG3-202ENST00000378526 DEFB1P60022 68 aa6.3□□□□□ -1.4
LIG3-202ENST00000378526 CR1P17927 2039 aa6.3□□□□□ -1.4
LIG3-202ENST00000378526 SPATA3Q8NHX4 192 aa6.3□□□□□ -1.4
LIG3-202ENST00000378526 WDR87Q6ZQQ6 2873 aa6.29□□□□□ -1.4
LIG3-202ENST00000378526 ZFP36P26651 326 aaKnown RBP6.29□□□□□ -1.4
LIG3-202ENST00000378526 LY6G6EA0A0G2JKS1 128 aa6.29□□□□□ -1.4
LIG3-202ENST00000378526 FSHBP01225 129 aa6.29□□□□□ -1.4
LIG3-202ENST00000378526 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.29□□□□□ -1.4
LIG3-202ENST00000378526 IGLV8-61A0A075B6I0 122 aa6.29□□□□□ -1.4
LIG3-202ENST00000378526 CDC42SE1Q9NRR8 79 aa6.29□□□□□ -1.4
LIG3-202ENST00000378526 TSPEAR-AS2P59090 65 aa6.29□□□□□ -1.4
LIG3-202ENST00000378526 MAPK1IP1LQ8NDC0 245 aa6.29□□□□□ -1.4
LIG3-202ENST00000378526 PRO0461Q9UI25 63 aa6.29□□□□□ -1.4
LIG3-202ENST00000378526 Q8N2B8 174 aa6.28□□□□□ -1.4
LIG3-202ENST00000378526 ODF3BA8MYP8 253 aa6.28□□□□□ -1.4
LIG3-202ENST00000378526 DEFB114Q30KQ6 69 aa6.28□□□□□ -1.4
LIG3-202ENST00000378526 ZNF295-AS1Q8N0V1 137 aa6.28□□□□□ -1.4
LIG3-202ENST00000378526 Q6ZQT0 140 aa6.27□□□□□ -1.41
LIG3-202ENST00000378526 C2orf48Q96LS8 159 aa6.27□□□□□ -1.41
LIG3-202ENST00000378526 CACNA1AO00555 2505 aa6.27□□□□□ -1.41
LIG3-202ENST00000378526 DEFB116Q30KQ4 102 aa6.27□□□□□ -1.41
LIG3-202ENST00000378526 MOBPQ13875 183 aa6.27□□□□□ -1.41
LIG3-202ENST00000378526 Q6ZSV7 163 aa6.26□□□□□ -1.41
LIG3-202ENST00000378526 PIP4P1Q86T03 277 aa6.26□□□□□ -1.41
LIG3-202ENST00000378526 PROK1P58294 105 aa6.26□□□□□ -1.41
LIG3-202ENST00000378526 PSMG3-AS1Q96PY0 264 aa6.26□□□□□ -1.41
LIG3-202ENST00000378526 LINC01546A6NGU7 62 aa6.26□□□□□ -1.41
LIG3-202ENST00000378526 A0A1B0GUV1 79 aa6.26□□□□□ -1.41
LIG3-202ENST00000378526 COX6A2Q02221 97 aa6.26□□□□□ -1.41
LIG3-202ENST00000378526 ACACBO00763 2458 aa6.26□□□□□ -1.41
LIG3-202ENST00000378526 UNQ6190/PRO20217Q6UXQ8 127 aa6.25□□□□□ -1.41
LIG3-202ENST00000378526 LINC00337Q8N6G1 96 aa6.25□□□□□ -1.41
LIG3-202ENST00000378526 URB1-AS1Q96HZ7 61 aa6.25□□□□□ -1.41
LIG3-202ENST00000378526 SMCPP49901 116 aaPredicted RBP6.25□□□□□ -1.41
LIG3-202ENST00000378526 PRR3P79522 188 aaKnown RBP6.25□□□□□ -1.41
LIG3-202ENST00000378526 DAZAP2Q15038 168 aaPredicted RBP6.24□□□□□ -1.41
LIG3-202ENST00000378526 LRRK2Q5S007 2527 aa6.24□□□□□ -1.41
LIG3-202ENST00000378526 TMEM105Q8N8V8 129 aa6.24□□□□□ -1.41
LIG3-202ENST00000378526 BBC3Q96PG8 261 aaPredicted RBP6.24□□□□□ -1.41
LIG3-202ENST00000378526 RBM12B-AS1Q9P1G2 102 aa6.24□□□□□ -1.41
LIG3-202ENST00000378526 EPM2AB3EWF7 344 aa6.24□□□□□ -1.41
LIG3-202ENST00000378526 COX8CQ7Z4L0 72 aa6.23□□□□□ -1.41
LIG3-202ENST00000378526 CSNK1G2-AS1Q8NCQ2 148 aa6.23□□□□□ -1.41
LIG3-202ENST00000378526 Q8N7P7 452 aa6.23□□□□□ -1.41
LIG3-202ENST00000378526 DEFB113Q30KQ7 82 aa6.23□□□□□ -1.41
LIG3-202ENST00000378526 IGF2-ASQ6U949 168 aa6.23□□□□□ -1.41
LIG3-202ENST00000378526 Q1T7F1 81 aa6.22□□□□□ -1.41
LIG3-202ENST00000378526 LINC00313P59037 77 aa6.22□□□□□ -1.41
LIG3-202ENST00000378526 IGLV2-18A0A075B6J9 118 aa6.21□□□□□ -1.41
LIG3-202ENST00000378526 SPANXA2-OT1Q8N9U9 137 aa6.21□□□□□ -1.41
LIG3-202ENST00000378526 Q8NBF4 154 aa6.21□□□□□ -1.42
LIG3-202ENST00000378526 KIAA0087Q14695 138 aa6.21□□□□□ -1.42
LIG3-202ENST00000378526 COL27A1Q8IZC6 1860 aaPredicted RBP6.21□□□□□ -1.42
LIG3-202ENST00000378526 NUPR2A6NF83 97 aa6.2□□□□□ -1.42
LIG3-202ENST00000378526 GAS8-AS1O95177 125 aa6.2□□□□□ -1.42
LIG3-202ENST00000378526 H7BZZ5 65 aa6.19□□□□□ -1.42
LIG3-202ENST00000378526 C6orf223Q8N319 242 aa6.19□□□□□ -1.42
LIG3-202ENST00000378526 FAM229AH3BQW9 127 aa6.19□□□□□ -1.42
LIG3-202ENST00000378526 LYPD5Q6UWN5 251 aa6.19□□□□□ -1.42
LIG3-202ENST00000378526 TRBV7-4A0A0J9YYF1 115 aa6.18□□□□□ -1.42
LIG3-202ENST00000378526 C11orf71Q6IPW1 123 aa6.18□□□□□ -1.42
LIG3-202ENST00000378526 FN1P02751 2386 aaKnown RBP6.18□□□□□ -1.42
LIG3-202ENST00000378526 BRWD1-AS2P59051 145 aa6.18□□□□□ -1.42
LIG3-202ENST00000378526 PRO3102Q9H379 93 aa6.18□□□□□ -1.42
LIG3-202ENST00000378526 PRR9Q5T870 116 aa6.18□□□□□ -1.42
LIG3-202ENST00000378526 DMAC1Q96GE9 116 aa6.18□□□□□ -1.42
LIG3-202ENST00000378526 APLNQ9ULZ1 77 aa6.18□□□□□ -1.42
LIG3-202ENST00000378526 A8MWP4 228 aa6.17□□□□□ -1.42
LIG3-202ENST00000378526 C11orf21Q9P2W6 132 aa6.17□□□□□ -1.42
LIG3-202ENST00000378526 A0A096LNJ9 63 aa6.17□□□□□ -1.42
LIG3-202ENST00000378526 IGLV5-39A0A0G2JS06 123 aa6.17□□□□□ -1.42
LIG3-202ENST00000378526 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms