RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 NIPBLQ6KC79 2804 aaeCLIP9.76□□□□□ -0.85
MCF2L-204ENST00000375608 RPL18AQ02543 176 aaKnown RBP9.76□□□□□ -0.85
MCF2L-204ENST00000375608 Q6YL49 198 aa9.76□□□□□ -0.85
MCF2L-204ENST00000375608 ITPR3Q14573 2671 aa9.75□□□□□ -0.85
MCF2L-204ENST00000375608 FAM19A5Q7Z5A7 132 aaPredicted RBP9.75□□□□□ -0.85
MCF2L-204ENST00000375608 C9orf116Q5BN46 136 aaPredicted RBP9.75□□□□□ -0.85
MCF2L-204ENST00000375608 KIR2DL5BQ8NHK3 375 aa9.75□□□□□ -0.85
MCF2L-204ENST00000375608 PRORYQ9H606 182 aa9.75□□□□□ -0.85
MCF2L-204ENST00000375608 PF4P02776 101 aa9.74□□□□□ -0.85
MCF2L-204ENST00000375608 RPL28P46779 137 aaKnown RBP9.74□□□□□ -0.85
MCF2L-204ENST00000375608 A8MTW9 85 aa9.74□□□□□ -0.85
MCF2L-204ENST00000375608 CSDC2Q9Y534 153 aaKnown RBP9.74□□□□□ -0.85
MCF2L-204ENST00000375608 CSMD2Q7Z408 3487 aa9.74□□□□□ -0.85
MCF2L-204ENST00000375608 ZFHX3Q15911 3703 aa9.73□□□□□ -0.85
MCF2L-204ENST00000375608 BEAN1Q3B7T3 259 aa9.73□□□□□ -0.85
MCF2L-204ENST00000375608 LINC00269Q8N2A0 174 aa9.73□□□□□ -0.85
MCF2L-204ENST00000375608 SCXQ7RTU7 201 aa9.73□□□□□ -0.85
MCF2L-204ENST00000375608 C4orf3Q8WVX3 66 aa9.73□□□□□ -0.85
MCF2L-204ENST00000375608 IGKV2-28A0A075B6P5 120 aa9.73□□□□□ -0.85
MCF2L-204ENST00000375608 IGLV5-45A0A087WSX0 123 aa9.73□□□□□ -0.85
MCF2L-204ENST00000375608 J3QLI3 93 aa9.73□□□□□ -0.85
MCF2L-204ENST00000375608 IGKV2D-28P01615 120 aa9.73□□□□□ -0.85
MCF2L-204ENST00000375608 HELZ2Q9BYK8 2649 aaKnown RBP9.72□□□□□ -0.85
MCF2L-204ENST00000375608 TRBV6-8A0A0A6YYG3 113 aa9.72□□□□□ -0.85
MCF2L-204ENST00000375608 FAM19A1Q7Z5A9 133 aa9.72□□□□□ -0.85
MCF2L-204ENST00000375608 C6orf99Q4VX62 202 aa9.72□□□□□ -0.85
MCF2L-204ENST00000375608 KRTAP10-9P60411 292 aa9.71□□□□□ -0.85
MCF2L-204ENST00000375608 DEFB121Q5J5C9 76 aa9.71□□□□□ -0.85
MCF2L-204ENST00000375608 F5H768 121 aa9.71□□□□□ -0.86
MCF2L-204ENST00000375608 SERP2Q8N6R1 65 aa9.71□□□□□ -0.86
MCF2L-204ENST00000375608 IBA57-AS1B1ANH7 110 aa9.7□□□□□ -0.86
MCF2L-204ENST00000375608 C16orf74Q96GX8 76 aa9.7□□□□□ -0.86
MCF2L-204ENST00000375608 IGHV4-31P0DP07 118 aa9.7□□□□□ -0.86
MCF2L-204ENST00000375608 LINC00959A0A1B0GUT2 108 aa9.69□□□□□ -0.86
MCF2L-204ENST00000375608 FAM222AQ5U5X8 452 aa9.69□□□□□ -0.86
MCF2L-204ENST00000375608 SMIM9A6NGZ8 99 aa9.68□□□□□ -0.86
MCF2L-204ENST00000375608 UPK3BQ9BT76 320 aa9.67□□□□□ -0.86
MCF2L-204ENST00000375608 HRCT1Q6UXD1 115 aa9.67□□□□□ -0.86
MCF2L-204ENST00000375608 TRAV25A0A0B4J276 109 aa9.67□□□□□ -0.86
MCF2L-204ENST00000375608 SNURFQ9Y675 71 aa9.67□□□□□ -0.86
MCF2L-204ENST00000375608 XAGE1AQ9HD64 81 aa9.66□□□□□ -0.86
MCF2L-204ENST00000375608 VPS13CQ709C8 3753 aa9.66□□□□□ -0.86
MCF2L-204ENST00000375608 APCP25054 2843 aa9.65□□□□□ -0.86
MCF2L-204ENST00000375608 TRBV6-4A0A1B0GX49 114 aa9.65□□□□□ -0.86
MCF2L-204ENST00000375608 BBC3Q96PG8 261 aaPredicted RBP9.65□□□□□ -0.86
MCF2L-204ENST00000375608 SETXQ7Z333 2677 aaKnown RBP9.65□□□□□ -0.86
MCF2L-204ENST00000375608 IGHV3OR16-9A0A0B4J2B5 98 aa9.65□□□□□ -0.86
MCF2L-204ENST00000375608 RBM3P98179 157 aaKnown RBP9.65□□□□□ -0.86
MCF2L-204ENST00000375608 TMEM256-PLSCR3K7ERE1 68 aa9.64□□□□□ -0.87
MCF2L-204ENST00000375608 DNAJC9-AS1A6NH13 148 aa9.64□□□□□ -0.87
MCF2L-204ENST00000375608 JMJD7-PLA2G4BH0Y9G9 81 aa9.64□□□□□ -0.87
MCF2L-204ENST00000375608 Q6JHZ5 121 aa9.64□□□□□ -0.87
MCF2L-204ENST00000375608 UNC79Q9P2D8 2635 aa9.64□□□□□ -0.87
MCF2L-204ENST00000375608 CYSTM1Q9H1C7 97 aa9.64□□□□□ -0.87
MCF2L-204ENST00000375608 ATRQ13535 2644 aa9.63□□□□□ -0.87
MCF2L-204ENST00000375608 Q8N3U1 123 aa9.63□□□□□ -0.87
MCF2L-204ENST00000375608 A0A087WZ39 114 aa9.63□□□□□ -0.87
MCF2L-204ENST00000375608 C1orf43Q9BWL3 253 aa9.63□□□□□ -0.87
MCF2L-204ENST00000375608 DEFB135Q30KP9 77 aa9.62□□□□□ -0.87
MCF2L-204ENST00000375608 LINC00482Q8N8I6 264 aa9.62□□□□□ -0.87
MCF2L-204ENST00000375608 CHCHD10Q8WYQ3 142 aaPredicted RBP9.62□□□□□ -0.87
MCF2L-204ENST00000375608 DAD1P61803 113 aa9.62□□□□□ -0.87
MCF2L-204ENST00000375608 KLK12Q9UKR0 248 aa9.61□□□□□ -0.87
MCF2L-204ENST00000375608 CCKP06307 115 aa9.61□□□□□ -0.87
MCF2L-204ENST00000375608 Q6ZQY7 126 aa9.61□□□□□ -0.87
MCF2L-204ENST00000375608 LINC01561Q8N1V8 128 aa9.61□□□□□ -0.87
MCF2L-204ENST00000375608 FHL2Q14192 279 aa9.61□□□□□ -0.87
MCF2L-204ENST00000375608 Q8N814 137 aa9.61□□□□□ -0.87
MCF2L-204ENST00000375608 PKIGQ9Y2B9 76 aa9.61□□□□□ -0.87
MCF2L-204ENST00000375608 DEFB113Q30KQ7 82 aa9.6□□□□□ -0.87
MCF2L-204ENST00000375608 TMEM258P61165 79 aa9.6□□□□□ -0.87
MCF2L-204ENST00000375608 SPAG11BQ08648 103 aa9.6□□□□□ -0.87
MCF2L-204ENST00000375608 C4orf26Q17RF5 130 aa9.6□□□□□ -0.87
MCF2L-204ENST00000375608 C6orf223Q8N319 242 aa9.6□□□□□ -0.87
MCF2L-204ENST00000375608 CRYGAP11844 174 aa9.59□□□□□ -0.87
MCF2L-204ENST00000375608 DEFB105AQ8NG35 78 aa9.59□□□□□ -0.87
MCF2L-204ENST00000375608 UNQ6190/PRO20217Q6UXQ8 127 aa9.59□□□□□ -0.87
MCF2L-204ENST00000375608 REG3AQ06141 175 aa9.58□□□□□ -0.88
MCF2L-204ENST00000375608 C22orf24Q9Y442 160 aa9.58□□□□□ -0.88
MCF2L-204ENST00000375608 LINC01600Q96MT4 127 aa9.58□□□□□ -0.88
MCF2L-204ENST00000375608 CMC4P56277 68 aaPredicted RBP9.57□□□□□ -0.88
MCF2L-204ENST00000375608 IGHV4-28A0A0C4DH34 117 aa9.57□□□□□ -0.88
MCF2L-204ENST00000375608 PRO0255Q9UI72 69 aa9.57□□□□□ -0.88
MCF2L-204ENST00000375608 UBR5O95071 2799 aaPredicted RBP9.57□□□□□ -0.88
MCF2L-204ENST00000375608 DPH3Q96FX2 82 aa9.57□□□□□ -0.88
MCF2L-204ENST00000375608 HIGD2BQ4VC39 106 aa9.56□□□□□ -0.88
MCF2L-204ENST00000375608 LINC01006Q8NI28 216 aa9.56□□□□□ -0.88
MCF2L-204ENST00000375608 PRB2P02812 416 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-204ENST00000375608 C2orf48Q96LS8 159 aa9.55□□□□□ -0.88
MCF2L-204ENST00000375608 ZNF843Q8N446 348 aa9.55□□□□□ -0.88
MCF2L-204ENST00000375608 FAM236DA0A1B0GTK5 79 aa9.55□□□□□ -0.88
MCF2L-204ENST00000375608 FAM236CP0DP71 79 aa9.55□□□□□ -0.88
MCF2L-204ENST00000375608 TEP1Q99973 2627 aaKnown RBP9.54□□□□□ -0.88
MCF2L-204ENST00000375608 ZNF561-AS1K7EIQ3 104 aa9.54□□□□□ -0.88
MCF2L-204ENST00000375608 ITPR2Q14571 2701 aa9.53□□□□□ -0.88
MCF2L-204ENST00000375608 Q8IZM0 81 aa9.52□□□□□ -0.88
MCF2L-204ENST00000375608 RMI2Q96E14 147 aa9.51□□□□□ -0.89
MCF2L-204ENST00000375608 C10orf25Q5T742 122 aa9.51□□□□□ -0.89
MCF2L-204ENST00000375608 CD164L2Q6UWJ8 174 aa9.5□□□□□ -0.89
MCF2L-204ENST00000375608 Q8N9L7 120 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms