RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 DEFB116Q30KQ4 102 aa14.27□□□□□ -0.13
COL15A1-201ENST00000375001 CHCHD7Q9BUK0 85 aa14.27□□□□□ -0.13
COL15A1-201ENST00000375001 RETNLBQ9BQ08 111 aa14.26□□□□□ -0.13
COL15A1-201ENST00000375001 PTPRSQ13332 1948 aa14.26□□□□□ -0.13
COL15A1-201ENST00000375001 X6R8D5 127 aa14.25□□□□□ -0.13
COL15A1-201ENST00000375001 ABCA2Q9BZC7 2435 aa14.25□□□□□ -0.13
COL15A1-201ENST00000375001 Q9UF83 564 aa14.24□□□□□ -0.13
COL15A1-201ENST00000375001 PSMG3-AS1Q96PY0 264 aa14.24□□□□□ -0.13
COL15A1-201ENST00000375001 IGF2RP11717 2491 aa14.23□□□□□ -0.13
COL15A1-201ENST00000375001 MRGPRG-AS1Q2M3A8 158 aa14.23□□□□□ -0.13
COL15A1-201ENST00000375001 C18orf65Q6ZTR6 163 aa14.23□□□□□ -0.13
COL15A1-201ENST00000375001 A0A087WSZ3 146 aa14.22□□□□□ -0.13
COL15A1-201ENST00000375001 EGFEM1PQ0D2K5 195 aa14.22□□□□□ -0.13
COL15A1-201ENST00000375001 IGLV4-60A0A075B6I1 120 aa14.22□□□□□ -0.13
COL15A1-201ENST00000375001 CENPFP49454 3210 aa14.22□□□□□ -0.13
COL15A1-201ENST00000375001 AMELXQ99217 191 aa14.21□□□□□ -0.13
COL15A1-201ENST00000375001 TRAV10A0A0B4J240 114 aa14.21□□□□□ -0.13
COL15A1-201ENST00000375001 EDN2P20800 178 aa14.21□□□□□ -0.14
COL15A1-201ENST00000375001 PRORYQ9H606 182 aa14.21□□□□□ -0.14
COL15A1-201ENST00000375001 A8MTW9 85 aa14.19□□□□□ -0.14
COL15A1-201ENST00000375001 LIMD2Q9BT23 127 aa14.19□□□□□ -0.14
COL15A1-201ENST00000375001 hDV103S1A0JD37 113 aa14.19□□□□□ -0.14
COL15A1-201ENST00000375001 TLN1Q9Y490 2541 aaKnown RBP14.19□□□□□ -0.14
COL15A1-201ENST00000375001 HCG22E2RYF7 251 aa14.19□□□□□ -0.14
COL15A1-201ENST00000375001 M0R2N4 97 aa14.19□□□□□ -0.14
COL15A1-201ENST00000375001 IGLV1-40P01703 118 aa14.18□□□□□ -0.14
COL15A1-201ENST00000375001 REG3GQ6UW15 175 aa14.17□□□□□ -0.14
COL15A1-201ENST00000375001 ZNF702PQ9H963 129 aa14.17□□□□□ -0.14
COL15A1-201ENST00000375001 LRP4O75096 1905 aa14.17□□□□□ -0.14
COL15A1-201ENST00000375001 CDSNQ15517 529 aa14.17□□□□□ -0.14
COL15A1-201ENST00000375001 C6orf223Q8N319 242 aa14.16□□□□□ -0.14
COL15A1-201ENST00000375001 NCOR2Q9Y618 2525 aa14.15□□□□□ -0.14
COL15A1-201ENST00000375001 CIRBP-AS1Q8TBR5 109 aa14.15□□□□□ -0.14
COL15A1-201ENST00000375001 MUC4Q99102 2169 aa14.14□□□□□ -0.15
COL15A1-201ENST00000375001 C1orf64Q8NEQ6 169 aa14.14□□□□□ -0.15
COL15A1-201ENST00000375001 PRO3102Q9H379 93 aa14.14□□□□□ -0.15
COL15A1-201ENST00000375001 CPAMD8Q8IZJ3 1885 aa14.14□□□□□ -0.15
COL15A1-201ENST00000375001 SMCPP49901 116 aaPredicted RBP14.14□□□□□ -0.15
COL15A1-201ENST00000375001 LINC00337Q8N6G1 96 aa14.14□□□□□ -0.15
COL15A1-201ENST00000375001 RPS28P62857 69 aaKnown RBP14.13□□□□□ -0.15
COL15A1-201ENST00000375001 CXCL6P80162 114 aa14.13□□□□□ -0.15
COL15A1-201ENST00000375001 Q9BRP9 147 aa14.13□□□□□ -0.15
COL15A1-201ENST00000375001 GOLGB1Q14789 3259 aaKnown RBP14.12□□□□□ -0.15
COL15A1-201ENST00000375001 SMIM29Q86T20 159 aa14.11□□□□□ -0.15
COL15A1-201ENST00000375001 SBSPONQ8IVN8 264 aa14.11□□□□□ -0.15
COL15A1-201ENST00000375001 COX8CQ7Z4L0 72 aa14.11□□□□□ -0.15
COL15A1-201ENST00000375001 LINC00474Q9P2X8 69 aa14.1□□□□□ -0.15
COL15A1-201ENST00000375001 SPAG11AQ6PDA7 123 aa14.1□□□□□ -0.15
COL15A1-201ENST00000375001 LINC01006Q8NI28 216 aa14.09□□□□□ -0.15
COL15A1-201ENST00000375001 AVPP01185 164 aa14.07□□□□□ -0.16
COL15A1-201ENST00000375001 ODF3L2Q3SX64 289 aa14.07□□□□□ -0.16
COL15A1-201ENST00000375001 ZNF462Q96JM2 2506 aa14.06□□□□□ -0.16
COL15A1-201ENST00000375001 Q6ZSN1 163 aa14.06□□□□□ -0.16
COL15A1-201ENST00000375001 AGRNO00468 2067 aa14.06□□□□□ -0.16
COL15A1-201ENST00000375001 INAFM1C9JVW0 142 aa14.05□□□□□ -0.16
COL15A1-201ENST00000375001 A0A1B0GU69 56 aa14.04□□□□□ -0.16
COL15A1-201ENST00000375001 PRO0461Q9UI25 63 aa14.04□□□□□ -0.16
COL15A1-201ENST00000375001 VPREB1P12018 145 aa14.03□□□□□ -0.16
COL15A1-201ENST00000375001 FHL2Q14192 279 aa14.01□□□□□ -0.17
COL15A1-201ENST00000375001 SPATA3Q8NHX4 192 aa14.01□□□□□ -0.17
COL15A1-201ENST00000375001 Q8N2B8 174 aa14.01□□□□□ -0.17
COL15A1-201ENST00000375001 COL5A1P20908 1838 aaPredicted RBP13.97□□□□□ -0.17
COL15A1-201ENST00000375001 TET2Q6N021 2002 aaPredicted RBP13.96□□□□□ -0.17
COL15A1-201ENST00000375001 PLA2G2AP14555 144 aa13.96□□□□□ -0.18
COL15A1-201ENST00000375001 TLN2Q9Y4G6 2542 aa13.95□□□□□ -0.18
COL15A1-201ENST00000375001 BCE1O60756 84 aa13.95□□□□□ -0.18
COL15A1-201ENST00000375001 IGKV2D-30A0A075B6S6 120 aa13.94□□□□□ -0.18
COL15A1-201ENST00000375001 IGKV2-30P06310 120 aa13.94□□□□□ -0.18
COL15A1-201ENST00000375001 PRLHP81277 87 aa13.94□□□□□ -0.18
COL15A1-201ENST00000375001 KIAA0087Q14695 138 aa13.94□□□□□ -0.18
COL15A1-201ENST00000375001 A0A1W2PPR1 153 aa13.94□□□□□ -0.18
COL15A1-201ENST00000375001 LINC01556Q5JQF7 62 aa13.93□□□□□ -0.18
COL15A1-201ENST00000375001 PIEZO1Q92508 2521 aa13.93□□□□□ -0.18
COL15A1-201ENST00000375001 SETD2Q9BYW2 2564 aaPredicted RBP13.93□□□□□ -0.18
COL15A1-201ENST00000375001 FAM218AQ96MZ4 157 aa13.93□□□□□ -0.18
COL15A1-201ENST00000375001 RAI1Q7Z5J4 1906 aaPredicted RBP13.92□□□□□ -0.18
COL15A1-201ENST00000375001 USP9XQ93008 2570 aaPredicted RBP13.92□□□□□ -0.18
COL15A1-201ENST00000375001 A0A1B0GUV1 79 aa13.92□□□□□ -0.18
COL15A1-201ENST00000375001 ATP11AUNQ6ZP68 121 aa13.92□□□□□ -0.18
COL15A1-201ENST00000375001 EXPH5Q8NEV8 1989 aa13.92□□□□□ -0.18
COL15A1-201ENST00000375001 Q6ZTC4 211 aa13.91□□□□□ -0.18
COL15A1-201ENST00000375001 C8orf87E5RJ46 101 aa13.91□□□□□ -0.18
COL15A1-201ENST00000375001 Q6ZRU5 148 aa13.91□□□□□ -0.18
COL15A1-201ENST00000375001 LY6G6CO95867 125 aa13.9□□□□□ -0.18
COL15A1-201ENST00000375001 IGLV5-39A0A0G2JS06 123 aa13.9□□□□□ -0.18
COL15A1-201ENST00000375001 FSHBP01225 129 aa13.89□□□□□ -0.19
COL15A1-201ENST00000375001 C7orf65Q6ZTY9 151 aa13.89□□□□□ -0.19
COL15A1-201ENST00000375001 C2orf48Q96LS8 159 aa13.89□□□□□ -0.19
COL15A1-201ENST00000375001 TM2D3Q9BRN9 247 aa13.89□□□□□ -0.19
COL15A1-201ENST00000375001 ADAMTS20P59510 1910 aa13.88□□□□□ -0.19
COL15A1-201ENST00000375001 OXLD1Q5BKU9 147 aa13.88□□□□□ -0.19
COL15A1-201ENST00000375001 ACYP2P14621 99 aa13.87□□□□□ -0.19
COL15A1-201ENST00000375001 KIF25-AS1Q9Y6Z4 181 aa13.87□□□□□ -0.19
COL15A1-201ENST00000375001 SMCR5Q8TEV8 140 aa13.86□□□□□ -0.19
COL15A1-201ENST00000375001 LINC01561Q8N1V8 128 aa13.85□□□□□ -0.19
COL15A1-201ENST00000375001 FAM19A4Q96LR4 140 aa13.85□□□□□ -0.19
COL15A1-201ENST00000375001 LINC01546A6NGU7 62 aa13.85□□□□□ -0.19
COL15A1-201ENST00000375001 ABCA12Q86UK0 2595 aa13.84□□□□□ -0.19
COL15A1-201ENST00000375001 CEP295Q9C0D2 2601 aa13.84□□□□□ -0.19
COL15A1-201ENST00000375001 SPINT4Q6UDR6 99 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms