RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 CSNK1G2-AS1Q8NCQ2 148 aa3.34□□□□□ -1.87
USP48-202ENST00000374730 ATP6V0E2Q8NHE4 81 aa3.34□□□□□ -1.87
USP48-202ENST00000374730 OVOL2Q9BRP0 275 aa3.34□□□□□ -1.87
USP48-202ENST00000374730 GTSF1LQ9H1H1 148 aa3.34□□□□□ -1.87
USP48-202ENST00000374730 Q9HAA7 133 aa3.34□□□□□ -1.87
USP48-202ENST00000374730 PRO1854Q9UHT4 67 aa3.34□□□□□ -1.87
USP48-202ENST00000374730 HIVEP1P15822 2718 aa3.34□□□□□ -1.88
USP48-202ENST00000374730 IGHV3-64A0A075B6Q5 118 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 IGHV3OR16-12A0A075B7B8 117 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 TRAV8-3A0A0A6YYJ7 113 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 IGHV3-38A0A0C4DH36 116 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 TRBV6-4A0A1B0GX49 114 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 H7C423 109 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 J3QR89 54 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 NDUFA1O15239 70 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 IGHV3-33P01772 117 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 LINC00694P0DN24 101 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 WFDC2Q14508 124 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 MIAQ16674 131 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
USP48-202ENST00000374730 ADAMTSL4-AS1Q5T5F5 129 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 NTM-AS1Q6ZSK4 140 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 PPDPFQ9H3Y8 114 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 NDUFA12Q9UI09 145 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 HIVEP2P31629 2446 aa3.33□□□□□ -1.88
USP48-202ENST00000374730 NSD1Q96L73 2696 aaPredicted RBP3.33□□□□□ -1.88
USP48-202ENST00000374730 LOC107984156A0A0G2JMH3 177 aa3.32□□□□□ -1.88
USP48-202ENST00000374730 M0QXV9 152 aa3.32□□□□□ -1.88
USP48-202ENST00000374730 TCL1BO95988 128 aa3.32□□□□□ -1.88
USP48-202ENST00000374730 SPINK8P0C7L1 97 aa3.32□□□□□ -1.88
USP48-202ENST00000374730 IFITM1P13164 125 aa3.32□□□□□ -1.88
USP48-202ENST00000374730 RPL13AP40429 203 aaKnown RBP3.32□□□□□ -1.88
USP48-202ENST00000374730 LINC00242Q5T6M2 205 aa3.32□□□□□ -1.88
USP48-202ENST00000374730 MUSTN1Q8IVN3 82 aa3.32□□□□□ -1.88
USP48-202ENST00000374730 ARL17AQ8IVW1 177 aa3.32□□□□□ -1.88
USP48-202ENST00000374730 LINC00612Q8N6U2 182 aa3.32□□□□□ -1.88
USP48-202ENST00000374730 KIR2DL5BQ8NHK3 375 aa3.32□□□□□ -1.88
USP48-202ENST00000374730 LINC01600Q96MT4 127 aa3.32□□□□□ -1.88
USP48-202ENST00000374730 TMEM243Q9BU79 118 aa3.32□□□□□ -1.88
USP48-202ENST00000374730 WFDC10AQ9H1F0 79 aa3.32□□□□□ -1.88
USP48-202ENST00000374730 NOP10Q9NPE3 64 aaKnown RBP3.32□□□□□ -1.88
USP48-202ENST00000374730 CDKN2A-AS1Q9UH64 79 aa3.32□□□□□ -1.88
USP48-202ENST00000374730 ERG28Q9UKR5 140 aa3.32□□□□□ -1.88
USP48-202ENST00000374730 F8P00451 2351 aa3.31□□□□□ -1.88
USP48-202ENST00000374730 TRGV2A0A075B6R0 118 aa3.31□□□□□ -1.88
USP48-202ENST00000374730 TRBV30A0A0K0K1B3 111 aa3.31□□□□□ -1.88
USP48-202ENST00000374730 PSMB2P49721 201 aa3.31□□□□□ -1.88
USP48-202ENST00000374730 INSL3P51460 131 aa3.31□□□□□ -1.88
USP48-202ENST00000374730 ETDBQ3ZM63 59 aa3.31□□□□□ -1.88
USP48-202ENST00000374730 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.31□□□□□ -1.88
USP48-202ENST00000374730 TMEM101Q96IK0 257 aa3.31□□□□□ -1.88
USP48-202ENST00000374730 C2orf48Q96LS8 159 aa3.31□□□□□ -1.88
USP48-202ENST00000374730 CDC42SE2Q9NRR3 84 aa3.31□□□□□ -1.88
USP48-202ENST00000374730 VWFP04275 2813 aa3.31□□□□□ -1.88
USP48-202ENST00000374730 TRGV4A0A0C4DH28 118 aa3.3□□□□□ -1.88
USP48-202ENST00000374730 SMIM9A6NGZ8 99 aa3.3□□□□□ -1.88
USP48-202ENST00000374730 F5H768 121 aa3.3□□□□□ -1.88
USP48-202ENST00000374730 UBE2L6O14933 153 aa3.3□□□□□ -1.88
USP48-202ENST00000374730 LY6G6DO95868 133 aa3.3□□□□□ -1.88
USP48-202ENST00000374730 COX6A2Q02221 97 aa3.3□□□□□ -1.88
USP48-202ENST00000374730 CIRBPQ14011 172 aaKnown RBP3.3□□□□□ -1.88
USP48-202ENST00000374730 KRTAP21-3Q3LHN1 58 aa3.3□□□□□ -1.88
USP48-202ENST00000374730 SH2D6Q7Z4S9 175 aa3.3□□□□□ -1.88
USP48-202ENST00000374730 TEN1Q86WV5 123 aa3.3□□□□□ -1.88
USP48-202ENST00000374730 COPS9Q8WXC6 57 aa3.3□□□□□ -1.88
USP48-202ENST00000374730 ZNF625Q96I27 306 aaPredicted RBP3.3□□□□□ -1.88
USP48-202ENST00000374730 FBN1P35555 2871 aaKnown RBP3.3□□□□□ -1.88
USP48-202ENST00000374730 TRBV6-8A0A0A6YYG3 113 aa3.29□□□□□ -1.88
USP48-202ENST00000374730 LOC100131303A0A0U1RQF7 123 aa3.29□□□□□ -1.88
USP48-202ENST00000374730 SCGB1C2P0DMR2 95 aa3.29□□□□□ -1.88
USP48-202ENST00000374730 DSCR10P59022 87 aa3.29□□□□□ -1.88
USP48-202ENST00000374730 ATXN8Q156A1 80 aa3.29□□□□□ -1.88
USP48-202ENST00000374730 Q1RN00 199 aa3.29□□□□□ -1.88
USP48-202ENST00000374730 C9orf66Q5T8R8 295 aa3.29□□□□□ -1.88
USP48-202ENST00000374730 SFTA2Q6UW10 78 aa3.29□□□□□ -1.88
USP48-202ENST00000374730 MTURNQ8N3F0 131 aa3.29□□□□□ -1.88
USP48-202ENST00000374730 PPDPFLQ8WWR9 84 aa3.29□□□□□ -1.88
USP48-202ENST00000374730 ICOSQ9Y6W8 199 aa3.29□□□□□ -1.88
USP48-202ENST00000374730 ATRQ13535 2644 aa3.28□□□□□ -1.88
USP48-202ENST00000374730 TRAV13-1A0A0B4J241 112 aa3.28□□□□□ -1.88
USP48-202ENST00000374730 LYRM9A8MSI8 78 aa3.28□□□□□ -1.88
USP48-202ENST00000374730 SLC25A20O43772 301 aa3.28□□□□□ -1.88
USP48-202ENST00000374730 SCGB1A1P11684 91 aa3.28□□□□□ -1.88
USP48-202ENST00000374730 LINC00308Q8TCZ7 52 aa3.28□□□□□ -1.88
USP48-202ENST00000374730 SMR3AQ99954 134 aa3.28□□□□□ -1.88
USP48-202ENST00000374730 TENM1Q9UKZ4 2725 aa3.28□□□□□ -1.88
USP48-202ENST00000374730 TRRAPQ9Y4A5 3859 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 IGHV3OR16-9A0A0B4J2B5 98 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 TRBV10-2A0A0K0K1G8 114 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 C9JAW5 83 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 H3BT86 120 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 H7C2G1 150 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 LST1O00453 97 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 COX6CP09669 75 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 XGP55808 180 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 MEIG1Q5JSS6 88 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 FAM222AQ5U5X8 452 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 LINC01561Q8N1V8 128 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 ANKRD29Q8N6D5 301 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms