RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 TMEM243Q9BU79 118 aa12.3□□□□□ -0.44
LDLRAP1-201ENST00000374338 CHCHD7Q9BUK0 85 aa12.3□□□□□ -0.44
LDLRAP1-201ENST00000374338 EPM2AB3EWF7 344 aa12.3□□□□□ -0.44
LDLRAP1-201ENST00000374338 PKIGQ9Y2B9 76 aa12.3□□□□□ -0.44
LDLRAP1-201ENST00000374338 HILS1P60008 231 aa12.29□□□□□ -0.44
LDLRAP1-201ENST00000374338 FLNBO75369 2602 aaKnown RBP12.29□□□□□ -0.44
LDLRAP1-201ENST00000374338 CCL24O00175 119 aa12.29□□□□□ -0.44
LDLRAP1-201ENST00000374338 STHQ8IWL8 128 aa12.29□□□□□ -0.44
LDLRAP1-201ENST00000374338 FAM236DA0A1B0GTK5 79 aa12.28□□□□□ -0.44
LDLRAP1-201ENST00000374338 GHRHP01286 108 aa12.28□□□□□ -0.44
LDLRAP1-201ENST00000374338 FAM236CP0DP71 79 aa12.28□□□□□ -0.44
LDLRAP1-201ENST00000374338 Q6ZTI0 123 aa12.27□□□□□ -0.44
LDLRAP1-201ENST00000374338 C11orf72Q8NBR9 251 aa12.27□□□□□ -0.44
LDLRAP1-201ENST00000374338 OBSCN-AS1Q96MR7 158 aa12.27□□□□□ -0.45
LDLRAP1-201ENST00000374338 RPL28P46779 137 aaKnown RBP12.27□□□□□ -0.45
LDLRAP1-201ENST00000374338 C20orf197Q8N268 126 aa12.27□□□□□ -0.45
LDLRAP1-201ENST00000374338 C1orf158Q8N1D5 194 aa12.26□□□□□ -0.45
LDLRAP1-201ENST00000374338 COPS9Q8WXC6 57 aa12.26□□□□□ -0.45
LDLRAP1-201ENST00000374338 DGAT2L7PQ6IED9 249 aa12.25□□□□□ -0.45
LDLRAP1-201ENST00000374338 TMEM86BQ8N661 226 aa12.25□□□□□ -0.45
LDLRAP1-201ENST00000374338 SERP1Q9Y6X1 66 aa12.25□□□□□ -0.45
LDLRAP1-201ENST00000374338 A0A087WYN8 130 aa12.24□□□□□ -0.45
LDLRAP1-201ENST00000374338 INSP01308 110 aa12.24□□□□□ -0.45
LDLRAP1-201ENST00000374338 NOP10Q9NPE3 64 aaKnown RBP12.24□□□□□ -0.45
LDLRAP1-201ENST00000374338 TRAV23DV6A0A075B6W5 121 aa12.24□□□□□ -0.45
LDLRAP1-201ENST00000374338 IGLV5-45A0A087WSX0 123 aa12.24□□□□□ -0.45
LDLRAP1-201ENST00000374338 XCL1P47992 114 aa12.24□□□□□ -0.45
LDLRAP1-201ENST00000374338 IGKV3OR2-268A0A0C4DH90 116 aa12.23□□□□□ -0.45
LDLRAP1-201ENST00000374338 LOC100131303A0A0U1RQF7 123 aa12.23□□□□□ -0.45
LDLRAP1-201ENST00000374338 WFDC9Q8NEX5 89 aa12.23□□□□□ -0.45
LDLRAP1-201ENST00000374338 LINC01006Q8NI28 216 aa12.23□□□□□ -0.45
LDLRAP1-201ENST00000374338 IGLV5-39A0A0G2JS06 123 aa12.22□□□□□ -0.45
LDLRAP1-201ENST00000374338 NCR3O14931 201 aa12.22□□□□□ -0.45
LDLRAP1-201ENST00000374338 C16orf95Q9H693 158 aa12.22□□□□□ -0.45
LDLRAP1-201ENST00000374338 LINC00242Q5T6M2 205 aa12.21□□□□□ -0.46
LDLRAP1-201ENST00000374338 H7BZZ5 65 aa12.2□□□□□ -0.46
LDLRAP1-201ENST00000374338 FP248Q71RG6 208 aaPredicted RBP12.19□□□□□ -0.46
LDLRAP1-201ENST00000374338 FAM19A1Q7Z5A9 133 aa12.19□□□□□ -0.46
LDLRAP1-201ENST00000374338 OVOL2Q9BRP0 275 aa12.19□□□□□ -0.46
LDLRAP1-201ENST00000374338 TRAV13-2A0A0B4J235 113 aa12.19□□□□□ -0.46
LDLRAP1-201ENST00000374338 SLPIP03973 132 aa12.19□□□□□ -0.46
LDLRAP1-201ENST00000374338 LINC00337Q8N6G1 96 aa12.19□□□□□ -0.46
LDLRAP1-201ENST00000374338 PF4P02776 101 aa12.18□□□□□ -0.46
LDLRAP1-201ENST00000374338 KRTAP1-1Q07627 177 aa12.18□□□□□ -0.46
LDLRAP1-201ENST00000374338 SMIM1B2RUZ4 78 aa12.17□□□□□ -0.46
LDLRAP1-201ENST00000374338 CRPP02741 224 aa12.17□□□□□ -0.46
LDLRAP1-201ENST00000374338 SPATA3Q8NHX4 192 aa12.17□□□□□ -0.46
LDLRAP1-201ENST00000374338 SMIM11BQ8TCY0 68 aa12.16□□□□□ -0.46
LDLRAP1-201ENST00000374338 LYPD5Q6UWN5 251 aa12.16□□□□□ -0.46
LDLRAP1-201ENST00000374338 TEP1Q99973 2627 aaKnown RBP12.15□□□□□ -0.46
LDLRAP1-201ENST00000374338 SEC61GP60059 68 aa12.15□□□□□ -0.46
LDLRAP1-201ENST00000374338 ENHOQ6UWT2 76 aa12.15□□□□□ -0.46
LDLRAP1-201ENST00000374338 IGKV2-28A0A075B6P5 120 aa12.15□□□□□ -0.46
LDLRAP1-201ENST00000374338 SMIM26A0A096LP01 95 aa12.15□□□□□ -0.46
LDLRAP1-201ENST00000374338 IGKV2D-28P01615 120 aa12.15□□□□□ -0.46
LDLRAP1-201ENST00000374338 CCKP06307 115 aa12.15□□□□□ -0.46
LDLRAP1-201ENST00000374338 GIG44P09565 113 aaPredicted RBP12.15□□□□□ -0.46
LDLRAP1-201ENST00000374338 NTM-AS1Q6ZSK4 140 aa12.15□□□□□ -0.46
LDLRAP1-201ENST00000374338 TOMM7Q9P0U1 55 aa12.15□□□□□ -0.46
LDLRAP1-201ENST00000374338 TRGV2A0A075B6R0 118 aa12.14□□□□□ -0.47
LDLRAP1-201ENST00000374338 LECT2O14960 151 aa12.14□□□□□ -0.47
LDLRAP1-201ENST00000374338 HIVEP1P15822 2718 aa12.14□□□□□ -0.47
LDLRAP1-201ENST00000374338 A8MTW9 85 aa12.14□□□□□ -0.47
LDLRAP1-201ENST00000374338 NSD1Q96L73 2696 aaPredicted RBP12.13□□□□□ -0.47
LDLRAP1-201ENST00000374338 MIR7-3HGQ8N6C7 128 aa12.13□□□□□ -0.47
LDLRAP1-201ENST00000374338 SS18Q15532 418 aa12.13□□□□□ -0.47
LDLRAP1-201ENST00000374338 H0YGX0 51 aa12.12□□□□□ -0.47
LDLRAP1-201ENST00000374338 S100A7L2Q5SY68 101 aa12.12□□□□□ -0.47
LDLRAP1-201ENST00000374338 ATP5EP2Q5VTU8 51 aa12.12□□□□□ -0.47
LDLRAP1-201ENST00000374338 A0A096LPF7 62 aa12.11□□□□□ -0.47
LDLRAP1-201ENST00000374338 DEFB130BP0DP73 79 aa12.11□□□□□ -0.47
LDLRAP1-201ENST00000374338 DEFB130AP0DP74 79 aa12.11□□□□□ -0.47
LDLRAP1-201ENST00000374338 DEFB4AO15263 64 aa12.1□□□□□ -0.47
LDLRAP1-201ENST00000374338 V9GYY9 64 aa12.1□□□□□ -0.47
LDLRAP1-201ENST00000374338 SND1-IT1Q9HBX3 110 aa12.1□□□□□ -0.47
LDLRAP1-201ENST00000374338 A0A0U1RQV1 116 aa12.09□□□□□ -0.47
LDLRAP1-201ENST00000374338 LINC00474Q9P2X8 69 aa12.09□□□□□ -0.47
LDLRAP1-201ENST00000374338 KMT2BQ9UMN6 2715 aaPredicted RBP12.09□□□□□ -0.47
LDLRAP1-201ENST00000374338 KRTAP10-3P60369 221 aa12.09□□□□□ -0.47
LDLRAP1-201ENST00000374338 RPL36AP83881 106 aaKnown RBP12.09□□□□□ -0.47
LDLRAP1-201ENST00000374338 RPL36ALQ969Q0 106 aaKnown RBP12.09□□□□□ -0.47
LDLRAP1-201ENST00000374338 C1orf195Q5TG92 126 aa12.08□□□□□ -0.48
LDLRAP1-201ENST00000374338 BRK1Q8WUW1 75 aa12.08□□□□□ -0.48
LDLRAP1-201ENST00000374338 TRAV7A0A075B6U4 112 aa12.07□□□□□ -0.48
LDLRAP1-201ENST00000374338 K7EQD1 137 aa12.07□□□□□ -0.48
LDLRAP1-201ENST00000374338 C11orf68Q9H3H3 251 aaKnown RBP12.07□□□□□ -0.48
LDLRAP1-201ENST00000374338 KLKP1Q107X0 134 aa12.07□□□□□ -0.48
LDLRAP1-201ENST00000374338 PKD1L1Q8TDX9 2849 aa12.07□□□□□ -0.48
LDLRAP1-201ENST00000374338 LINC00482Q8N8I6 264 aa12.07□□□□□ -0.48
LDLRAP1-201ENST00000374338 SNURFQ9Y675 71 aa12.07□□□□□ -0.48
LDLRAP1-201ENST00000374338 ORMDL1Q9P0S3 153 aa12.06□□□□□ -0.48
LDLRAP1-201ENST00000374338 LINC00158P58513 81 aa12.06□□□□□ -0.48
LDLRAP1-201ENST00000374338 TRBV10-3A0A0K0K1G6 114 aa12.05□□□□□ -0.48
LDLRAP1-201ENST00000374338 PLAC8L1A1L4L8 177 aa12.05□□□□□ -0.48
LDLRAP1-201ENST00000374338 RMI2Q96E14 147 aa12.05□□□□□ -0.48
LDLRAP1-201ENST00000374338 TRGV4A0A0C4DH28 118 aa12.05□□□□□ -0.48
LDLRAP1-201ENST00000374338 F8WEM9 126 aa12.04□□□□□ -0.48
LDLRAP1-201ENST00000374338 CLPSL2Q6UWE3 100 aa12.04□□□□□ -0.48
LDLRAP1-201ENST00000374338 C19orf73Q9NVV2 129 aa12.04□□□□□ -0.48
LDLRAP1-201ENST00000374338 FAM19A3Q7Z5A8 133 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms