RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 FAM222AQ5U5X8 452 aa9.29□□□□□ -0.92
A1CF-204ENST00000373997 TMEM243Q9BU79 118 aa9.29□□□□□ -0.92
A1CF-204ENST00000373997 GAGE12JA6NER3 117 aa9.28□□□□□ -0.92
A1CF-204ENST00000373997 TRACP01848 142 aa9.28□□□□□ -0.92
A1CF-204ENST00000373997 ANK2Q01484 3957 aa9.28□□□□□ -0.92
A1CF-204ENST00000373997 GAGE4Q13068 117 aa9.28□□□□□ -0.92
A1CF-204ENST00000373997 MDFIQ99750 246 aa9.28□□□□□ -0.92
A1CF-204ENST00000373997 LOC100131303A0A0U1RQF7 123 aa9.28□□□□□ -0.92
A1CF-204ENST00000373997 UBE2L6O14933 153 aa9.28□□□□□ -0.92
A1CF-204ENST00000373997 RETNQ9HD89 108 aa9.28□□□□□ -0.92
A1CF-204ENST00000373997 LINC00612Q8N6U2 182 aa9.27□□□□□ -0.93
A1CF-204ENST00000373997 Q8NAQ8 132 aa9.27□□□□□ -0.93
A1CF-204ENST00000373997 NOTCH1P46531 2555 aa9.27□□□□□ -0.93
A1CF-204ENST00000373997 A0A0U1RRA0 63 aa9.26□□□□□ -0.93
A1CF-204ENST00000373997 MIFP14174 115 aa9.26□□□□□ -0.93
A1CF-204ENST00000373997 FHL2Q14192 279 aa9.26□□□□□ -0.93
A1CF-204ENST00000373997 LYRM9A8MSI8 78 aa9.26□□□□□ -0.93
A1CF-204ENST00000373997 PRB2P02812 416 aaPredicted RBP9.26□□□□□ -0.93
A1CF-204ENST00000373997 CELA1Q9UNI1 258 aa9.26□□□□□ -0.93
A1CF-204ENST00000373997 DNAH3Q8TD57 4116 aa9.26□□□□□ -0.93
A1CF-204ENST00000373997 TRBV6-4A0A1B0GX49 114 aa9.25□□□□□ -0.93
A1CF-204ENST00000373997 TRAV13-2A0A0B4J235 113 aa9.25□□□□□ -0.93
A1CF-204ENST00000373997 TRBV7-7A0A0K0K1E9 115 aa9.25□□□□□ -0.93
A1CF-204ENST00000373997 C1orf43Q9BWL3 253 aa9.24□□□□□ -0.93
A1CF-204ENST00000373997 DAD1P61803 113 aa9.23□□□□□ -0.93
A1CF-204ENST00000373997 COX7B2Q8TF08 81 aa9.23□□□□□ -0.93
A1CF-204ENST00000373997 RPL28P46779 137 aaKnown RBP9.22□□□□□ -0.93
A1CF-204ENST00000373997 IMUPQ9GZP8 106 aa9.22□□□□□ -0.93
A1CF-204ENST00000373997 CRPP02741 224 aa9.21□□□□□ -0.94
A1CF-204ENST00000373997 BAALC-AS2P0C853 105 aa9.21□□□□□ -0.94
A1CF-204ENST00000373997 NBEAL1Q6ZS30 2694 aa9.21□□□□□ -0.94
A1CF-204ENST00000373997 SPART-AS1P0CW21 52 aa9.2□□□□□ -0.94
A1CF-204ENST00000373997 GYPEP15421 78 aa9.2□□□□□ -0.94
A1CF-204ENST00000373997 B5MCH6 92 aa9.19□□□□□ -0.94
A1CF-204ENST00000373997 INAFM2P0DMQ5 153 aa9.19□□□□□ -0.94
A1CF-204ENST00000373997 HTN3P15516 51 aa9.19□□□□□ -0.94
A1CF-204ENST00000373997 MIR7-3HGQ8N6C7 128 aa9.19□□□□□ -0.94
A1CF-204ENST00000373997 LINC00643Q86TS7 51 aa9.19□□□□□ -0.94
A1CF-204ENST00000373997 SND1-IT1Q9HBX3 110 aa9.19□□□□□ -0.94
A1CF-204ENST00000373997 PRO0255Q9UI72 69 aa9.19□□□□□ -0.94
A1CF-204ENST00000373997 TENM3Q9P273 2699 aa9.18□□□□□ -0.94
A1CF-204ENST00000373997 TRBV6-8A0A0A6YYG3 113 aa9.18□□□□□ -0.94
A1CF-204ENST00000373997 ATP5G1P05496 136 aa9.18□□□□□ -0.94
A1CF-204ENST00000373997 FAM218AQ96MZ4 157 aa9.18□□□□□ -0.94
A1CF-204ENST00000373997 IGHV3OR16-9A0A0B4J2B5 98 aa9.17□□□□□ -0.94
A1CF-204ENST00000373997 IBA57-AS1B1ANH7 110 aa9.17□□□□□ -0.94
A1CF-204ENST00000373997 CCDC179H3BU77 68 aa9.17□□□□□ -0.94
A1CF-204ENST00000373997 K7EIL1 84 aa9.17□□□□□ -0.94
A1CF-204ENST00000373997 PAX4O43316 350 aa9.17□□□□□ -0.94
A1CF-204ENST00000373997 SDIM1Q6ZPB5 146 aa9.17□□□□□ -0.94
A1CF-204ENST00000373997 MGAM2Q2M2H8 2515 aa9.17□□□□□ -0.94
A1CF-204ENST00000373997 A0A096LPF7 62 aa9.17□□□□□ -0.94
A1CF-204ENST00000373997 LINC00337Q8N6G1 96 aa9.17□□□□□ -0.94
A1CF-204ENST00000373997 IGKV2-28A0A075B6P5 120 aa9.16□□□□□ -0.94
A1CF-204ENST00000373997 A0A087WZ39 114 aa9.16□□□□□ -0.94
A1CF-204ENST00000373997 IGKV2D-28P01615 120 aa9.16□□□□□ -0.94
A1CF-204ENST00000373997 TOMM7Q9P0U1 55 aa9.16□□□□□ -0.94
A1CF-204ENST00000373997 SS18L2Q9UHA2 77 aa9.16□□□□□ -0.94
A1CF-204ENST00000373997 C22orf24Q9Y442 160 aa9.16□□□□□ -0.94
A1CF-204ENST00000373997 H0YGX0 51 aa9.16□□□□□ -0.94
A1CF-204ENST00000373997 MALP21145 153 aa9.16□□□□□ -0.94
A1CF-204ENST00000373997 LINC00158P58513 81 aa9.16□□□□□ -0.94
A1CF-204ENST00000373997 IGLV4-60A0A075B6I1 120 aa9.15□□□□□ -0.94
A1CF-204ENST00000373997 MRAPQ8TCY5 172 aa9.15□□□□□ -0.94
A1CF-204ENST00000373997 CHCHD5Q9BSY4 110 aa9.15□□□□□ -0.94
A1CF-204ENST00000373997 CCL18P55774 89 aa9.14□□□□□ -0.95
A1CF-204ENST00000373997 A0A0J9YWU9 116 aa9.13□□□□□ -0.95
A1CF-204ENST00000373997 DNAL4O96015 105 aa9.13□□□□□ -0.95
A1CF-204ENST00000373997 SMIM11BQ8TCY0 68 aa9.13□□□□□ -0.95
A1CF-204ENST00000373997 SMCR5Q8TEV8 140 aa9.13□□□□□ -0.95
A1CF-204ENST00000373997 IGKV3OR2-268A0A0C4DH90 116 aa9.13□□□□□ -0.95
A1CF-204ENST00000373997 KPRPQ5T749 579 aaPredicted RBP9.13□□□□□ -0.95
A1CF-204ENST00000373997 C11orf68Q9H3H3 251 aaKnown RBP9.13□□□□□ -0.95
A1CF-204ENST00000373997 CXCL5P42830 114 aa9.12□□□□□ -0.95
A1CF-204ENST00000373997 Q9HAA7 133 aa9.12□□□□□ -0.95
A1CF-204ENST00000373997 LINC00959A0A1B0GUT2 108 aa9.11□□□□□ -0.95
A1CF-204ENST00000373997 C5orf47Q569G3 176 aa9.11□□□□□ -0.95
A1CF-204ENST00000373997 FAM236AA0A1B0GUQ0 79 aa9.1□□□□□ -0.95
A1CF-204ENST00000373997 FAM236BA0A1B0GV22 79 aa9.1□□□□□ -0.95
A1CF-204ENST00000373997 Q6ZTC4 211 aa9.1□□□□□ -0.95
A1CF-204ENST00000373997 C5orf38Q86SI9 138 aa9.1□□□□□ -0.95
A1CF-204ENST00000373997 LINC01561Q8N1V8 128 aa9.1□□□□□ -0.95
A1CF-204ENST00000373997 GAGE2AQ6NT46 116 aa9.1□□□□□ -0.95
A1CF-204ENST00000373997 A0A087WYN8 130 aa9.09□□□□□ -0.95
A1CF-204ENST00000373997 A0A1B0GUV1 79 aa9.09□□□□□ -0.95
A1CF-204ENST00000373997 ZNF561-AS1K7EIQ3 104 aa9.08□□□□□ -0.96
A1CF-204ENST00000373997 PFN2P35080 140 aa9.08□□□□□ -0.96
A1CF-204ENST00000373997 NANOS2P60321 138 aaKnown RBP9.08□□□□□ -0.96
A1CF-204ENST00000373997 SS18Q15532 418 aa9.08□□□□□ -0.96
A1CF-204ENST00000373997 C6orf226Q5I0X4 101 aa9.08□□□□□ -0.96
A1CF-204ENST00000373997 OBSCN-AS1Q96MR7 158 aa9.08□□□□□ -0.96
A1CF-204ENST00000373997 Q8IZM0 81 aa9.08□□□□□ -0.96
A1CF-204ENST00000373997 TM2D3Q9BRN9 247 aa9.08□□□□□ -0.96
A1CF-204ENST00000373997 C11orf45Q8TAV5 145 aa9.07□□□□□ -0.96
A1CF-204ENST00000373997 TMEM126AQ9H061 195 aa9.06□□□□□ -0.96
A1CF-204ENST00000373997 OR13C6PQ8NH95 151 aa9.05□□□□□ -0.96
A1CF-204ENST00000373997 LECT2O14960 151 aa9.05□□□□□ -0.96
A1CF-204ENST00000373997 KLK5Q9Y337 293 aaPredicted RBP9.05□□□□□ -0.96
A1CF-204ENST00000373997 A0A1B0GX51 115 aa9.04□□□□□ -0.96
A1CF-204ENST00000373997 XCL1P47992 114 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms