RNA–Protein interactions for RNA: ENST00000373891.2

CHPF-202, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 1,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-202ENST00000373891 FABP9Q0Z7S8 132 aa12.12□□□□□ -0.47
CHPF-202ENST00000373891 MRPL18Q9H0U6 180 aaKnown RBP12.12□□□□□ -0.47
CHPF-202ENST00000373891 TLX1NBP0CAT3 122 aa12.11□□□□□ -0.47
CHPF-202ENST00000373891 ALKBH7Q9BT30 221 aaPredicted RBP12.11□□□□□ -0.47
CHPF-202ENST00000373891 IGIPA6NJ69 53 aa12.1□□□□□ -0.47
CHPF-202ENST00000373891 LINC00242Q5T6M2 205 aa12.1□□□□□ -0.47
CHPF-202ENST00000373891 TOMM6Q96B49 74 aa12.1□□□□□ -0.47
CHPF-202ENST00000373891 AMELXQ99217 191 aa12.1□□□□□ -0.47
CHPF-202ENST00000373891 TIMM17AQ99595 171 aa12.1□□□□□ -0.47
CHPF-202ENST00000373891 SEC11AP67812 179 aa12.08□□□□□ -0.48
CHPF-202ENST00000373891 FA2HQ7L5A8 372 aa12.08□□□□□ -0.48
CHPF-202ENST00000373891 SMCO4Q9NRQ5 59 aa12.08□□□□□ -0.48
CHPF-202ENST00000373891 C2orf82Q6UX34 121 aa12.07□□□□□ -0.48
CHPF-202ENST00000373891 ERASQ7Z444 233 aa12.07□□□□□ -0.48
CHPF-202ENST00000373891 KRTAP9-2Q9BYQ4 174 aa12.07□□□□□ -0.48
CHPF-202ENST00000373891 TRAPPC1Q9Y5R8 145 aa12.07□□□□□ -0.48
CHPF-202ENST00000373891 LINC01546A6NGU7 62 aa12.06□□□□□ -0.48
CHPF-202ENST00000373891 TSPAN13O95857 204 aa12.06□□□□□ -0.48
CHPF-202ENST00000373891 RPL13AP40429 203 aaKnown RBP12.06□□□□□ -0.48
CHPF-202ENST00000373891 LINC01561Q8N1V8 128 aa12.06□□□□□ -0.48
CHPF-202ENST00000373891 SCGB3A1Q96QR1 104 aa12.06□□□□□ -0.48
CHPF-202ENST00000373891 KIAA0087Q14695 138 aa12.05□□□□□ -0.48
CHPF-202ENST00000373891 C9orf129Q5T035 196 aaKnown RBP12.05□□□□□ -0.48
CHPF-202ENST00000373891 LINC00173Q6ZV60 143 aa12.05□□□□□ -0.48
CHPF-202ENST00000373891 HERVK_113P63121 156 aa12.04□□□□□ -0.48
CHPF-202ENST00000373891 ZC2HC1BQ5TFG8 222 aa12.03□□□□□ -0.48
CHPF-202ENST00000373891 FAM19A3Q7Z5A8 133 aa12.03□□□□□ -0.48
CHPF-202ENST00000373891 GEMIN7Q9H840 131 aaKnown RBP12.03□□□□□ -0.48
CHPF-202ENST00000373891 A0A0U1RQV1 116 aa12.02□□□□□ -0.49
CHPF-202ENST00000373891 NDUFC2-KCTD14E9PQ53 114 aa12.01□□□□□ -0.49
CHPF-202ENST00000373891 PRSS2P07478 247 aa12.01□□□□□ -0.49
CHPF-202ENST00000373891 PACRGQ96M98 296 aaPredicted RBP12.01□□□□□ -0.49
CHPF-202ENST00000373891 TRBV30A0A0K0K1B3 111 aa12□□□□□ -0.49
CHPF-202ENST00000373891 LINC00469Q8N7U9 141 aa12□□□□□ -0.49
CHPF-202ENST00000373891 ZNF861PO60384 105 aa11.98□□□□□ -0.49
CHPF-202ENST00000373891 RAB5BP61020 215 aa11.98□□□□□ -0.49
CHPF-202ENST00000373891 LINC00614P0C842 121 aa11.97□□□□□ -0.49
CHPF-202ENST00000373891 CKS1BP61024 79 aa11.97□□□□□ -0.49
CHPF-202ENST00000373891 C18orf32Q8TCD1 76 aa11.97□□□□□ -0.49
CHPF-202ENST00000373891 TINCRA0A1B0GVN0 87 aa11.96□□□□□ -0.49
CHPF-202ENST00000373891 PMVKQ15126 192 aa11.96□□□□□ -0.49
CHPF-202ENST00000373891 C6orf226Q5I0X4 101 aa11.96□□□□□ -0.49
CHPF-202ENST00000373891 Q8IZM0 81 aa11.96□□□□□ -0.49
CHPF-202ENST00000373891 TOMM7Q9P0U1 55 aa11.96□□□□□ -0.49
CHPF-202ENST00000373891 CDKN2A-AS1Q9UH64 79 aa11.96□□□□□ -0.49
CHPF-202ENST00000373891 CST9LQ9H4G1 147 aa11.95□□□□□ -0.5
CHPF-202ENST00000373891 XAGE1AQ9HD64 81 aa11.95□□□□□ -0.5
CHPF-202ENST00000373891 C22orf24Q9Y442 160 aa11.95□□□□□ -0.5
CHPF-202ENST00000373891 A0A087X002 238 aa11.94□□□□□ -0.5
CHPF-202ENST00000373891 FAT4Q6V0I7 4981 aa11.93□□□□□ -0.5
CHPF-202ENST00000373891 HBDP02042 147 aa11.93□□□□□ -0.5
CHPF-202ENST00000373891 NUPR1O60356 82 aa11.91□□□□□ -0.5
CHPF-202ENST00000373891 CXCL5P42830 114 aa11.91□□□□□ -0.5
CHPF-202ENST00000373891 YPEL4Q96NS1 127 aa11.91□□□□□ -0.5
CHPF-202ENST00000373891 IGLV5-45A0A087WSX0 123 aa11.9□□□□□ -0.5
CHPF-202ENST00000373891 H3BRM9 83 aa11.9□□□□□ -0.5
CHPF-202ENST00000373891 PDZD11Q5EBL8 140 aa11.9□□□□□ -0.5
CHPF-202ENST00000373891 LCE2AQ5TA79 106 aaPredicted RBP11.9□□□□□ -0.5
CHPF-202ENST00000373891 TYMSOSQ8TAI1 123 aa11.9□□□□□ -0.5
CHPF-202ENST00000373891 ATP5LO75964 103 aa11.89□□□□□ -0.51
CHPF-202ENST00000373891 NDUFA6P56556 154 aa11.89□□□□□ -0.51
CHPF-202ENST00000373891 URB1-AS1Q96HZ7 61 aa11.89□□□□□ -0.51
CHPF-202ENST00000373891 RETNLBQ9BQ08 111 aa11.89□□□□□ -0.51
CHPF-202ENST00000373891 ANAPC11Q9NYG5 84 aa11.89□□□□□ -0.51
CHPF-202ENST00000373891 F8VRH5 84 aa11.88□□□□□ -0.51
CHPF-202ENST00000373891 LBHQ53QV2 105 aaPredicted RBP11.88□□□□□ -0.51
CHPF-202ENST00000373891 CBLN2Q8IUK8 224 aa11.88□□□□□ -0.51
CHPF-202ENST00000373891 A0A096LNJ9 63 aa11.87□□□□□ -0.51
CHPF-202ENST00000373891 SMIM1B2RUZ4 78 aa11.87□□□□□ -0.51
CHPF-202ENST00000373891 CRYGAP11844 174 aa11.87□□□□□ -0.51
CHPF-202ENST00000373891 SLC7A5P1Q8MH63 180 aa11.87□□□□□ -0.51
CHPF-202ENST00000373891 CHCHD1Q96BP2 118 aaKnown RBP11.87□□□□□ -0.51
CHPF-202ENST00000373891 RPL28P46779 137 aaKnown RBP11.86□□□□□ -0.51
CHPF-202ENST00000373891 PMCHL1Q16048 86 aa11.86□□□□□ -0.51
CHPF-202ENST00000373891 COX7B2Q8TF08 81 aa11.86□□□□□ -0.51
CHPF-202ENST00000373891 RPL37AP8A6NKH3 93 aa11.85□□□□□ -0.51
CHPF-202ENST00000373891 BCE1O60756 84 aa11.85□□□□□ -0.51
CHPF-202ENST00000373891 IGLC3P0DOY3 106 aa11.85□□□□□ -0.51
CHPF-202ENST00000373891 MRPL55Q7Z7F7 128 aaKnown RBP11.85□□□□□ -0.51
CHPF-202ENST00000373891 SPINK8P0C7L1 97 aa11.83□□□□□ -0.52
CHPF-202ENST00000373891 GAGE10A6NGK3 116 aa11.82□□□□□ -0.52
CHPF-202ENST00000373891 BAGE3Q86Y29 109 aa11.82□□□□□ -0.52
CHPF-202ENST00000373891 KRTAP13-2Q52LG2 175 aa11.81□□□□□ -0.52
CHPF-202ENST00000373891 LINC00167Q96N53 147 aa11.81□□□□□ -0.52
CHPF-202ENST00000373891 KRTAP9-6A0A140TA67 174 aa11.8□□□□□ -0.52
CHPF-202ENST00000373891 HSBP1O75506 76 aa11.8□□□□□ -0.52
CHPF-202ENST00000373891 TP73-AS1Q9UF72 201 aa11.8□□□□□ -0.52
CHPF-202ENST00000373891 TRGC2P03986 189 aa11.79□□□□□ -0.52
CHPF-202ENST00000373891 IFI27L1Q96BM0 104 aa11.78□□□□□ -0.52
CHPF-202ENST00000373891 ZNF22P17026 224 aaPredicted RBP11.77□□□□□ -0.53
CHPF-202ENST00000373891 TMEM170BQ5T4T1 132 aa11.77□□□□□ -0.53
CHPF-202ENST00000373891 CHTOPQ9Y3Y2 248 aaKnown RBP11.77□□□□□ -0.53
CHPF-202ENST00000373891 IGLV5-39A0A0G2JS06 123 aa11.76□□□□□ -0.53
CHPF-202ENST00000373891 UBE2AP49459 152 aa11.76□□□□□ -0.53
CHPF-202ENST00000373891 SFTA2Q6UW10 78 aa11.76□□□□□ -0.53
CHPF-202ENST00000373891 CDIP1Q9H305 208 aa11.76□□□□□ -0.53
CHPF-202ENST00000373891 TRAV12-1A0A0B4J245 112 aa11.75□□□□□ -0.53
CHPF-202ENST00000373891 LINC00304Q8N9R0 145 aa11.75□□□□□ -0.53
CHPF-202ENST00000373891 MUC17Q685J3 4493 aa11.75□□□□□ -0.53
CHPF-202ENST00000373891 C11orf86A6NJI1 115 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms