RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 ADAMTSL4-AS1Q5T5F5 129 aa14.28□□□□□ -0.12
SYNC-201ENST00000373484 H7C423 109 aa14.27□□□□□ -0.12
SYNC-201ENST00000373484 TRAV8-3A0A0A6YYJ7 113 aa14.27□□□□□ -0.13
SYNC-201ENST00000373484 KMT2CQ8NEZ4 4911 aaKnown RBP14.26□□□□□ -0.13
SYNC-201ENST00000373484 CIRBPQ14011 172 aaKnown RBP14.26□□□□□ -0.13
SYNC-201ENST00000373484 FAM19A3Q7Z5A8 133 aa14.26□□□□□ -0.13
SYNC-201ENST00000373484 TRGV2A0A075B6R0 118 aa14.25□□□□□ -0.13
SYNC-201ENST00000373484 NDUFV3P56181 108 aaKnown RBP14.25□□□□□ -0.13
SYNC-201ENST00000373484 TEX49A0A1B0GTD5 131 aa14.24□□□□□ -0.13
SYNC-201ENST00000373484 APLNQ9ULZ1 77 aa14.23□□□□□ -0.13
SYNC-201ENST00000373484 NACAE9PAV3 2078 aa14.23□□□□□ -0.13
SYNC-201ENST00000373484 IGLV5-39A0A0G2JS06 123 aa14.22□□□□□ -0.13
SYNC-201ENST00000373484 F5H768 121 aa14.22□□□□□ -0.13
SYNC-201ENST00000373484 RS1O15537 224 aa14.22□□□□□ -0.13
SYNC-201ENST00000373484 TTC32Q5I0X7 151 aa14.22□□□□□ -0.13
SYNC-201ENST00000373484 ALMS1Q8TCU4 4167 aa14.22□□□□□ -0.13
SYNC-201ENST00000373484 TRAV4A0A0B4J268 109 aa14.21□□□□□ -0.13
SYNC-201ENST00000373484 ACYP1P07311 99 aa14.21□□□□□ -0.13
SYNC-201ENST00000373484 HERVK_113P63121 156 aa14.21□□□□□ -0.13
SYNC-201ENST00000373484 CSDC2Q9Y534 153 aaKnown RBP14.21□□□□□ -0.13
SYNC-201ENST00000373484 C15orf53Q8NAA6 179 aa14.2□□□□□ -0.14
SYNC-201ENST00000373484 DNAH1Q9P2D7 4330 aa14.19□□□□□ -0.14
SYNC-201ENST00000373484 SACSQ9NZJ4 4579 aa14.19□□□□□ -0.14
SYNC-201ENST00000373484 IGHV3-73A0A0B4J1V6 119 aa14.18□□□□□ -0.14
SYNC-201ENST00000373484 GAGE12JA6NER3 117 aa14.18□□□□□ -0.14
SYNC-201ENST00000373484 GAGE4Q13068 117 aa14.18□□□□□ -0.14
SYNC-201ENST00000373484 Q6ZSN1 163 aa14.18□□□□□ -0.14
SYNC-201ENST00000373484 TMEM101Q96IK0 257 aa14.18□□□□□ -0.14
SYNC-201ENST00000373484 CDKN2A-AS1Q9UH64 79 aa14.18□□□□□ -0.14
SYNC-201ENST00000373484 LCE6AA0A183 80 aa14.17□□□□□ -0.14
SYNC-201ENST00000373484 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.16□□□□□ -0.14
SYNC-201ENST00000373484 TRBV7-7A0A0K0K1E9 115 aa14.16□□□□□ -0.14
SYNC-201ENST00000373484 IGKV2-29A2NJV5 120 aaPredicted RBP14.16□□□□□ -0.14
SYNC-201ENST00000373484 DGAT2L7PQ6IED9 249 aa14.15□□□□□ -0.14
SYNC-201ENST00000373484 LINC00308Q8TCZ7 52 aa14.15□□□□□ -0.14
SYNC-201ENST00000373484 LINC00476Q8WZB0 136 aa14.15□□□□□ -0.14
SYNC-201ENST00000373484 IMUPQ9GZP8 106 aa14.15□□□□□ -0.14
SYNC-201ENST00000373484 TRBV10-1A0A0K0K1A3 114 aa14.15□□□□□ -0.14
SYNC-201ENST00000373484 COX7A2LO14548 114 aa14.15□□□□□ -0.14
SYNC-201ENST00000373484 HERV-K104P63124 156 aa14.15□□□□□ -0.14
SYNC-201ENST00000373484 FHL2Q14192 279 aa14.15□□□□□ -0.14
SYNC-201ENST00000373484 RNASE13Q5GAN3 156 aaKnown RBP14.14□□□□□ -0.15
SYNC-201ENST00000373484 CLEC2BQ92478 149 aa14.13□□□□□ -0.15
SYNC-201ENST00000373484 H3BNG1 76 aa14.13□□□□□ -0.15
SYNC-201ENST00000373484 TRACP01848 142 aa14.13□□□□□ -0.15
SYNC-201ENST00000373484 VPS13DQ5THJ4 4388 aa14.12□□□□□ -0.15
SYNC-201ENST00000373484 TRGV4A0A0C4DH28 118 aa14.11□□□□□ -0.15
SYNC-201ENST00000373484 LINC00242Q5T6M2 205 aa14.11□□□□□ -0.15
SYNC-201ENST00000373484 PRO0255Q9UI72 69 aa14.11□□□□□ -0.15
SYNC-201ENST00000373484 LY6G6CO95867 125 aa14.11□□□□□ -0.15
SYNC-201ENST00000373484 DAZ4Q86SG3 579 aaKnown RBP14.11□□□□□ -0.15
SYNC-201ENST00000373484 DAZ3Q9NR90 486 aaKnown RBP14.11□□□□□ -0.15
SYNC-201ENST00000373484 Q9UF83 564 aa14.11□□□□□ -0.15
SYNC-201ENST00000373484 Q9H8V8 135 aa14.1□□□□□ -0.15
SYNC-201ENST00000373484 ZNF625Q96I27 306 aaPredicted RBP14.09□□□□□ -0.15
SYNC-201ENST00000373484 HYDINQ4G0P3 5121 aa14.09□□□□□ -0.15
SYNC-201ENST00000373484 PAX4O43316 350 aa14.08□□□□□ -0.15
SYNC-201ENST00000373484 RYR2Q92736 4967 aa14.08□□□□□ -0.16
SYNC-201ENST00000373484 SMIM1B2RUZ4 78 aa14.08□□□□□ -0.16
SYNC-201ENST00000373484 B5MCH6 92 aa14.07□□□□□ -0.16
SYNC-201ENST00000373484 RPL36AP83881 106 aaKnown RBP14.07□□□□□ -0.16
SYNC-201ENST00000373484 RPL36ALQ969Q0 106 aaKnown RBP14.07□□□□□ -0.16
SYNC-201ENST00000373484 NPC2P61916 151 aa14.06□□□□□ -0.16
SYNC-201ENST00000373484 COX6A2Q02221 97 aa14.06□□□□□ -0.16
SYNC-201ENST00000373484 RYR3Q15413 4870 aa14.06□□□□□ -0.16
SYNC-201ENST00000373484 A0A096LPF7 62 aa14.05□□□□□ -0.16
SYNC-201ENST00000373484 IGHV3-38A0A0C4DH36 116 aa14.05□□□□□ -0.16
SYNC-201ENST00000373484 SDIM1Q6ZPB5 146 aa14.05□□□□□ -0.16
SYNC-201ENST00000373484 KMT2AQ03164 3969 aa14.05□□□□□ -0.16
SYNC-201ENST00000373484 K7EQD1 137 aa14.03□□□□□ -0.16
SYNC-201ENST00000373484 LINC00643Q86TS7 51 aa14.03□□□□□ -0.16
SYNC-201ENST00000373484 DAND5Q8N907 189 aa14.03□□□□□ -0.16
SYNC-201ENST00000373484 CDC42SE2Q9NRR3 84 aa14.03□□□□□ -0.16
SYNC-201ENST00000373484 DNAH6Q9C0G6 4158 aa14.02□□□□□ -0.16
SYNC-201ENST00000373484 TRAV13-2A0A0B4J235 113 aa14.02□□□□□ -0.16
SYNC-201ENST00000373484 TRBV6-4A0A1B0GX49 114 aa14.02□□□□□ -0.16
SYNC-201ENST00000373484 SS18L2Q9UHA2 77 aa14.02□□□□□ -0.16
SYNC-201ENST00000373484 CCDC179H3BU77 68 aa14.01□□□□□ -0.17
SYNC-201ENST00000373484 GYPEP15421 78 aa14.01□□□□□ -0.17
SYNC-201ENST00000373484 SOSTDC1Q6X4U4 206 aa14.01□□□□□ -0.17
SYNC-201ENST00000373484 UBE2DNLQ8IWF7 75 aa14.01□□□□□ -0.17
SYNC-201ENST00000373484 INAFM2P0DMQ5 153 aa14□□□□□ -0.17
SYNC-201ENST00000373484 LOC100131303A0A0U1RQF7 123 aa13.99□□□□□ -0.17
SYNC-201ENST00000373484 RPL28P46779 137 aaKnown RBP13.99□□□□□ -0.17
SYNC-201ENST00000373484 CCL18P55774 89 aa13.99□□□□□ -0.17
SYNC-201ENST00000373484 MEIG1Q5JSS6 88 aa13.99□□□□□ -0.17
SYNC-201ENST00000373484 CXCL5P42830 114 aa13.98□□□□□ -0.17
SYNC-201ENST00000373484 ESRGQ1W209 222 aa13.98□□□□□ -0.17
SYNC-201ENST00000373484 LINC00588Q9Y4M8 146 aa13.98□□□□□ -0.17
SYNC-201ENST00000373484 LINC00694P0DN24 101 aa13.97□□□□□ -0.17
SYNC-201ENST00000373484 NTM-AS1Q6ZSK4 140 aa13.97□□□□□ -0.17
SYNC-201ENST00000373484 BAALC-AS2P0C853 105 aa13.97□□□□□ -0.17
SYNC-201ENST00000373484 TMEM126AQ9H061 195 aa13.97□□□□□ -0.17
SYNC-201ENST00000373484 TMEM243Q9BU79 118 aa13.96□□□□□ -0.17
SYNC-201ENST00000373484 TRAV13-1A0A0B4J241 112 aa13.94□□□□□ -0.18
SYNC-201ENST00000373484 LYPD5Q6UWN5 251 aa13.93□□□□□ -0.18
SYNC-201ENST00000373484 UPK3BQ9BT76 320 aa13.92□□□□□ -0.18
SYNC-201ENST00000373484 UBE2L6O14933 153 aa13.92□□□□□ -0.18
SYNC-201ENST00000373484 CRPP02741 224 aa13.92□□□□□ -0.18
SYNC-201ENST00000373484 H0YGX0 51 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms