RNA–Protein interactions for RNA: ENST00000372478.4

C9orf50-201, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C9orf50, Length 1,620 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-201ENST00000372478 CDKN2A-AS1Q9UH64 79 aa16.4■□□□□ 0.22
C9orf50-201ENST00000372478 DLEU1O43261 78 aa16.39■□□□□ 0.21
C9orf50-201ENST00000372478 COX7A2LO14548 114 aa16.38■□□□□ 0.21
C9orf50-201ENST00000372478 C5orf38Q86SI9 138 aa16.38■□□□□ 0.21
C9orf50-201ENST00000372478 BOD1L2Q8IYS8 172 aa16.38■□□□□ 0.21
C9orf50-201ENST00000372478 APOBP04114 4563 aaKnown RBP16.38■□□□□ 0.21
C9orf50-201ENST00000372478 LEPROTO15243 131 aa16.37■□□□□ 0.21
C9orf50-201ENST00000372478 PCP2Q8IVA1 136 aa16.37■□□□□ 0.21
C9orf50-201ENST00000372478 PLEKHB2Q96CS7 222 aa16.37■□□□□ 0.21
C9orf50-201ENST00000372478 IGHV1-58A0A0C4DH39 117 aa16.36■□□□□ 0.21
C9orf50-201ENST00000372478 SLPIP03973 132 aa16.36■□□□□ 0.21
C9orf50-201ENST00000372478 MALP21145 153 aa16.36■□□□□ 0.21
C9orf50-201ENST00000372478 GVQW2A0A096LPI5 108 aaPredicted RBP16.35■□□□□ 0.21
C9orf50-201ENST00000372478 CDK2AP2O75956 126 aa16.35■□□□□ 0.21
C9orf50-201ENST00000372478 RYR1P21817 5038 aa16.34■□□□□ 0.21
C9orf50-201ENST00000372478 LGALS3P17931 250 aaKnown RBP16.34■□□□□ 0.21
C9orf50-201ENST00000372478 HNRNPA3P51991 378 aaKnown RBP16.34■□□□□ 0.21
C9orf50-201ENST00000372478 LINC00526Q96FQ7 95 aa16.34■□□□□ 0.21
C9orf50-201ENST00000372478 IGHV3OR16-9A0A0B4J2B5 98 aa16.33■□□□□ 0.2
C9orf50-201ENST00000372478 J3QQQ9 107 aa16.33■□□□□ 0.2
C9orf50-201ENST00000372478 SPINK8P0C7L1 97 aa16.33■□□□□ 0.2
C9orf50-201ENST00000372478 CNBPP62633 177 aaKnown RBP16.33■□□□□ 0.2
C9orf50-201ENST00000372478 FAM30AQ9NZY2 134 aa16.32■□□□□ 0.2
C9orf50-201ENST00000372478 IGHV3-64A0A075B6Q5 118 aa16.31■□□□□ 0.2
C9orf50-201ENST00000372478 C9orf163Q8N9P6 203 aa16.31■□□□□ 0.2
C9orf50-201ENST00000372478 MYMXA0A1B0GTQ4 84 aa16.3■□□□□ 0.2
C9orf50-201ENST00000372478 HAMPP81172 84 aa16.3■□□□□ 0.2
C9orf50-201ENST00000372478 A0A087WZ39 114 aa16.3■□□□□ 0.2
C9orf50-201ENST00000372478 TTTY13Q9BZ97 58 aa16.3■□□□□ 0.2
C9orf50-201ENST00000372478 HERC2O95714 4834 aa16.3■□□□□ 0.2
C9orf50-201ENST00000372478 DNAH8Q96JB1 4490 aa16.29■□□□□ 0.2
C9orf50-201ENST00000372478 HSPG2P98160 4391 aa16.29■□□□□ 0.2
C9orf50-201ENST00000372478 XGP55808 180 aa16.29■□□□□ 0.2
C9orf50-201ENST00000372478 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.28■□□□□ 0.2
C9orf50-201ENST00000372478 ZNF815PA8K554 130 aa16.28■□□□□ 0.2
C9orf50-201ENST00000372478 LINC01561Q8N1V8 128 aa16.28■□□□□ 0.2
C9orf50-201ENST00000372478 IGLV5-39A0A0G2JS06 123 aa16.27■□□□□ 0.2
C9orf50-201ENST00000372478 SMIM1B2RUZ4 78 aa16.27■□□□□ 0.2
C9orf50-201ENST00000372478 ZNF561-AS1K7EIQ3 104 aa16.27■□□□□ 0.2
C9orf50-201ENST00000372478 APOMO95445 188 aa16.27■□□□□ 0.19
C9orf50-201ENST00000372478 Q6ZSA8 131 aa16.25■□□□□ 0.19
C9orf50-201ENST00000372478 LINC00587B1AMM8 73 aa16.24■□□□□ 0.19
C9orf50-201ENST00000372478 TSPEAR-AS2P59090 65 aa16.24■□□□□ 0.19
C9orf50-201ENST00000372478 CTAG1AP78358 180 aa16.24■□□□□ 0.19
C9orf50-201ENST00000372478 ORAOV1Q8WV07 137 aa16.24■□□□□ 0.19
C9orf50-201ENST00000372478 TP73-AS1Q9UF72 201 aa16.24■□□□□ 0.19
C9orf50-201ENST00000372478 HIGD1BQ9P298 99 aa16.23■□□□□ 0.19
C9orf50-201ENST00000372478 SPAG11BQ08648 103 aa16.23■□□□□ 0.19
C9orf50-201ENST00000372478 SCGB1D4Q6XE38 83 aa16.23■□□□□ 0.19
C9orf50-201ENST00000372478 SDIM1Q6ZPB5 146 aa16.22■□□□□ 0.19
C9orf50-201ENST00000372478 C2orf91Q6ZV80 131 aa16.22■□□□□ 0.19
C9orf50-201ENST00000372478 NDUFA12Q9UI09 145 aa16.21■□□□□ 0.19
C9orf50-201ENST00000372478 SYCNQ0VAF6 134 aa16.2■□□□□ 0.18
C9orf50-201ENST00000372478 CARD19Q96LW7 228 aa16.2■□□□□ 0.18
C9orf50-201ENST00000372478 KRTAP17-1Q9BYP8 105 aa16.2■□□□□ 0.18
C9orf50-201ENST00000372478 COX7B2Q8TF08 81 aa16.19■□□□□ 0.18
C9orf50-201ENST00000372478 CAMK2N2Q96S95 79 aa16.18■□□□□ 0.18
C9orf50-201ENST00000372478 Q6ZRU5 148 aa16.17■□□□□ 0.18
C9orf50-201ENST00000372478 C2orf48Q96LS8 159 aa16.17■□□□□ 0.18
C9orf50-201ENST00000372478 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.17■□□□□ 0.18
C9orf50-201ENST00000372478 PANO1I0J062 215 aa16.16■□□□□ 0.18
C9orf50-201ENST00000372478 NDUFA1O15239 70 aa16.16■□□□□ 0.18
C9orf50-201ENST00000372478 TOMM7Q9P0U1 55 aa16.16■□□□□ 0.18
C9orf50-201ENST00000372478 PRSS2P07478 247 aa16.16■□□□□ 0.18
C9orf50-201ENST00000372478 SCXQ7RTU7 201 aa16.16■□□□□ 0.18
C9orf50-201ENST00000372478 C6orf226Q5I0X4 101 aa16.15■□□□□ 0.18
C9orf50-201ENST00000372478 M0R143 59 aa16.14■□□□□ 0.17
C9orf50-201ENST00000372478 SMR3BP02814 79 aaPredicted RBP16.14■□□□□ 0.17
C9orf50-201ENST00000372478 CHTF8P0CG12 524 aa16.14■□□□□ 0.17
C9orf50-201ENST00000372478 SFTA2Q6UW10 78 aa16.14■□□□□ 0.17
C9orf50-201ENST00000372478 HERV-K104P63124 156 aa16.13■□□□□ 0.17
C9orf50-201ENST00000372478 HSD52Q0P140 79 aa16.13■□□□□ 0.17
C9orf50-201ENST00000372478 KIAA0087Q14695 138 aa16.13■□□□□ 0.17
C9orf50-201ENST00000372478 Q8IZM0 81 aa16.13■□□□□ 0.17
C9orf50-201ENST00000372478 A0A0J9YXY3 114 aa16.12■□□□□ 0.17
C9orf50-201ENST00000372478 TAL2Q16559 108 aa16.12■□□□□ 0.17
C9orf50-201ENST00000372478 CIRBP-AS1Q8TBR5 109 aa16.12■□□□□ 0.17
C9orf50-201ENST00000372478 SRSF9Q13242 221 aaKnown RBP eCLIP16.1■□□□□ 0.17
C9orf50-201ENST00000372478 CIRBPQ14011 172 aaKnown RBP16.1■□□□□ 0.17
C9orf50-201ENST00000372478 C10orf25Q5T742 122 aa16.1■□□□□ 0.17
C9orf50-201ENST00000372478 Q8N1X5 172 aa16.1■□□□□ 0.17
C9orf50-201ENST00000372478 ZNF625Q96I27 306 aaPredicted RBP16.1■□□□□ 0.17
C9orf50-201ENST00000372478 HIST1H4GQ99525 98 aa16.1■□□□□ 0.17
C9orf50-201ENST00000372478 IGKV2-24A0A0C4DH68 120 aa16.09■□□□□ 0.17
C9orf50-201ENST00000372478 UNQ6190/PRO20217Q6UXQ8 127 aa16.09■□□□□ 0.17
C9orf50-201ENST00000372478 TMEM238C9JI98 176 aa16.08■□□□□ 0.17
C9orf50-201ENST00000372478 HINT1P49773 126 aaPredicted RBP16.08■□□□□ 0.17
C9orf50-201ENST00000372478 C2orf82Q6UX34 121 aa16.08■□□□□ 0.17
C9orf50-201ENST00000372478 A0A096LNI7 61 aa16.08■□□□□ 0.16
C9orf50-201ENST00000372478 CKS1BP61024 79 aa16.08■□□□□ 0.16
C9orf50-201ENST00000372478 SPANXB1Q9NS25 103 aaPredicted RBP16.08■□□□□ 0.16
C9orf50-201ENST00000372478 F8WDY8 70 aa16.07■□□□□ 0.16
C9orf50-201ENST00000372478 CXCL5P42830 114 aa16.07■□□□□ 0.16
C9orf50-201ENST00000372478 DPH3Q96FX2 82 aa16.07■□□□□ 0.16
C9orf50-201ENST00000372478 KRTAP4-5Q9BYR2 181 aa16.07■□□□□ 0.16
C9orf50-201ENST00000372478 TIMM17BO60830 172 aa16.06■□□□□ 0.16
C9orf50-201ENST00000372478 SPACA4Q8TDM5 124 aa16.06■□□□□ 0.16
C9orf50-201ENST00000372478 SNHG12Q9BXW3 62 aa16.06■□□□□ 0.16
C9orf50-201ENST00000372478 BATFQ16520 125 aa16.05■□□□□ 0.16
C9orf50-201ENST00000372478 BVES-AS1Q5T3Y7 98 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms