RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 SPART-AS1P0CW21 52 aa13.76□□□□□ -0.21
LHX3-202ENST00000371748 IFITM1P13164 125 aa13.76□□□□□ -0.21
LHX3-202ENST00000371748 PKD1L1Q8TDX9 2849 aa13.76□□□□□ -0.21
LHX3-202ENST00000371748 HTN3P15516 51 aa13.76□□□□□ -0.21
LHX3-202ENST00000371748 ANK2Q01484 3957 aa13.75□□□□□ -0.21
LHX3-202ENST00000371748 PRIMA1Q86XR5 153 aa13.75□□□□□ -0.21
LHX3-202ENST00000371748 SHISA2Q6UWI4 295 aa13.74□□□□□ -0.21
LHX3-202ENST00000371748 A0A0U1RRA0 63 aa13.73□□□□□ -0.21
LHX3-202ENST00000371748 TTC32Q5I0X7 151 aa13.73□□□□□ -0.21
LHX3-202ENST00000371748 DEFB121Q5J5C9 76 aa13.73□□□□□ -0.21
LHX3-202ENST00000371748 RETNQ9HD89 108 aa13.73□□□□□ -0.21
LHX3-202ENST00000371748 BAHCC1Q9P281 2608 aa13.73□□□□□ -0.21
LHX3-202ENST00000371748 B5MCH6 92 aa13.73□□□□□ -0.21
LHX3-202ENST00000371748 SS18L2Q9UHA2 77 aa13.72□□□□□ -0.21
LHX3-202ENST00000371748 MAST4O15021 2626 aa13.72□□□□□ -0.21
LHX3-202ENST00000371748 IGHV3OR16-9A0A0B4J2B5 98 aa13.71□□□□□ -0.21
LHX3-202ENST00000371748 LINC00959A0A1B0GUT2 108 aa13.71□□□□□ -0.21
LHX3-202ENST00000371748 FAM240AA0A1B0GVK7 77 aa13.71□□□□□ -0.21
LHX3-202ENST00000371748 EGFEM1PQ0D2K5 195 aa13.71□□□□□ -0.21
LHX3-202ENST00000371748 CLPSL2Q6UWE3 100 aa13.71□□□□□ -0.21
LHX3-202ENST00000371748 A0A1B0GUV1 79 aa13.71□□□□□ -0.22
LHX3-202ENST00000371748 LINC00308Q8TCZ7 52 aa13.71□□□□□ -0.22
LHX3-202ENST00000371748 CIRBPQ14011 172 aaKnown RBP13.7□□□□□ -0.22
LHX3-202ENST00000371748 C5orf38Q86SI9 138 aa13.69□□□□□ -0.22
LHX3-202ENST00000371748 TOMM7Q9P0U1 55 aa13.69□□□□□ -0.22
LHX3-202ENST00000371748 CCDC179H3BU77 68 aa13.68□□□□□ -0.22
LHX3-202ENST00000371748 MRPL23Q16540 153 aaKnown RBP13.68□□□□□ -0.22
LHX3-202ENST00000371748 MEIG1Q5JSS6 88 aa13.68□□□□□ -0.22
LHX3-202ENST00000371748 Q8N3U1 123 aa13.68□□□□□ -0.22
LHX3-202ENST00000371748 COX7B2Q8TF08 81 aa13.68□□□□□ -0.22
LHX3-202ENST00000371748 XCL1P47992 114 aa13.66□□□□□ -0.22
LHX3-202ENST00000371748 SOSTDC1Q6X4U4 206 aa13.66□□□□□ -0.22
LHX3-202ENST00000371748 A0A087WZ39 114 aa13.66□□□□□ -0.22
LHX3-202ENST00000371748 HERV-K104P63124 156 aa13.65□□□□□ -0.22
LHX3-202ENST00000371748 SS18Q15532 418 aa13.65□□□□□ -0.22
LHX3-202ENST00000371748 COX7A2LO14548 114 aa13.64□□□□□ -0.23
LHX3-202ENST00000371748 LINC00269Q8N2A0 174 aa13.64□□□□□ -0.23
LHX3-202ENST00000371748 DNAH3Q8TD57 4116 aa13.63□□□□□ -0.23
LHX3-202ENST00000371748 ANGP03950 147 aaKnown RBP13.62□□□□□ -0.23
LHX3-202ENST00000371748 COL6A5A8TX70 2615 aa13.61□□□□□ -0.23
LHX3-202ENST00000371748 TRBV7-7A0A0K0K1E9 115 aa13.6□□□□□ -0.23
LHX3-202ENST00000371748 C11orf68Q9H3H3 251 aaKnown RBP13.59□□□□□ -0.23
LHX3-202ENST00000371748 IGLV10-54A0A075B6I4 117 aa13.59□□□□□ -0.23
LHX3-202ENST00000371748 LELP1Q5T871 98 aa13.59□□□□□ -0.23
LHX3-202ENST00000371748 REG3AQ06141 175 aa13.58□□□□□ -0.24
LHX3-202ENST00000371748 COPS9Q8WXC6 57 aa13.58□□□□□ -0.24
LHX3-202ENST00000371748 TENM3Q9P273 2699 aa13.57□□□□□ -0.24
LHX3-202ENST00000371748 Q6ZTC4 211 aa13.57□□□□□ -0.24
LHX3-202ENST00000371748 CHCHD10Q8WYQ3 142 aaPredicted RBP13.56□□□□□ -0.24
LHX3-202ENST00000371748 ACYP1P07311 99 aa13.56□□□□□ -0.24
LHX3-202ENST00000371748 C6orf226Q5I0X4 101 aa13.56□□□□□ -0.24
LHX3-202ENST00000371748 MIR7-3HGQ8N6C7 128 aa13.56□□□□□ -0.24
LHX3-202ENST00000371748 TRACP01848 142 aa13.55□□□□□ -0.24
LHX3-202ENST00000371748 C22orf24Q9Y442 160 aa13.55□□□□□ -0.24
LHX3-202ENST00000371748 NOTCH1P46531 2555 aa13.55□□□□□ -0.24
LHX3-202ENST00000371748 LYPD5Q6UWN5 251 aa13.54□□□□□ -0.24
LHX3-202ENST00000371748 SMCR5Q8TEV8 140 aa13.54□□□□□ -0.24
LHX3-202ENST00000371748 FAM218AQ96MZ4 157 aa13.54□□□□□ -0.24
LHX3-202ENST00000371748 A0A0J9YWU9 116 aa13.54□□□□□ -0.24
LHX3-202ENST00000371748 PRB2P02812 416 aaPredicted RBP13.54□□□□□ -0.24
LHX3-202ENST00000371748 LINC00158P58513 81 aa13.54□□□□□ -0.24
LHX3-202ENST00000371748 CD164L2Q6UWJ8 174 aa13.54□□□□□ -0.24
LHX3-202ENST00000371748 PFN2P35080 140 aa13.52□□□□□ -0.24
LHX3-202ENST00000371748 KPRPQ5T749 579 aaPredicted RBP13.52□□□□□ -0.24
LHX3-202ENST00000371748 BAALC-AS2P0C853 105 aa13.52□□□□□ -0.25
LHX3-202ENST00000371748 PPDPFQ9H3Y8 114 aa13.52□□□□□ -0.25
LHX3-202ENST00000371748 Q8IZM0 81 aa13.51□□□□□ -0.25
LHX3-202ENST00000371748 IMUPQ9GZP8 106 aa13.51□□□□□ -0.25
LHX3-202ENST00000371748 KLK12Q9UKR0 248 aa13.51□□□□□ -0.25
LHX3-202ENST00000371748 IBA57-AS1B1ANH7 110 aa13.5□□□□□ -0.25
LHX3-202ENST00000371748 NANOS2P60321 138 aaKnown RBP13.5□□□□□ -0.25
LHX3-202ENST00000371748 SDIM1Q6ZPB5 146 aa13.5□□□□□ -0.25
LHX3-202ENST00000371748 LINC01561Q8N1V8 128 aa13.5□□□□□ -0.25
LHX3-202ENST00000371748 MALP21145 153 aa13.49□□□□□ -0.25
LHX3-202ENST00000371748 FAM236AA0A1B0GUQ0 79 aa13.47□□□□□ -0.25
LHX3-202ENST00000371748 FAM236BA0A1B0GV22 79 aa13.47□□□□□ -0.25
LHX3-202ENST00000371748 H3BNG1 76 aa13.47□□□□□ -0.25
LHX3-202ENST00000371748 LINC00643Q86TS7 51 aa13.47□□□□□ -0.25
LHX3-202ENST00000371748 CFAP161Q6P656 301 aa13.47□□□□□ -0.25
LHX3-202ENST00000371748 RPL28P46779 137 aaKnown RBP13.46□□□□□ -0.25
LHX3-202ENST00000371748 KIAA0087Q14695 138 aa13.46□□□□□ -0.25
LHX3-202ENST00000371748 LINC00337Q8N6G1 96 aa13.46□□□□□ -0.25
LHX3-202ENST00000371748 CCL18P55774 89 aa13.46□□□□□ -0.25
LHX3-202ENST00000371748 WFDC10BQ8IUB3 73 aa13.46□□□□□ -0.25
LHX3-202ENST00000371748 C11orf45Q8TAV5 145 aa13.46□□□□□ -0.25
LHX3-202ENST00000371748 SND1-IT1Q9HBX3 110 aa13.46□□□□□ -0.25
LHX3-202ENST00000371748 IGKV2-28A0A075B6P5 120 aa13.45□□□□□ -0.26
LHX3-202ENST00000371748 TRAV13-2A0A0B4J235 113 aa13.45□□□□□ -0.26
LHX3-202ENST00000371748 IGKV2D-28P01615 120 aa13.45□□□□□ -0.26
LHX3-202ENST00000371748 ENHOQ6UWT2 76 aa13.45□□□□□ -0.26
LHX3-202ENST00000371748 Q9HAA7 133 aa13.45□□□□□ -0.26
LHX3-202ENST00000371748 PRR34Q9NV39 138 aa13.45□□□□□ -0.26
LHX3-202ENST00000371748 NBEAL1Q6ZS30 2694 aa13.44□□□□□ -0.26
LHX3-202ENST00000371748 DEFB131BA0A096LNP1 70 aa13.44□□□□□ -0.26
LHX3-202ENST00000371748 CRPP02741 224 aa13.43□□□□□ -0.26
LHX3-202ENST00000371748 INAFM2P0DMQ5 153 aa13.41□□□□□ -0.26
LHX3-202ENST00000371748 ESRGQ1W209 222 aa13.41□□□□□ -0.26
LHX3-202ENST00000371748 SMIM20Q8N5G0 67 aa13.41□□□□□ -0.26
LHX3-202ENST00000371748 MRAPQ8TCY5 172 aa13.41□□□□□ -0.26
LHX3-202ENST00000371748 K7EIL1 84 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms