RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 NPSP0C0P6 89 aa9.13□□□□□ -0.95
SSR4-204ENST00000370087 Q6ZUT4 128 aa9.13□□□□□ -0.95
SSR4-204ENST00000370087 RPL13AP40429 203 aaKnown RBP9.12□□□□□ -0.95
SSR4-204ENST00000370087 LINC01546A6NGU7 62 aa9.11□□□□□ -0.95
SSR4-204ENST00000370087 C18orf32Q8TCD1 76 aa9.11□□□□□ -0.95
SSR4-204ENST00000370087 TMEM141Q96I45 108 aa9.11□□□□□ -0.95
SSR4-204ENST00000370087 C2orf88Q9BSF0 95 aa9.11□□□□□ -0.95
SSR4-204ENST00000370087 MRPL35Q9NZE8 188 aaKnown RBP9.11□□□□□ -0.95
SSR4-204ENST00000370087 IFITM10A6NMD0 228 aa9.1□□□□□ -0.95
SSR4-204ENST00000370087 LINC00614P0C842 121 aa9.1□□□□□ -0.95
SSR4-204ENST00000370087 TEX43Q6ZNM6 134 aa9.1□□□□□ -0.95
SSR4-204ENST00000370087 TOMM6Q96B49 74 aa9.1□□□□□ -0.95
SSR4-204ENST00000370087 C6orf48Q9UBA6 75 aa9.1□□□□□ -0.95
SSR4-204ENST00000370087 M0QXV9 152 aa9.09□□□□□ -0.95
SSR4-204ENST00000370087 TRGC2P03986 189 aa9.09□□□□□ -0.95
SSR4-204ENST00000370087 GAGE2EQ4V326 116 aa9.09□□□□□ -0.95
SSR4-204ENST00000370087 OR10D4PQ8NGN7 298 aa9.09□□□□□ -0.95
SSR4-204ENST00000370087 ORAOV1Q8WV07 137 aa9.09□□□□□ -0.95
SSR4-204ENST00000370087 SCGB3A1Q96QR1 104 aa9.09□□□□□ -0.95
SSR4-204ENST00000370087 TIMM17AQ99595 171 aa9.09□□□□□ -0.95
SSR4-204ENST00000370087 VCX2Q9H322 139 aa9.09□□□□□ -0.95
SSR4-204ENST00000370087 GAGE2DQ9UEU5 116 aa9.09□□□□□ -0.95
SSR4-204ENST00000370087 IGLV4-3A0A075B6K6 122 aa9.08□□□□□ -0.96
SSR4-204ENST00000370087 TLX1NBP0CAT3 122 aa9.08□□□□□ -0.96
SSR4-204ENST00000370087 UNQ6190/PRO20217Q6UXQ8 127 aa9.08□□□□□ -0.96
SSR4-204ENST00000370087 ERASQ7Z444 233 aa9.08□□□□□ -0.96
SSR4-204ENST00000370087 UBE2BP63146 152 aa9.07□□□□□ -0.96
SSR4-204ENST00000370087 FAM104AQ969W3 186 aa9.07□□□□□ -0.96
SSR4-204ENST00000370087 A0A087X002 238 aa9.06□□□□□ -0.96
SSR4-204ENST00000370087 IGIPA6NJ69 53 aa9.06□□□□□ -0.96
SSR4-204ENST00000370087 NDUFA1O15239 70 aa9.06□□□□□ -0.96
SSR4-204ENST00000370087 BAGE3Q86Y29 109 aa9.06□□□□□ -0.96
SSR4-204ENST00000370087 CHCHD1Q96BP2 118 aaKnown RBP9.06□□□□□ -0.96
SSR4-204ENST00000370087 HBDP02042 147 aa9.05□□□□□ -0.96
SSR4-204ENST00000370087 SEC11AP67812 179 aa9.05□□□□□ -0.96
SSR4-204ENST00000370087 IGHV3OR16-9A0A0B4J2B5 98 aa9.04□□□□□ -0.96
SSR4-204ENST00000370087 C9orf129Q5T035 196 aaKnown RBP9.04□□□□□ -0.96
SSR4-204ENST00000370087 AMELXQ99217 191 aa9.03□□□□□ -0.96
SSR4-204ENST00000370087 RETNLBQ9BQ08 111 aa9.03□□□□□ -0.96
SSR4-204ENST00000370087 TMA7Q9Y2S6 64 aaKnown RBP9.03□□□□□ -0.96
SSR4-204ENST00000370087 F8WDY8 70 aa9.02□□□□□ -0.97
SSR4-204ENST00000370087 ZNF861PO60384 105 aa9.02□□□□□ -0.97
SSR4-204ENST00000370087 HSBP1O75506 76 aa9.02□□□□□ -0.97
SSR4-204ENST00000370087 ATP5LO75964 103 aa9.02□□□□□ -0.97
SSR4-204ENST00000370087 KIAA0087Q14695 138 aa9.01□□□□□ -0.97
SSR4-204ENST00000370087 URB1-AS1Q96HZ7 61 aa9.01□□□□□ -0.97
SSR4-204ENST00000370087 HERVK_113P63121 156 aa9□□□□□ -0.97
SSR4-204ENST00000370087 PMVKQ15126 192 aa9□□□□□ -0.97
SSR4-204ENST00000370087 GEMIN7Q9H840 131 aaKnown RBP9□□□□□ -0.97
SSR4-204ENST00000370087 PMCHL1Q16048 86 aa8.99□□□□□ -0.97
SSR4-204ENST00000370087 LINC00242Q5T6M2 205 aa8.99□□□□□ -0.97
SSR4-204ENST00000370087 C2orf82Q6UX34 121 aa8.99□□□□□ -0.97
SSR4-204ENST00000370087 LINC00173Q6ZV60 143 aa8.99□□□□□ -0.97
SSR4-204ENST00000370087 HIST1H2BKO60814 126 aa8.98□□□□□ -0.97
SSR4-204ENST00000370087 HIST1H2BJP06899 126 aa8.98□□□□□ -0.97
SSR4-204ENST00000370087 HIST1H2BOP23527 126 aa8.98□□□□□ -0.97
SSR4-204ENST00000370087 HIST1H2BBP33778 126 aa8.98□□□□□ -0.97
SSR4-204ENST00000370087 NDUFA6P56556 154 aa8.98□□□□□ -0.97
SSR4-204ENST00000370087 HIST1H2BDP58876 126 aa8.98□□□□□ -0.97
SSR4-204ENST00000370087 HIST1H2BCP62807 126 aa8.98□□□□□ -0.97
SSR4-204ENST00000370087 HIST2H2BEQ16778 126 aa8.98□□□□□ -0.97
SSR4-204ENST00000370087 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.98□□□□□ -0.97
SSR4-204ENST00000370087 FAM19A3Q7Z5A8 133 aa8.98□□□□□ -0.97
SSR4-204ENST00000370087 HIST1H2BHQ93079 126 aa8.98□□□□□ -0.97
SSR4-204ENST00000370087 HIST1H2BNQ99877 126 aa8.98□□□□□ -0.97
SSR4-204ENST00000370087 HIST1H2BMQ99879 126 aa8.98□□□□□ -0.97
SSR4-204ENST00000370087 A0A096LNJ9 63 aa8.97□□□□□ -0.97
SSR4-204ENST00000370087 PDZD11Q5EBL8 140 aa8.97□□□□□ -0.97
SSR4-204ENST00000370087 LINC01561Q8N1V8 128 aa8.97□□□□□ -0.97
SSR4-204ENST00000370087 TYMSOSQ8TAI1 123 aa8.97□□□□□ -0.97
SSR4-204ENST00000370087 PACRGQ96M98 296 aaPredicted RBP8.97□□□□□ -0.97
SSR4-204ENST00000370087 CST9LQ9H4G1 147 aa8.97□□□□□ -0.97
SSR4-204ENST00000370087 ANAPC11Q9NYG5 84 aa8.97□□□□□ -0.97
SSR4-204ENST00000370087 NDUFC2-KCTD14E9PQ53 114 aa8.96□□□□□ -0.98
SSR4-204ENST00000370087 SERF1AO75920 110 aa8.96□□□□□ -0.98
SSR4-204ENST00000370087 KRTAP13-2Q52LG2 175 aa8.96□□□□□ -0.98
SSR4-204ENST00000370087 ZC2HC1BQ5TFG8 222 aa8.96□□□□□ -0.98
SSR4-204ENST00000370087 TINCRA0A1B0GVN0 87 aa8.95□□□□□ -0.98
SSR4-204ENST00000370087 LINC00469Q8N7U9 141 aa8.95□□□□□ -0.98
SSR4-204ENST00000370087 TRBV30A0A0K0K1B3 111 aa8.94□□□□□ -0.98
SSR4-204ENST00000370087 LEPROTL1O95214 131 aa8.94□□□□□ -0.98
SSR4-204ENST00000370087 PRSS2P07478 247 aa8.94□□□□□ -0.98
SSR4-204ENST00000370087 FAM19A2Q8N3H0 131 aa8.94□□□□□ -0.98
SSR4-204ENST00000370087 IFI27L1Q96BM0 104 aa8.94□□□□□ -0.98
SSR4-204ENST00000370087 HSPB8Q9UJY1 196 aa8.94□□□□□ -0.98
SSR4-204ENST00000370087 C22orf24Q9Y442 160 aa8.94□□□□□ -0.98
SSR4-204ENST00000370087 H3BRM9 83 aa8.93□□□□□ -0.98
SSR4-204ENST00000370087 NUPR1O60356 82 aa8.93□□□□□ -0.98
SSR4-204ENST00000370087 CRYGAP11844 174 aa8.93□□□□□ -0.98
SSR4-204ENST00000370087 TPRXLQ17RH7 258 aa8.93□□□□□ -0.98
SSR4-204ENST00000370087 LCE2DQ5TA82 110 aaPredicted RBP8.93□□□□□ -0.98
SSR4-204ENST00000370087 CDIP1Q9H305 208 aa8.93□□□□□ -0.98
SSR4-204ENST00000370087 LINC00310P59036 64 aa8.92□□□□□ -0.98
SSR4-204ENST00000370087 FSIP2Q5CZC0 6907 aa8.92□□□□□ -0.98
SSR4-204ENST00000370087 TRAV12-1A0A0B4J245 112 aa8.91□□□□□ -0.98
SSR4-204ENST00000370087 CRCT1Q9UGL9 99 aa8.91□□□□□ -0.98
SSR4-204ENST00000370087 CDKN2A-AS1Q9UH64 79 aa8.91□□□□□ -0.98
SSR4-204ENST00000370087 S100A6P06703 90 aa8.9□□□□□ -0.98
SSR4-204ENST00000370087 IGLC3P0DOY3 106 aa8.9□□□□□ -0.98
SSR4-204ENST00000370087 XAGE1AQ9HD64 81 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms