RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CENPEQ02224 2701 aa3.74□□□□□ -1.81
SMNDC1-202ENST00000369603 PDE6GP18545 87 aa3.74□□□□□ -1.81
SMNDC1-202ENST00000369603 UBE2BP63146 152 aa3.74□□□□□ -1.81
SMNDC1-202ENST00000369603 COL6A3P12111 3177 aa3.74□□□□□ -1.81
SMNDC1-202ENST00000369603 FAM240AA0A1B0GVK7 77 aa3.74□□□□□ -1.81
SMNDC1-202ENST00000369603 COX7BP24311 80 aa3.74□□□□□ -1.81
SMNDC1-202ENST00000369603 NANOS2P60321 138 aaKnown RBP3.74□□□□□ -1.81
SMNDC1-202ENST00000369603 IMUPQ9GZP8 106 aa3.74□□□□□ -1.81
SMNDC1-202ENST00000369603 ITPR3Q14573 2671 aa3.73□□□□□ -1.81
SMNDC1-202ENST00000369603 HELZ2Q9BYK8 2649 aaKnown RBP3.73□□□□□ -1.81
SMNDC1-202ENST00000369603 hADV29S1A0JD25 119 aa3.73□□□□□ -1.81
SMNDC1-202ENST00000369603 ADAMTSL4-AS1Q5T5F5 129 aa3.73□□□□□ -1.81
SMNDC1-202ENST00000369603 Q6ZTC4 211 aa3.73□□□□□ -1.81
SMNDC1-202ENST00000369603 CFAP46Q8IYW2 2715 aa3.73□□□□□ -1.81
SMNDC1-202ENST00000369603 FLNBO75369 2602 aaKnown RBP3.73□□□□□ -1.81
SMNDC1-202ENST00000369603 RETNQ9HD89 108 aa3.73□□□□□ -1.81
SMNDC1-202ENST00000369603 NBEAQ8NFP9 2946 aa3.73□□□□□ -1.81
SMNDC1-202ENST00000369603 F8WDY8 70 aa3.73□□□□□ -1.81
SMNDC1-202ENST00000369603 H3BNG1 76 aa3.73□□□□□ -1.81
SMNDC1-202ENST00000369603 M0QXV9 152 aa3.73□□□□□ -1.81
SMNDC1-202ENST00000369603 IGHV3OR16-9A0A0B4J2B5 98 aa3.72□□□□□ -1.81
SMNDC1-202ENST00000369603 CYSRT1A8MQ03 144 aa3.72□□□□□ -1.81
SMNDC1-202ENST00000369603 RBM3P98179 157 aaKnown RBP3.72□□□□□ -1.81
SMNDC1-202ENST00000369603 LYPD5Q6UWN5 251 aa3.72□□□□□ -1.81
SMNDC1-202ENST00000369603 CSNK1G2-AS1Q8NCQ2 148 aa3.72□□□□□ -1.81
SMNDC1-202ENST00000369603 IGSF10Q6WRI0 2623 aa3.72□□□□□ -1.81
SMNDC1-202ENST00000369603 SBSPONQ8IVN8 264 aa3.72□□□□□ -1.81
SMNDC1-202ENST00000369603 SPTBN5Q9NRC6 3674 aaKnown RBP3.72□□□□□ -1.81
SMNDC1-202ENST00000369603 CR1P17927 2039 aa3.72□□□□□ -1.81
SMNDC1-202ENST00000369603 EGFEM1PQ0D2K5 195 aa3.72□□□□□ -1.81
SMNDC1-202ENST00000369603 KRTAP24-1Q3LI83 254 aa3.72□□□□□ -1.81
SMNDC1-202ENST00000369603 C19orf73Q9NVV2 129 aa3.72□□□□□ -1.81
SMNDC1-202ENST00000369603 Q9UF83 564 aa3.72□□□□□ -1.81
SMNDC1-202ENST00000369603 FUSP35637 526 aaKnown RBP eCLIP3.71□□□□□ -1.81
SMNDC1-202ENST00000369603 RPL28P46779 137 aaKnown RBP3.71□□□□□ -1.81
SMNDC1-202ENST00000369603 C6orf99Q4VX62 202 aa3.71□□□□□ -1.81
SMNDC1-202ENST00000369603 SMIM11BQ8TCY0 68 aa3.71□□□□□ -1.81
SMNDC1-202ENST00000369603 XAGE1AQ9HD64 81 aa3.71□□□□□ -1.81
SMNDC1-202ENST00000369603 M0R378 163 aa3.71□□□□□ -1.82
SMNDC1-202ENST00000369603 COX7CP15954 63 aa3.71□□□□□ -1.82
SMNDC1-202ENST00000369603 NDUFC2O95298 119 aa3.71□□□□□ -1.82
SMNDC1-202ENST00000369603 CELA1Q9UNI1 258 aa3.71□□□□□ -1.82
SMNDC1-202ENST00000369603 TRAV23DV6A0A075B6W5 121 aa3.71□□□□□ -1.82
SMNDC1-202ENST00000369603 C5orf47Q569G3 176 aa3.71□□□□□ -1.82
SMNDC1-202ENST00000369603 ZNF575Q86XF7 245 aa3.71□□□□□ -1.82
SMNDC1-202ENST00000369603 Q8NAQ8 132 aa3.71□□□□□ -1.82
SMNDC1-202ENST00000369603 SLPIP03973 132 aa3.7□□□□□ -1.82
SMNDC1-202ENST00000369603 UNQ6190/PRO20217Q6UXQ8 127 aa3.7□□□□□ -1.82
SMNDC1-202ENST00000369603 DEFB105AQ8NG35 78 aa3.7□□□□□ -1.82
SMNDC1-202ENST00000369603 PRB2P02812 416 aaPredicted RBP3.7□□□□□ -1.82
SMNDC1-202ENST00000369603 GIG44P09565 113 aaPredicted RBP3.7□□□□□ -1.82
SMNDC1-202ENST00000369603 LINC00526Q96FQ7 95 aa3.7□□□□□ -1.82
SMNDC1-202ENST00000369603 C2orf48Q96LS8 159 aa3.7□□□□□ -1.82
SMNDC1-202ENST00000369603 C20orf197Q8N268 126 aa3.69□□□□□ -1.82
SMNDC1-202ENST00000369603 EYSQ5T1H1 3165 aa3.69□□□□□ -1.82
SMNDC1-202ENST00000369603 USP17L23D6RBM5 183 aa3.69□□□□□ -1.82
SMNDC1-202ENST00000369603 FAM19A3Q7Z5A8 133 aa3.69□□□□□ -1.82
SMNDC1-202ENST00000369603 SERP2Q8N6R1 65 aa3.69□□□□□ -1.82
SMNDC1-202ENST00000369603 TRBV7-7A0A0K0K1E9 115 aa3.69□□□□□ -1.82
SMNDC1-202ENST00000369603 NUPR2A6NF83 97 aa3.69□□□□□ -1.82
SMNDC1-202ENST00000369603 CDK2AP2O75956 126 aa3.69□□□□□ -1.82
SMNDC1-202ENST00000369603 LOC107984640A0A0U1RRK4 108 aa3.68□□□□□ -1.82
SMNDC1-202ENST00000369603 KRTAP10-3P60369 221 aa3.68□□□□□ -1.82
SMNDC1-202ENST00000369603 WFDC10BQ8IUB3 73 aa3.68□□□□□ -1.82
SMNDC1-202ENST00000369603 LINC00612Q8N6U2 182 aa3.68□□□□□ -1.82
SMNDC1-202ENST00000369603 PPDPFQ9H3Y8 114 aa3.68□□□□□ -1.82
SMNDC1-202ENST00000369603 LINC01556Q5JQF7 62 aa3.68□□□□□ -1.82
SMNDC1-202ENST00000369603 PLAC8L1A1L4L8 177 aa3.68□□□□□ -1.82
SMNDC1-202ENST00000369603 UBE2AP49459 152 aa3.68□□□□□ -1.82
SMNDC1-202ENST00000369603 TMEM258P61165 79 aa3.68□□□□□ -1.82
SMNDC1-202ENST00000369603 CELSR3Q9NYQ7 3312 aa3.68□□□□□ -1.82
SMNDC1-202ENST00000369603 IGKV2-24A0A0C4DH68 120 aa3.68□□□□□ -1.82
SMNDC1-202ENST00000369603 ZNF73O43830 326 aaPredicted RBP3.68□□□□□ -1.82
SMNDC1-202ENST00000369603 NHLRC4P0CG21 123 aaPredicted RBP3.68□□□□□ -1.82
SMNDC1-202ENST00000369603 NDUFC2-KCTD14E9PQ53 114 aa3.67□□□□□ -1.82
SMNDC1-202ENST00000369603 ENHOQ6UWT2 76 aa3.67□□□□□ -1.82
SMNDC1-202ENST00000369603 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.67□□□□□ -1.82
SMNDC1-202ENST00000369603 DHRS4-AS1Q9P1J3 65 aa3.67□□□□□ -1.82
SMNDC1-202ENST00000369603 A0A087WVE0 104 aa3.67□□□□□ -1.82
SMNDC1-202ENST00000369603 NREPQ16612 68 aa3.67□□□□□ -1.82
SMNDC1-202ENST00000369603 C9orf116Q5BN46 136 aaPredicted RBP3.67□□□□□ -1.82
SMNDC1-202ENST00000369603 ATP5EP2Q5VTU8 51 aa3.67□□□□□ -1.82
SMNDC1-202ENST00000369603 UPK3BQ9BT76 320 aa3.67□□□□□ -1.82
SMNDC1-202ENST00000369603 SPEGQ15772 3267 aa3.67□□□□□ -1.82
SMNDC1-202ENST00000369603 Q6ZQY7 126 aa3.66□□□□□ -1.82
SMNDC1-202ENST00000369603 Q6JHZ5 121 aa3.66□□□□□ -1.82
SMNDC1-202ENST00000369603 FAM19A5Q7Z5A7 132 aaPredicted RBP3.66□□□□□ -1.82
SMNDC1-202ENST00000369603 B9D2Q9BPU9 175 aa3.66□□□□□ -1.82
SMNDC1-202ENST00000369603 FRYLO94915 3013 aa3.66□□□□□ -1.82
SMNDC1-202ENST00000369603 FAM236DA0A1B0GTK5 79 aa3.66□□□□□ -1.82
SMNDC1-202ENST00000369603 FAM236CP0DP71 79 aa3.66□□□□□ -1.82
SMNDC1-202ENST00000369603 ESRGQ1W209 222 aa3.66□□□□□ -1.82
SMNDC1-202ENST00000369603 LINC00337Q8N6G1 96 aa3.66□□□□□ -1.82
SMNDC1-202ENST00000369603 FRYQ5TBA9 3013 aa3.66□□□□□ -1.82
SMNDC1-202ENST00000369603 Q8N814 137 aa3.66□□□□□ -1.82
SMNDC1-202ENST00000369603 LINC00474Q9P2X8 69 aa3.66□□□□□ -1.82
SMNDC1-202ENST00000369603 DMXL2Q8TDJ6 3036 aa3.65□□□□□ -1.82
SMNDC1-202ENST00000369603 C6orf223Q8N319 242 aa3.65□□□□□ -1.82
SMNDC1-202ENST00000369603 A0A087WYN8 130 aa3.65□□□□□ -1.83
SMNDC1-202ENST00000369603 TRBV10-3A0A0K0K1G6 114 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms