RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 UBL5Q9BZL1 73 aa11.82□□□□□ -0.52
DKC1-201ENST00000369550 TMEM256-PLSCR3K7ERE1 68 aa11.81□□□□□ -0.52
DKC1-201ENST00000369550 Q8N814 137 aa11.81□□□□□ -0.52
DKC1-201ENST00000369550 ZFYVE26Q68DK2 2539 aa11.81□□□□□ -0.52
DKC1-201ENST00000369550 TRGV4A0A0C4DH28 118 aa11.8□□□□□ -0.52
DKC1-201ENST00000369550 C4orf3Q8WVX3 66 aa11.8□□□□□ -0.52
DKC1-201ENST00000369550 NDUFC2-KCTD14E9PQ53 114 aa11.79□□□□□ -0.52
DKC1-201ENST00000369550 PRR3P79522 188 aaKnown RBP11.79□□□□□ -0.52
DKC1-201ENST00000369550 FBN2P35556 2912 aa11.79□□□□□ -0.52
DKC1-201ENST00000369550 MXRA5Q9NR99 2828 aa11.79□□□□□ -0.52
DKC1-201ENST00000369550 Q6YL49 198 aa11.79□□□□□ -0.52
DKC1-201ENST00000369550 TRBV6-8A0A0A6YYG3 113 aa11.78□□□□□ -0.52
DKC1-201ENST00000369550 XCL1P47992 114 aa11.77□□□□□ -0.52
DKC1-201ENST00000369550 ANKRD17O75179 2603 aaKnown RBP11.77□□□□□ -0.53
DKC1-201ENST00000369550 LINC00167Q96N53 147 aa11.77□□□□□ -0.53
DKC1-201ENST00000369550 WNK1Q9H4A3 2382 aa11.77□□□□□ -0.53
DKC1-201ENST00000369550 FAM236DA0A1B0GTK5 79 aa11.76□□□□□ -0.53
DKC1-201ENST00000369550 FAM236CP0DP71 79 aa11.76□□□□□ -0.53
DKC1-201ENST00000369550 CHD6Q8TD26 2715 aa11.76□□□□□ -0.53
DKC1-201ENST00000369550 LINC00959A0A1B0GUT2 108 aa11.75□□□□□ -0.53
DKC1-201ENST00000369550 FAM208BQ5VWN6 2430 aa11.75□□□□□ -0.53
DKC1-201ENST00000369550 KRTAP10-9P60411 292 aa11.74□□□□□ -0.53
DKC1-201ENST00000369550 LYPD5Q6UWN5 251 aa11.74□□□□□ -0.53
DKC1-201ENST00000369550 LRRK2Q5S007 2527 aa11.74□□□□□ -0.53
DKC1-201ENST00000369550 TRBV10-3A0A0K0K1G6 114 aa11.74□□□□□ -0.53
DKC1-201ENST00000369550 IGHV4-31P0DP07 118 aa11.74□□□□□ -0.53
DKC1-201ENST00000369550 NANOS2P60321 138 aaKnown RBP11.74□□□□□ -0.53
DKC1-201ENST00000369550 DEFB113Q30KQ7 82 aa11.74□□□□□ -0.53
DKC1-201ENST00000369550 C16orf74Q96GX8 76 aa11.74□□□□□ -0.53
DKC1-201ENST00000369550 FSHBP01225 129 aa11.73□□□□□ -0.53
DKC1-201ENST00000369550 JMJD1CQ15652 2540 aa11.72□□□□□ -0.53
DKC1-201ENST00000369550 TLN2Q9Y4G6 2542 aa11.72□□□□□ -0.53
DKC1-201ENST00000369550 CLPSL2Q6UWE3 100 aa11.72□□□□□ -0.53
DKC1-201ENST00000369550 Q8IZM0 81 aa11.71□□□□□ -0.53
DKC1-201ENST00000369550 PLAC8L1A1L4L8 177 aa11.71□□□□□ -0.54
DKC1-201ENST00000369550 PLA2G2AP14555 144 aa11.71□□□□□ -0.54
DKC1-201ENST00000369550 A0A1W2PRX2 142 aa11.7□□□□□ -0.54
DKC1-201ENST00000369550 RBM3P98179 157 aaKnown RBP11.7□□□□□ -0.54
DKC1-201ENST00000369550 C6orf99Q4VX62 202 aa11.7□□□□□ -0.54
DKC1-201ENST00000369550 C11orf44Q8N8P7 122 aa11.7□□□□□ -0.54
DKC1-201ENST00000369550 CR1P17927 2039 aa11.69□□□□□ -0.54
DKC1-201ENST00000369550 POLQO75417 2590 aa11.69□□□□□ -0.54
DKC1-201ENST00000369550 RPL35AP18077 110 aaKnown RBP11.69□□□□□ -0.54
DKC1-201ENST00000369550 HAMPP81172 84 aa11.69□□□□□ -0.54
DKC1-201ENST00000369550 LAMTOR3Q9UHA4 124 aa11.69□□□□□ -0.54
DKC1-201ENST00000369550 CENPEQ02224 2701 aa11.68□□□□□ -0.54
DKC1-201ENST00000369550 TRAV7A0A075B6U4 112 aa11.68□□□□□ -0.54
DKC1-201ENST00000369550 H7BZZ5 65 aa11.68□□□□□ -0.54
DKC1-201ENST00000369550 SERP1Q9Y6X1 66 aa11.67□□□□□ -0.54
DKC1-201ENST00000369550 GIG44P09565 113 aaPredicted RBP11.67□□□□□ -0.54
DKC1-201ENST00000369550 Q6ZQT0 140 aa11.67□□□□□ -0.54
DKC1-201ENST00000369550 WFDC10AQ9H1F0 79 aa11.66□□□□□ -0.54
DKC1-201ENST00000369550 LINC01547P58512 204 aaPredicted RBP11.66□□□□□ -0.54
DKC1-201ENST00000369550 SNURFQ9Y675 71 aa11.66□□□□□ -0.54
DKC1-201ENST00000369550 EPG5Q9HCE0 2579 aa11.66□□□□□ -0.54
DKC1-201ENST00000369550 PTPN13Q12923 2485 aa11.65□□□□□ -0.54
DKC1-201ENST00000369550 MRAPQ8TCY5 172 aa11.65□□□□□ -0.55
DKC1-201ENST00000369550 NBPF19A0A087WUL8 3843 aa11.64□□□□□ -0.55
DKC1-201ENST00000369550 ZNF561-AS1K7EIQ3 104 aa11.64□□□□□ -0.55
DKC1-201ENST00000369550 DEFB130BP0DP73 79 aa11.64□□□□□ -0.55
DKC1-201ENST00000369550 DEFB130AP0DP74 79 aa11.64□□□□□ -0.55
DKC1-201ENST00000369550 C9orf116Q5BN46 136 aaPredicted RBP11.64□□□□□ -0.55
DKC1-201ENST00000369550 LINC00575Q6W349 94 aa11.64□□□□□ -0.55
DKC1-201ENST00000369550 KRTAP1-3Q8IUG1 177 aa11.63□□□□□ -0.55
DKC1-201ENST00000369550 AKAP9Q99996 3911 aa11.63□□□□□ -0.55
DKC1-201ENST00000369550 NIPBLQ6KC79 2804 aaeCLIP11.63□□□□□ -0.557e-7■■■■■ 36.4
DKC1-201ENST00000369550 TRAV10A0A0B4J240 114 aa11.63□□□□□ -0.55
DKC1-201ENST00000369550 NAV2Q8IVL1 2488 aa11.62□□□□□ -0.55
DKC1-201ENST00000369550 Q6ZVQ6 151 aa11.62□□□□□ -0.55
DKC1-201ENST00000369550 M0R2N4 97 aa11.62□□□□□ -0.55
DKC1-201ENST00000369550 BCE1O60756 84 aa11.62□□□□□ -0.55
DKC1-201ENST00000369550 COX17Q14061 63 aa11.62□□□□□ -0.55
DKC1-201ENST00000369550 SETXQ7Z333 2677 aaKnown RBP11.62□□□□□ -0.55
DKC1-201ENST00000369550 LOC110117498A0A087WWA1 95 aa11.61□□□□□ -0.55
DKC1-201ENST00000369550 CCL24O00175 119 aa11.61□□□□□ -0.55
DKC1-201ENST00000369550 KLKP1Q107X0 134 aa11.61□□□□□ -0.55
DKC1-201ENST00000369550 LINC00482Q8N8I6 264 aa11.61□□□□□ -0.55
DKC1-201ENST00000369550 RMI2Q96E14 147 aa11.61□□□□□ -0.55
DKC1-201ENST00000369550 ABCA12Q86UK0 2595 aa11.61□□□□□ -0.55
DKC1-201ENST00000369550 GYPEP15421 78 aa11.61□□□□□ -0.55
DKC1-201ENST00000369550 A0A096LPF7 62 aa11.6□□□□□ -0.55
DKC1-201ENST00000369550 LINC00269Q8N2A0 174 aa11.6□□□□□ -0.55
DKC1-201ENST00000369550 SETD2Q9BYW2 2564 aaPredicted RBP11.59□□□□□ -0.55
DKC1-201ENST00000369550 F8WEM9 126 aa11.59□□□□□ -0.55
DKC1-201ENST00000369550 IGLV10-54A0A075B6I4 117 aa11.59□□□□□ -0.55
DKC1-201ENST00000369550 A0A1B0GUV1 79 aa11.59□□□□□ -0.55
DKC1-201ENST00000369550 EPM2AB3EWF7 344 aa11.59□□□□□ -0.55
DKC1-201ENST00000369550 LINC00336Q6ZUF6 198 aa11.59□□□□□ -0.55
DKC1-201ENST00000369550 Q8NDZ9 215 aa11.59□□□□□ -0.55
DKC1-201ENST00000369550 TEX15Q9BXT5 2789 aa11.58□□□□□ -0.55
DKC1-201ENST00000369550 KIAA0087Q14695 138 aa11.58□□□□□ -0.56
DKC1-201ENST00000369550 C6orf223Q8N319 242 aa11.58□□□□□ -0.56
DKC1-201ENST00000369550 APCP25054 2843 aa11.58□□□□□ -0.56
DKC1-201ENST00000369550 Q6ZQY7 126 aa11.57□□□□□ -0.56
DKC1-201ENST00000369550 Q8N3U1 123 aa11.57□□□□□ -0.56
DKC1-201ENST00000369550 PRO0628Q9UI54 55 aa11.57□□□□□ -0.56
DKC1-201ENST00000369550 CSNK1G2-AS1Q8NCQ2 148 aa11.56□□□□□ -0.56
DKC1-201ENST00000369550 CMC4P56277 68 aaPredicted RBP11.56□□□□□ -0.56
DKC1-201ENST00000369550 CD164L2Q6UWJ8 174 aa11.56□□□□□ -0.56
DKC1-201ENST00000369550 CXCL6P80162 114 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms