RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 SPAG11BQ08648 103 aa7.22□□□□□ -1.25
BRCC3-204ENST00000369462 PLEKHB2Q96CS7 222 aa7.22□□□□□ -1.25
BRCC3-204ENST00000369462 LINC00518Q8N0U6 118 aa7.21□□□□□ -1.25
BRCC3-204ENST00000369462 LGALS3P17931 250 aaKnown RBP7.21□□□□□ -1.26
BRCC3-204ENST00000369462 KIAA0087Q14695 138 aa7.21□□□□□ -1.26
BRCC3-204ENST00000369462 PCP2Q8IVA1 136 aa7.21□□□□□ -1.26
BRCC3-204ENST00000369462 Q8IZM0 81 aa7.21□□□□□ -1.26
BRCC3-204ENST00000369462 C14orf144Q96I85 54 aa7.2□□□□□ -1.26
BRCC3-204ENST00000369462 C2orf82Q6UX34 121 aa7.2□□□□□ -1.26
BRCC3-204ENST00000369462 LRCOL1A6NCL2 159 aa7.19□□□□□ -1.26
BRCC3-204ENST00000369462 NDUFA12Q9UI09 145 aa7.19□□□□□ -1.26
BRCC3-204ENST00000369462 GVQW2A0A096LPI5 108 aaPredicted RBP7.19□□□□□ -1.26
BRCC3-204ENST00000369462 CKS1BP61024 79 aa7.19□□□□□ -1.26
BRCC3-204ENST00000369462 RTL8CO15255 209 aa7.19□□□□□ -1.26
BRCC3-204ENST00000369462 ZNF815PA8K554 130 aa7.18□□□□□ -1.26
BRCC3-204ENST00000369462 TP73-AS1Q9UF72 201 aa7.18□□□□□ -1.26
BRCC3-204ENST00000369462 NTN5Q8WTR8 489 aaPredicted RBP7.18□□□□□ -1.26
BRCC3-204ENST00000369462 ZNF625Q96I27 306 aaPredicted RBP7.18□□□□□ -1.26
BRCC3-204ENST00000369462 RYR2Q92736 4967 aa7.17□□□□□ -1.26
BRCC3-204ENST00000369462 COX8AP10176 69 aa7.17□□□□□ -1.26
BRCC3-204ENST00000369462 UNQ6190/PRO20217Q6UXQ8 127 aa7.17□□□□□ -1.26
BRCC3-204ENST00000369462 CAMK2N2Q96S95 79 aa7.17□□□□□ -1.26
BRCC3-204ENST00000369462 A0A087WTM6 91 aa7.17□□□□□ -1.26
BRCC3-204ENST00000369462 C10orf25Q5T742 122 aa7.17□□□□□ -1.26
BRCC3-204ENST00000369462 PRO1933Q9H354 126 aa7.17□□□□□ -1.26
BRCC3-204ENST00000369462 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.16□□□□□ -1.26
BRCC3-204ENST00000369462 MYMXA0A1B0GTQ4 84 aa7.16□□□□□ -1.26
BRCC3-204ENST00000369462 NDUFA1O15239 70 aa7.16□□□□□ -1.26
BRCC3-204ENST00000369462 C14orf177Q52M58 125 aa7.16□□□□□ -1.26
BRCC3-204ENST00000369462 LBHQ53QV2 105 aaPredicted RBP7.16□□□□□ -1.26
BRCC3-204ENST00000369462 FRAS1Q86XX4 4008 aa7.16□□□□□ -1.26
BRCC3-204ENST00000369462 SLPIP03973 132 aa7.16□□□□□ -1.26
BRCC3-204ENST00000369462 CXCL5P42830 114 aa7.16□□□□□ -1.26
BRCC3-204ENST00000369462 C2orf48Q96LS8 159 aa7.16□□□□□ -1.26
BRCC3-204ENST00000369462 DNAH17Q9UFH2 4485 aa7.16□□□□□ -1.26
BRCC3-204ENST00000369462 SLC25A34Q6PIV7 304 aa7.15□□□□□ -1.26
BRCC3-204ENST00000369462 BOD1L2Q8IYS8 172 aa7.15□□□□□ -1.26
BRCC3-204ENST00000369462 SYCNQ0VAF6 134 aa7.15□□□□□ -1.26
BRCC3-204ENST00000369462 Q6ZRU5 148 aa7.15□□□□□ -1.26
BRCC3-204ENST00000369462 SCGB1D4Q6XE38 83 aa7.14□□□□□ -1.27
BRCC3-204ENST00000369462 Q8N814 137 aa7.14□□□□□ -1.27
BRCC3-204ENST00000369462 C9orf116Q5BN46 136 aaPredicted RBP7.14□□□□□ -1.27
BRCC3-204ENST00000369462 SFTA2Q6UW10 78 aa7.14□□□□□ -1.27
BRCC3-204ENST00000369462 HERV-K104P63124 156 aa7.14□□□□□ -1.27
BRCC3-204ENST00000369462 A0A0J9YXY3 114 aa7.13□□□□□ -1.27
BRCC3-204ENST00000369462 A0A0U1RRA0 63 aa7.13□□□□□ -1.27
BRCC3-204ENST00000369462 DLEU1O43261 78 aa7.13□□□□□ -1.27
BRCC3-204ENST00000369462 MEIG1Q5JSS6 88 aa7.13□□□□□ -1.27
BRCC3-204ENST00000369462 CARD19Q96LW7 228 aa7.13□□□□□ -1.27
BRCC3-204ENST00000369462 C6orf48Q9UBA6 75 aa7.13□□□□□ -1.27
BRCC3-204ENST00000369462 F8WDY8 70 aa7.12□□□□□ -1.27
BRCC3-204ENST00000369462 PFN2P35080 140 aa7.12□□□□□ -1.27
BRCC3-204ENST00000369462 UQCR10Q9UDW1 63 aa7.12□□□□□ -1.27
BRCC3-204ENST00000369462 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.12□□□□□ -1.27
BRCC3-204ENST00000369462 FAT2Q9NYQ8 4349 aa7.12□□□□□ -1.27
BRCC3-204ENST00000369462 TRBV30A0A0K0K1B3 111 aa7.11□□□□□ -1.27
BRCC3-204ENST00000369462 TSTD3H0UI37 97 aa7.11□□□□□ -1.27
BRCC3-204ENST00000369462 FUSP35637 526 aaKnown RBP eCLIP7.11□□□□□ -1.27
BRCC3-204ENST00000369462 CNBPP62633 177 aaKnown RBP7.11□□□□□ -1.27
BRCC3-204ENST00000369462 ERG28Q9UKR5 140 aa7.11□□□□□ -1.27
BRCC3-204ENST00000369462 SMIM13P0DJ93 91 aa7.11□□□□□ -1.27
BRCC3-204ENST00000369462 RYR3Q15413 4870 aa7.11□□□□□ -1.27
BRCC3-204ENST00000369462 MIEN1Q9BRT3 115 aa7.1□□□□□ -1.27
BRCC3-204ENST00000369462 LINC00158P58513 81 aa7.1□□□□□ -1.27
BRCC3-204ENST00000369462 CIRBPQ14011 172 aaKnown RBP7.1□□□□□ -1.27
BRCC3-204ENST00000369462 DAND5Q8N907 189 aa7.09□□□□□ -1.27
BRCC3-204ENST00000369462 HECTD4Q9Y4D8 3996 aa7.09□□□□□ -1.27
BRCC3-204ENST00000369462 LINC00587B1AMM8 73 aa7.09□□□□□ -1.27
BRCC3-204ENST00000369462 LINC01620Q4KN68 170 aa7.09□□□□□ -1.27
BRCC3-204ENST00000369462 ADAMTSL4-AS1Q5T5F5 129 aa7.09□□□□□ -1.27
BRCC3-204ENST00000369462 C2orf91Q6ZV80 131 aa7.09□□□□□ -1.27
BRCC3-204ENST00000369462 LINC00336Q6ZUF6 198 aa7.09□□□□□ -1.28
BRCC3-204ENST00000369462 LITAFQ99732 161 aa7.09□□□□□ -1.28
BRCC3-204ENST00000369462 TMEM238C9JI98 176 aa7.08□□□□□ -1.28
BRCC3-204ENST00000369462 COX17Q14061 63 aa7.08□□□□□ -1.28
BRCC3-204ENST00000369462 RNF151Q2KHN1 245 aa7.08□□□□□ -1.28
BRCC3-204ENST00000369462 MIR7-3HGQ8N6C7 128 aa7.08□□□□□ -1.28
BRCC3-204ENST00000369462 C9orf163Q8N9P6 203 aa7.08□□□□□ -1.28
BRCC3-204ENST00000369462 HNRNPA3P51991 378 aaKnown RBP7.07□□□□□ -1.28
BRCC3-204ENST00000369462 KRTAP10-2P60368 255 aa7.07□□□□□ -1.28
BRCC3-204ENST00000369462 NDUFC2-KCTD14E9PQ53 114 aa7.07□□□□□ -1.28
BRCC3-204ENST00000369462 EIF4EBP3O60516 100 aaPredicted RBP7.07□□□□□ -1.28
BRCC3-204ENST00000369462 TIMM17BO60830 172 aa7.07□□□□□ -1.28
BRCC3-204ENST00000369462 SRSF9Q13242 221 aaKnown RBP eCLIP7.07□□□□□ -1.28
BRCC3-204ENST00000369462 HIGD1BQ9P298 99 aa7.07□□□□□ -1.28
BRCC3-204ENST00000369462 DNAH11Q96DT5 4516 aa7.07□□□□□ -1.28
BRCC3-204ENST00000369462 IGLV5-52A0A0A0MRZ9 124 aa7.06□□□□□ -1.28
BRCC3-204ENST00000369462 RPL18AQ02543 176 aaKnown RBP7.06□□□□□ -1.28
BRCC3-204ENST00000369462 Q6ZRP5 223 aa7.06□□□□□ -1.28
BRCC3-204ENST00000369462 NPC2P61916 151 aa7.06□□□□□ -1.28
BRCC3-204ENST00000369462 GAGE2EQ4V326 116 aa7.06□□□□□ -1.28
BRCC3-204ENST00000369462 GAGE2DQ9UEU5 116 aa7.06□□□□□ -1.28
BRCC3-204ENST00000369462 HIST1H4GQ99525 98 aa7.05□□□□□ -1.28
BRCC3-204ENST00000369462 PKD1P98161 4303 aa7.05□□□□□ -1.28
BRCC3-204ENST00000369462 XAGE1AQ9HD64 81 aa7.05□□□□□ -1.28
BRCC3-204ENST00000369462 LOC107984640A0A0U1RRK4 108 aa7.05□□□□□ -1.28
BRCC3-204ENST00000369462 PCP4L1A6NKN8 68 aa7.05□□□□□ -1.28
BRCC3-204ENST00000369462 GAGE2BQ13066 116 aa7.05□□□□□ -1.28
BRCC3-204ENST00000369462 TLX1NBP0CAT3 122 aa7.04□□□□□ -1.28
BRCC3-204ENST00000369462 DDTP30046 118 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms