RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 NUPR1O60356 82 aa9.55□□□□□ -0.88
CKS1B-202ENST00000368436 LINC00469Q8N7U9 141 aa9.55□□□□□ -0.88
CKS1B-202ENST00000368436 ALKBH7Q9BT30 221 aaPredicted RBP9.55□□□□□ -0.88
CKS1B-202ENST00000368436 A6NJY4 79 aa9.54□□□□□ -0.88
CKS1B-202ENST00000368436 HERVK_113P63121 156 aa9.54□□□□□ -0.88
CKS1B-202ENST00000368436 SEC11AP67812 179 aa9.54□□□□□ -0.88
CKS1B-202ENST00000368436 LBHQ53QV2 105 aaPredicted RBP9.54□□□□□ -0.88
CKS1B-202ENST00000368436 NXT2Q9NPJ8 142 aaKnown RBP9.54□□□□□ -0.88
CKS1B-202ENST00000368436 CDKN2A-AS1Q9UH64 79 aa9.54□□□□□ -0.88
CKS1B-202ENST00000368436 PAPPA-AS1Q5QFB9 102 aa9.53□□□□□ -0.88
CKS1B-202ENST00000368436 XAGE1AQ9HD64 81 aa9.53□□□□□ -0.88
CKS1B-202ENST00000368436 F8VRH5 84 aa9.52□□□□□ -0.89
CKS1B-202ENST00000368436 G0S2P27469 103 aa9.52□□□□□ -0.89
CKS1B-202ENST00000368436 TIMM17AQ99595 171 aa9.52□□□□□ -0.89
CKS1B-202ENST00000368436 TP73-AS1Q9UF72 201 aa9.52□□□□□ -0.89
CKS1B-202ENST00000368436 PRR4Q16378 134 aa9.51□□□□□ -0.89
CKS1B-202ENST00000368436 TOMM6Q96B49 74 aa9.51□□□□□ -0.89
CKS1B-202ENST00000368436 CTDSP1Q9GZU7 261 aa9.51□□□□□ -0.89
CKS1B-202ENST00000368436 GEMIN7Q9H840 131 aaKnown RBP9.51□□□□□ -0.89
CKS1B-202ENST00000368436 CXCL5P42830 114 aa9.49□□□□□ -0.89
CKS1B-202ENST00000368436 MRPL55Q7Z7F7 128 aaKnown RBP9.49□□□□□ -0.89
CKS1B-202ENST00000368436 BCE1O60756 84 aa9.48□□□□□ -0.89
CKS1B-202ENST00000368436 SMCPP49901 116 aaPredicted RBP9.48□□□□□ -0.89
CKS1B-202ENST00000368436 ERASQ7Z444 233 aa9.48□□□□□ -0.89
CKS1B-202ENST00000368436 SMIM1B2RUZ4 78 aa9.47□□□□□ -0.89
CKS1B-202ENST00000368436 RPL28P46779 137 aaKnown RBP9.47□□□□□ -0.89
CKS1B-202ENST00000368436 PDZD11Q5EBL8 140 aa9.47□□□□□ -0.89
CKS1B-202ENST00000368436 IGLV5-45A0A087WSX0 123 aa9.46□□□□□ -0.9
CKS1B-202ENST00000368436 KIAA1644Q3SXP7 199 aa9.46□□□□□ -0.9
CKS1B-202ENST00000368436 LINC00167Q96N53 147 aa9.46□□□□□ -0.9
CKS1B-202ENST00000368436 A0A087X002 238 aa9.45□□□□□ -0.9
CKS1B-202ENST00000368436 TINCRA0A1B0GVN0 87 aa9.45□□□□□ -0.9
CKS1B-202ENST00000368436 ADCYAP1P18509 176 aa9.45□□□□□ -0.9
CKS1B-202ENST00000368436 COX7B2Q8TF08 81 aa9.45□□□□□ -0.9
CKS1B-202ENST00000368436 SCGB3A1Q96QR1 104 aa9.45□□□□□ -0.9
CKS1B-202ENST00000368436 LINC01546A6NGU7 62 aa9.44□□□□□ -0.9
CKS1B-202ENST00000368436 RAB14P61106 215 aa9.44□□□□□ -0.9
CKS1B-202ENST00000368436 IGLV5-37A0A075B6J1 123 aa9.43□□□□□ -0.9
CKS1B-202ENST00000368436 LINC01549A6NIU2 74 aa9.43□□□□□ -0.9
CKS1B-202ENST00000368436 RPL37AP8A6NKH3 93 aa9.43□□□□□ -0.9
CKS1B-202ENST00000368436 TSPAN13O95857 204 aa9.43□□□□□ -0.9
CKS1B-202ENST00000368436 TRAV9-1A0A075B6T8 112 aa9.42□□□□□ -0.9
CKS1B-202ENST00000368436 CRYGAP11844 174 aa9.42□□□□□ -0.9
CKS1B-202ENST00000368436 CST9LQ9H4G1 147 aa9.42□□□□□ -0.9
CKS1B-202ENST00000368436 MUC2Q02817 5179 aa9.42□□□□□ -0.9
CKS1B-202ENST00000368436 KRTAP13-1Q8IUC0 172 aa9.41□□□□□ -0.9
CKS1B-202ENST00000368436 TYMSOSQ8TAI1 123 aa9.41□□□□□ -0.9
CKS1B-202ENST00000368436 GAGE10A6NGK3 116 aa9.39□□□□□ -0.91
CKS1B-202ENST00000368436 SPINK8P0C7L1 97 aa9.39□□□□□ -0.91
CKS1B-202ENST00000368436 RAB5BP61020 215 aa9.39□□□□□ -0.91
CKS1B-202ENST00000368436 CLLU1Q5K131 121 aa9.39□□□□□ -0.91
CKS1B-202ENST00000368436 GNB1LQ9BYB4 327 aa9.39□□□□□ -0.91
CKS1B-202ENST00000368436 PMVKQ15126 192 aa9.38□□□□□ -0.91
CKS1B-202ENST00000368436 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
CKS1B-202ENST00000368436 MRPL18Q9H0U6 180 aaKnown RBP9.38□□□□□ -0.91
CKS1B-202ENST00000368436 KRTAP13-2Q52LG2 175 aa9.37□□□□□ -0.91
CKS1B-202ENST00000368436 NKAPP1Q8N9T2 125 aa9.37□□□□□ -0.91
CKS1B-202ENST00000368436 ANAPC11Q9NYG5 84 aa9.37□□□□□ -0.91
CKS1B-202ENST00000368436 TMEM218A2RU14 115 aa9.36□□□□□ -0.91
CKS1B-202ENST00000368436 FAM229BQ4G0N7 80 aa9.36□□□□□ -0.91
CKS1B-202ENST00000368436 ATP5LO75964 103 aa9.35□□□□□ -0.91
CKS1B-202ENST00000368436 UBE2AP49459 152 aa9.35□□□□□ -0.91
CKS1B-202ENST00000368436 UQCC3Q6UW78 93 aa9.35□□□□□ -0.91
CKS1B-202ENST00000368436 IGLV5-39A0A0G2JS06 123 aa9.34□□□□□ -0.91
CKS1B-202ENST00000368436 H3BRM9 83 aa9.34□□□□□ -0.91
CKS1B-202ENST00000368436 A0A0U1RQV1 116 aa9.33□□□□□ -0.92
CKS1B-202ENST00000368436 SCO1O75880 301 aa9.33□□□□□ -0.92
CKS1B-202ENST00000368436 IGLC3P0DOY3 106 aa9.33□□□□□ -0.92
CKS1B-202ENST00000368436 S100PP25815 95 aa9.33□□□□□ -0.92
CKS1B-202ENST00000368436 COX19Q49B96 90 aa9.33□□□□□ -0.92
CKS1B-202ENST00000368436 FA2HQ7L5A8 372 aa9.33□□□□□ -0.92
CKS1B-202ENST00000368436 IGKV2-28A0A075B6P5 120 aa9.32□□□□□ -0.92
CKS1B-202ENST00000368436 IGKV2D-28P01615 120 aa9.32□□□□□ -0.92
CKS1B-202ENST00000368436 SMCO4Q9NRQ5 59 aa9.32□□□□□ -0.92
CKS1B-202ENST00000368436 VPREB1P12018 145 aa9.31□□□□□ -0.92
CKS1B-202ENST00000368436 PFN2P35080 140 aa9.31□□□□□ -0.92
CKS1B-202ENST00000368436 SEC11CQ9BY50 192 aa9.31□□□□□ -0.92
CKS1B-202ENST00000368436 A0A096LNJ9 63 aa9.3□□□□□ -0.92
CKS1B-202ENST00000368436 LINC00304Q8N9R0 145 aa9.3□□□□□ -0.92
CKS1B-202ENST00000368436 SND1-IT1Q9HBX3 110 aa9.3□□□□□ -0.92
CKS1B-202ENST00000368436 ZNF22P17026 224 aaPredicted RBP9.29□□□□□ -0.92
CKS1B-202ENST00000368436 PRLHP81277 87 aa9.29□□□□□ -0.92
CKS1B-202ENST00000368436 FABP9Q0Z7S8 132 aa9.29□□□□□ -0.92
CKS1B-202ENST00000368436 COX17Q14061 63 aa9.29□□□□□ -0.92
CKS1B-202ENST00000368436 TMEM126AQ9H061 195 aa9.29□□□□□ -0.92
CKS1B-202ENST00000368436 ERG28Q9UKR5 140 aa9.29□□□□□ -0.92
CKS1B-202ENST00000368436 IGKV2D-26A0A0A0MRZ7 120 aa9.28□□□□□ -0.92
CKS1B-202ENST00000368436 CTAG1AP78358 180 aa9.28□□□□□ -0.92
CKS1B-202ENST00000368436 RPL24P83731 157 aaKnown RBP9.28□□□□□ -0.92
CKS1B-202ENST00000368436 FAM19A1Q7Z5A9 133 aa9.28□□□□□ -0.92
CKS1B-202ENST00000368436 URB1-AS1Q96HZ7 61 aa9.28□□□□□ -0.92
CKS1B-202ENST00000368436 RETNLBQ9BQ08 111 aa9.28□□□□□ -0.92
CKS1B-202ENST00000368436 TMEM238C9JI98 176 aa9.27□□□□□ -0.93
CKS1B-202ENST00000368436 M0R378 163 aa9.26□□□□□ -0.93
CKS1B-202ENST00000368436 NDUFA6P56556 154 aa9.26□□□□□ -0.93
CKS1B-202ENST00000368436 Q8NDZ9 215 aa9.26□□□□□ -0.93
CKS1B-202ENST00000368436 MUC17Q685J3 4493 aa9.25□□□□□ -0.93
CKS1B-202ENST00000368436 IFITM2Q01629 132 aa9.25□□□□□ -0.93
CKS1B-202ENST00000368436 C10orf91Q5T1B1 145 aa9.25□□□□□ -0.93
CKS1B-202ENST00000368436 PLEKHB2Q96CS7 222 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms