RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 LINC01561Q8N1V8 128 aa6.35□□□□□ -1.39
NUP43-202ENST00000367402 HIST1H2BHQ93079 126 aa6.35□□□□□ -1.39
NUP43-202ENST00000367402 IFI27L1Q96BM0 104 aa6.35□□□□□ -1.39
NUP43-202ENST00000367402 PACRGQ96M98 296 aaPredicted RBP6.35□□□□□ -1.39
NUP43-202ENST00000367402 HIST1H2BNQ99877 126 aa6.35□□□□□ -1.39
NUP43-202ENST00000367402 HIST1H2BMQ99879 126 aa6.35□□□□□ -1.39
NUP43-202ENST00000367402 NUPR1O60356 82 aa6.34□□□□□ -1.39
NUP43-202ENST00000367402 PRSS2P07478 247 aa6.34□□□□□ -1.39
NUP43-202ENST00000367402 Q6ZRU5 148 aa6.34□□□□□ -1.39
NUP43-202ENST00000367402 Q6ZSA8 131 aa6.34□□□□□ -1.39
NUP43-202ENST00000367402 TOMM7Q9P0U1 55 aa6.34□□□□□ -1.39
NUP43-202ENST00000367402 NDUFA1O15239 70 aa6.33□□□□□ -1.4
NUP43-202ENST00000367402 LEPROTL1O95214 131 aa6.33□□□□□ -1.4
NUP43-202ENST00000367402 SMR3BP02814 79 aaPredicted RBP6.33□□□□□ -1.4
NUP43-202ENST00000367402 IGLC3P0DOY3 106 aa6.33□□□□□ -1.4
NUP43-202ENST00000367402 KIAA0087Q14695 138 aa6.33□□□□□ -1.4
NUP43-202ENST00000367402 C6orf226Q5I0X4 101 aa6.33□□□□□ -1.4
NUP43-202ENST00000367402 CHAC1Q9BUX1 264 aa6.33□□□□□ -1.4
NUP43-202ENST00000367402 CHTOPQ9Y3Y2 248 aaKnown RBP6.33□□□□□ -1.4
NUP43-202ENST00000367402 IGLV5-45A0A087WSX0 123 aa6.32□□□□□ -1.4
NUP43-202ENST00000367402 IGKV2-24A0A0C4DH68 120 aa6.32□□□□□ -1.4
NUP43-202ENST00000367402 F8WDY8 70 aa6.32□□□□□ -1.4
NUP43-202ENST00000367402 H0Y8G0 127 aa6.32□□□□□ -1.4
NUP43-202ENST00000367402 H3BRM9 83 aa6.32□□□□□ -1.4
NUP43-202ENST00000367402 PANO1I0J062 215 aa6.32□□□□□ -1.4
NUP43-202ENST00000367402 FABP4P15090 132 aa6.32□□□□□ -1.4
NUP43-202ENST00000367402 CKS1BP61024 79 aa6.32□□□□□ -1.4
NUP43-202ENST00000367402 C10orf25Q5T742 122 aa6.32□□□□□ -1.4
NUP43-202ENST00000367402 KRTAP5-3Q6L8H2 238 aa6.32□□□□□ -1.4
NUP43-202ENST00000367402 C2orf82Q6UX34 121 aa6.32□□□□□ -1.4
NUP43-202ENST00000367402 UNQ6190/PRO20217Q6UXQ8 127 aa6.32□□□□□ -1.4
NUP43-202ENST00000367402 SCXQ7RTU7 201 aa6.32□□□□□ -1.4
NUP43-202ENST00000367402 CIRBP-AS1Q8TBR5 109 aa6.32□□□□□ -1.4
NUP43-202ENST00000367402 HSPB8Q9UJY1 196 aa6.32□□□□□ -1.4
NUP43-202ENST00000367402 PKIGQ9Y2B9 76 aa6.32□□□□□ -1.4
NUP43-202ENST00000367402 RYR1P21817 5038 aa6.31□□□□□ -1.4
NUP43-202ENST00000367402 TRAV12-1A0A0B4J245 112 aa6.31□□□□□ -1.4
NUP43-202ENST00000367402 SPINK8P0C7L1 97 aa6.31□□□□□ -1.4
NUP43-202ENST00000367402 CHTF8P0CG12 524 aa6.31□□□□□ -1.4
NUP43-202ENST00000367402 GAGE2BQ13066 116 aa6.31□□□□□ -1.4
NUP43-202ENST00000367402 Q8IZM0 81 aa6.31□□□□□ -1.4
NUP43-202ENST00000367402 Q8N1X5 172 aa6.31□□□□□ -1.4
NUP43-202ENST00000367402 MRPL35Q9NZE8 188 aaKnown RBP6.31□□□□□ -1.4
NUP43-202ENST00000367402 HERC2O95714 4834 aa6.3□□□□□ -1.4
NUP43-202ENST00000367402 A0A096LNI7 61 aa6.3□□□□□ -1.4
NUP43-202ENST00000367402 LOC107984640A0A0U1RRK4 108 aa6.3□□□□□ -1.4
NUP43-202ENST00000367402 C11orf86A6NJI1 115 aa6.3□□□□□ -1.4
NUP43-202ENST00000367402 SMIM1B2RUZ4 78 aa6.3□□□□□ -1.4
NUP43-202ENST00000367402 ZNF22P17026 224 aaPredicted RBP6.3□□□□□ -1.4
NUP43-202ENST00000367402 RNF151Q2KHN1 245 aa6.3□□□□□ -1.4
NUP43-202ENST00000367402 MAJINQ3KP22 176 aa6.3□□□□□ -1.4
NUP43-202ENST00000367402 TMEM170BQ5T4T1 132 aa6.3□□□□□ -1.4
NUP43-202ENST00000367402 COX7B2Q8TF08 81 aa6.3□□□□□ -1.4
NUP43-202ENST00000367402 C6orf48Q9UBA6 75 aa6.3□□□□□ -1.4
NUP43-202ENST00000367402 F8VRH5 84 aa6.29□□□□□ -1.4
NUP43-202ENST00000367402 RPL18AQ02543 176 aaKnown RBP6.29□□□□□ -1.4
NUP43-202ENST00000367402 CIRBPQ14011 172 aaKnown RBP6.29□□□□□ -1.4
NUP43-202ENST00000367402 SPACA4Q8TDM5 124 aa6.29□□□□□ -1.4
NUP43-202ENST00000367402 LINC00474Q9P2X8 69 aa6.29□□□□□ -1.4
NUP43-202ENST00000367402 APOBP04114 4563 aaKnown RBP6.28□□□□□ -1.4
NUP43-202ENST00000367402 A0A087WYN8 130 aa6.28□□□□□ -1.4
NUP43-202ENST00000367402 TRBV30A0A0K0K1B3 111 aa6.28□□□□□ -1.4
NUP43-202ENST00000367402 PTTG1IPP53801 180 aa6.28□□□□□ -1.4
NUP43-202ENST00000367402 MAP1LC3CQ9BXW4 147 aa6.28□□□□□ -1.4
NUP43-202ENST00000367402 EPM2AB3EWF7 344 aa6.27□□□□□ -1.41
NUP43-202ENST00000367402 CXCL5P42830 114 aa6.27□□□□□ -1.41
NUP43-202ENST00000367402 ODF1Q14990 250 aa6.27□□□□□ -1.41
NUP43-202ENST00000367402 C9orf116Q5BN46 136 aaPredicted RBP6.27□□□□□ -1.41
NUP43-202ENST00000367402 Q5VSD8 79 aa6.27□□□□□ -1.41
NUP43-202ENST00000367402 STPG4Q8N801 248 aa6.27□□□□□ -1.41
NUP43-202ENST00000367402 GAGE2EQ4V326 116 aa6.26□□□□□ -1.41
NUP43-202ENST00000367402 COA6Q5JTJ3 125 aaKnown RBP6.26□□□□□ -1.41
NUP43-202ENST00000367402 GAGE2DQ9UEU5 116 aa6.26□□□□□ -1.41
NUP43-202ENST00000367402 IGLV5-39A0A0G2JS06 123 aa6.25□□□□□ -1.41
NUP43-202ENST00000367402 TMEM223A0PJW6 202 aa6.25□□□□□ -1.41
NUP43-202ENST00000367402 NDUFC2-KCTD14E9PQ53 114 aa6.25□□□□□ -1.41
NUP43-202ENST00000367402 TLX1NBP0CAT3 122 aa6.25□□□□□ -1.41
NUP43-202ENST00000367402 PLNP26678 52 aa6.25□□□□□ -1.41
NUP43-202ENST00000367402 Q6ZRP5 223 aa6.25□□□□□ -1.41
NUP43-202ENST00000367402 PMCHL2Q9BQD1 86 aa6.25□□□□□ -1.41
NUP43-202ENST00000367402 PLAC8Q9NZF1 115 aa6.25□□□□□ -1.41
NUP43-202ENST00000367402 SYS1-DBNDD2H3BUS1 97 aa6.24□□□□□ -1.41
NUP43-202ENST00000367402 DPM2O94777 84 aa6.24□□□□□ -1.41
NUP43-202ENST00000367402 PLA2G1BP04054 148 aaKnown RBP6.24□□□□□ -1.41
NUP43-202ENST00000367402 HSPG2P98160 4391 aa6.24□□□□□ -1.41
NUP43-202ENST00000367402 IGKCP01834 107 aa6.23□□□□□ -1.41
NUP43-202ENST00000367402 A0A1W2PNN7 141 aa6.22□□□□□ -1.41
NUP43-202ENST00000367402 KRTDAPP60985 99 aa6.22□□□□□ -1.41
NUP43-202ENST00000367402 C7orf33Q8WU49 177 aa6.22□□□□□ -1.41
NUP43-202ENST00000367402 ZNF625Q96I27 306 aaPredicted RBP6.22□□□□□ -1.41
NUP43-202ENST00000367402 DNAH8Q96JB1 4490 aa6.22□□□□□ -1.41
NUP43-202ENST00000367402 FAM168BA1KXE4 195 aa6.21□□□□□ -1.42
NUP43-202ENST00000367402 S100A6P06703 90 aa6.21□□□□□ -1.42
NUP43-202ENST00000367402 PFN2P35080 140 aa6.21□□□□□ -1.42
NUP43-202ENST00000367402 RPL37AP61513 92 aaKnown RBP6.21□□□□□ -1.42
NUP43-202ENST00000367402 HERVK_113P61574 105 aa6.21□□□□□ -1.42
NUP43-202ENST00000367402 SFTA2Q6UW10 78 aa6.21□□□□□ -1.42
NUP43-202ENST00000367402 PET117Q6UWS5 81 aa6.21□□□□□ -1.42
NUP43-202ENST00000367402 XAGE1AQ9HD64 81 aa6.21□□□□□ -1.42
NUP43-202ENST00000367402 C3orf79P0CE67 100 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms