RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 LOC100130705A0A1B0GUX0 176 aa-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 TNP1P09430 55 aa-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 SNCAP37840 140 aa-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 LSM6P62312 80 aaKnown RBP-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 NMSQ5H8A3 153 aa-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 TAC4Q86UU9 113 aa-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 CCDC32Q9BV29 185 aa-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 SEC11CQ9BY50 192 aa-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 DYNLRB1Q9NP97 96 aa-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 SS18L2Q9UHA2 77 aa-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 UBE2D4Q9Y2X8 147 aa-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 ARL2BPQ9Y2Y0 163 aa-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 ANKRD36A6QL64 1941 aa-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 ARHGEF10O15013 1369 aa-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 C5orf38Q86SI9 138 aa-2.28□□□□□ -2.77
RNU6-54P-201ENST00000365563 MAGOHBQ96A72 148 aaKnown RBP-2.28□□□□□ -2.77
RNU6-54P-201ENST00000365563 SAR1AQ9NR31 198 aa-2.28□□□□□ -2.77
RNU6-54P-201ENST00000365563 ERCC6Q03468 1493 aa-2.28□□□□□ -2.77
RNU6-54P-201ENST00000365563 NLRP1Q9C000 1473 aa-2.28□□□□□ -2.77
RNU6-54P-201ENST00000365563 TRBV20-1A0A075B6N2 111 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 TRAV13-2A0A0B4J235 113 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 SPTY2D1-AS1A0A0U1RR47 76 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 A0A1B0GU69 56 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 PFDN1O60925 122 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 SNCGO76070 127 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 IL5P05113 134 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 CCL7P80098 99 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 S100A7L2Q5SY68 101 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 TMEM78Q5T7P6 136 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 CFAP53Q96M91 514 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 MGST2Q99735 147 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 PARVGQ9HBI0 331 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 TRAPPC2LQ9UL33 140 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 LSM2Q9Y333 95 aaKnown RBP-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 ZFYVE9O95405 1425 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 C1orf167Q5SNV9 1468 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 IFT140Q96RY7 1462 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 KIAA1551Q9HCM1 1747 aa-2.29□□□□□ -2.78
RNU6-54P-201ENST00000365563 CDH23Q9H251 3354 aa-2.3□□□□□ -2.78
RNU6-54P-201ENST00000365563 KDM5CP41229 1560 aa-2.3□□□□□ -2.78
RNU6-54P-201ENST00000365563 CEP170BQ9Y4F5 1589 aaPredicted RBP-2.3□□□□□ -2.78
RNU6-54P-201ENST00000365563 PIGBOS1A0A0B4J2F0 54 aa-2.3□□□□□ -2.78
RNU6-54P-201ENST00000365563 LCE6AA0A183 80 aa-2.3□□□□□ -2.78
RNU6-54P-201ENST00000365563 HMGN4O00479 90 aa-2.3□□□□□ -2.78
RNU6-54P-201ENST00000365563 IFNA1P01562 189 aa-2.3□□□□□ -2.78
RNU6-54P-201ENST00000365563 IGLC1P0CG04 106 aa-2.3□□□□□ -2.78
RNU6-54P-201ENST00000365563 MIC13Q5XKP0 118 aa-2.3□□□□□ -2.78
RNU6-54P-201ENST00000365563 MRPL54Q6P161 138 aaKnown RBP-2.3□□□□□ -2.78
RNU6-54P-201ENST00000365563 DHRS4L2Q6PKH6 230 aa-2.3□□□□□ -2.78
RNU6-54P-201ENST00000365563 BANF2Q9H503 90 aa-2.3□□□□□ -2.78
RNU6-54P-201ENST00000365563 NXT2Q9NPJ8 142 aaKnown RBP-2.3□□□□□ -2.78
RNU6-54P-201ENST00000365563 RGPD3A6NKT7 1758 aaPredicted RBP-2.31□□□□□ -2.78
RNU6-54P-201ENST00000365563 ANKRD36CQ5JPF3 1778 aa-2.31□□□□□ -2.78
RNU6-54P-201ENST00000365563 RGPD4Q7Z3J3 1758 aa-2.31□□□□□ -2.78
RNU6-54P-201ENST00000365563 XRN1Q8IZH2 1706 aaKnown RBP-2.31□□□□□ -2.78
RNU6-54P-201ENST00000365563 EIF3AQ14152 1382 aaKnown RBP-2.31□□□□□ -2.78
RNU6-54P-201ENST00000365563 LINC01546A6NGU7 62 aa-2.31□□□□□ -2.78
RNU6-54P-201ENST00000365563 NDUFB6O95139 128 aa-2.31□□□□□ -2.78
RNU6-54P-201ENST00000365563 PAEPP09466 180 aa-2.31□□□□□ -2.78
RNU6-54P-201ENST00000365563 TCTAP57738 103 aa-2.31□□□□□ -2.78
RNU6-54P-201ENST00000365563 COX6B2Q6YFQ2 88 aa-2.31□□□□□ -2.78
RNU6-54P-201ENST00000365563 LCN9Q8WX39 176 aa-2.31□□□□□ -2.78
RNU6-54P-201ENST00000365563 SPTSSAQ969W0 71 aa-2.31□□□□□ -2.78
RNU6-54P-201ENST00000365563 CCDC115Q96NT0 180 aa-2.31□□□□□ -2.78
RNU6-54P-201ENST00000365563 PSENENQ9NZ42 101 aa-2.31□□□□□ -2.78
RNU6-54P-201ENST00000365563 BTAF1O14981 1849 aa-2.31□□□□□ -2.78
RNU6-54P-201ENST00000365563 ZNF831Q5JPB2 1677 aa-2.31□□□□□ -2.78
RNU6-54P-201ENST00000365563 FAM223BA6NKX1 122 aa-2.32□□□□□ -2.78
RNU6-54P-201ENST00000365563 DPM2O94777 84 aa-2.32□□□□□ -2.78
RNU6-54P-201ENST00000365563 POLR2HP52434 150 aaKnown RBP-2.32□□□□□ -2.78
RNU6-54P-201ENST00000365563 PRAP1Q96NZ9 151 aa-2.32□□□□□ -2.78
RNU6-54P-201ENST00000365563 ATP6V1DQ9Y5K8 247 aa-2.32□□□□□ -2.78
RNU6-54P-201ENST00000365563 PLB1Q6P1J6 1458 aa-2.33□□□□□ -2.78
RNU6-54P-201ENST00000365563 PLEKHH2Q8IVE3 1493 aa-2.33□□□□□ -2.78
RNU6-54P-201ENST00000365563 MBD5Q9P267 1494 aa-2.33□□□□□ -2.78
RNU6-54P-201ENST00000365563 EDC4Q6P2E9 1401 aaKnown RBP-2.33□□□□□ -2.78
RNU6-54P-201ENST00000365563 PRG4Q92954 1404 aaPredicted RBP-2.33□□□□□ -2.78
RNU6-54P-201ENST00000365563 DEFB136Q30KP8 78 aa-2.33□□□□□ -2.78
RNU6-54P-201ENST00000365563 PTRHD1Q6GMV3 140 aaKnown RBP-2.33□□□□□ -2.78
RNU6-54P-201ENST00000365563 THEM6Q8WUY1 208 aa-2.33□□□□□ -2.78
RNU6-54P-201ENST00000365563 ATP6V1G3Q96LB4 118 aa-2.33□□□□□ -2.78
RNU6-54P-201ENST00000365563 LRRC37AA6NMS7 1700 aa-2.34□□□□□ -2.78
RNU6-54P-201ENST00000365563 PKD1L3Q7Z443 1732 aa-2.34□□□□□ -2.78
RNU6-54P-201ENST00000365563 TMEM2Q9UHN6 1383 aa-2.34□□□□□ -2.78
RNU6-54P-201ENST00000365563 VPS13AQ96RL7 3174 aa-2.34□□□□□ -2.78
RNU6-54P-201ENST00000365563 TPM3P06753 285 aa-2.34□□□□□ -2.78
RNU6-54P-201ENST00000365563 C9orf153Q5TBE3 101 aa-2.34□□□□□ -2.78
RNU6-54P-201ENST00000365563 TMEM244Q5VVB8 128 aa-2.34□□□□□ -2.78
RNU6-54P-201ENST00000365563 TCTE3Q8IZS6 198 aa-2.34□□□□□ -2.78
RNU6-54P-201ENST00000365563 PP6455Q8WZ26 134 aa-2.34□□□□□ -2.78
RNU6-54P-201ENST00000365563 PSMG3Q9BT73 122 aaPredicted RBP-2.34□□□□□ -2.78
RNU6-54P-201ENST00000365563 TMEM191AQ9H0A3 160 aa-2.34□□□□□ -2.78
RNU6-54P-201ENST00000365563 CUX1P39880 1505 aa-2.34□□□□□ -2.78
RNU6-54P-201ENST00000365563 SHROOM2Q13796 1616 aa-2.35□□□□□ -2.78
RNU6-54P-201ENST00000365563 ANKRD30AQ9BXX3 1397 aa-2.35□□□□□ -2.78
RNU6-54P-201ENST00000365563 MMP24-AS1A0A0U1RRL7 71 aa-2.35□□□□□ -2.79
RNU6-54P-201ENST00000365563 MT-ND4LP03901 98 aa-2.35□□□□□ -2.79
RNU6-54P-201ENST00000365563 NCS1P62166 190 aa-2.35□□□□□ -2.79
RNU6-54P-201ENST00000365563 GNG3P63215 75 aa-2.35□□□□□ -2.79
RNU6-54P-201ENST00000365563 KRTAP19-2Q3LHN2 52 aa-2.35□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms