RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 TOMM7Q9P0U1 55 aa14.09□□□□□ -0.15
MAP1LC3A-201ENST00000360668 IBA57-AS1B1ANH7 110 aa14.09□□□□□ -0.15
MAP1LC3A-201ENST00000360668 H3BUT2 72 aa14.09□□□□□ -0.15
MAP1LC3A-201ENST00000360668 MUSTN1Q8IVN3 82 aa14.09□□□□□ -0.15
MAP1LC3A-201ENST00000360668 PLECQ15149 4684 aaKnown RBP14.08□□□□□ -0.15
MAP1LC3A-201ENST00000360668 UBE2DNLQ8IWF7 75 aa14.08□□□□□ -0.16
MAP1LC3A-201ENST00000360668 Q8IZM0 81 aa14.08□□□□□ -0.16
MAP1LC3A-201ENST00000360668 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.07□□□□□ -0.16
MAP1LC3A-201ENST00000360668 APOMO95445 188 aa14.07□□□□□ -0.16
MAP1LC3A-201ENST00000360668 KRTAP26-1Q6PEX3 210 aa14.07□□□□□ -0.16
MAP1LC3A-201ENST00000360668 A0A1W2PPM0 123 aa14.06□□□□□ -0.16
MAP1LC3A-201ENST00000360668 K7ERJ3 54 aa14.06□□□□□ -0.16
MAP1LC3A-201ENST00000360668 PRSS2P07478 247 aa14.06□□□□□ -0.16
MAP1LC3A-201ENST00000360668 ADAMTSL4-AS1Q5T5F5 129 aa14.06□□□□□ -0.16
MAP1LC3A-201ENST00000360668 COPS9Q8WXC6 57 aa14.06□□□□□ -0.16
MAP1LC3A-201ENST00000360668 C1orf43Q9BWL3 253 aa14.06□□□□□ -0.16
MAP1LC3A-201ENST00000360668 PPDPFQ9H3Y8 114 aa14.06□□□□□ -0.16
MAP1LC3A-201ENST00000360668 C6orf226Q5I0X4 101 aa14.05□□□□□ -0.16
MAP1LC3A-201ENST00000360668 STARD9Q9P2P6 4700 aa14.04□□□□□ -0.16
MAP1LC3A-201ENST00000360668 CFC1BP0CG36 223 aa14.04□□□□□ -0.16
MAP1LC3A-201ENST00000360668 CFC1P0CG37 223 aa14.04□□□□□ -0.16
MAP1LC3A-201ENST00000360668 FABP2P12104 132 aa14.04□□□□□ -0.16
MAP1LC3A-201ENST00000360668 GTF2H5Q6ZYL4 71 aa14.04□□□□□ -0.16
MAP1LC3A-201ENST00000360668 KMT2CQ8NEZ4 4911 aaKnown RBP14.03□□□□□ -0.16
MAP1LC3A-201ENST00000360668 A4D1N5 150 aa14.03□□□□□ -0.16
MAP1LC3A-201ENST00000360668 C3orf84H3BNL1 204 aa14.03□□□□□ -0.16
MAP1LC3A-201ENST00000360668 KIAA0087Q14695 138 aa14.03□□□□□ -0.16
MAP1LC3A-201ENST00000360668 MUC7Q8TAX7 377 aa14.03□□□□□ -0.16
MAP1LC3A-201ENST00000360668 A0A0B4J2C4 111 aa14.02□□□□□ -0.16
MAP1LC3A-201ENST00000360668 DNAH1Q9P2D7 4330 aa14.01□□□□□ -0.17
MAP1LC3A-201ENST00000360668 IGKV2D-24A0A075B6R9 120 aa14.01□□□□□ -0.17
MAP1LC3A-201ENST00000360668 GAGE10A6NGK3 116 aa14.01□□□□□ -0.17
MAP1LC3A-201ENST00000360668 CXCL5P42830 114 aa14.01□□□□□ -0.17
MAP1LC3A-201ENST00000360668 CFAP161Q6P656 301 aa14.01□□□□□ -0.17
MAP1LC3A-201ENST00000360668 RMI2Q96E14 147 aa14□□□□□ -0.17
MAP1LC3A-201ENST00000360668 Q9HAA7 133 aa14□□□□□ -0.17
MAP1LC3A-201ENST00000360668 PRO1854Q9UHT4 67 aa14□□□□□ -0.17
MAP1LC3A-201ENST00000360668 K7EP34 96 aa13.99□□□□□ -0.17
MAP1LC3A-201ENST00000360668 SPAG11BQ08648 103 aa13.99□□□□□ -0.17
MAP1LC3A-201ENST00000360668 MEIG1Q5JSS6 88 aa13.99□□□□□ -0.17
MAP1LC3A-201ENST00000360668 CKS1BP61024 79 aa13.98□□□□□ -0.17
MAP1LC3A-201ENST00000360668 PGPEP1Q9NXJ5 209 aa13.98□□□□□ -0.17
MAP1LC3A-201ENST00000360668 LYSTQ99698 3801 aa13.98□□□□□ -0.17
MAP1LC3A-201ENST00000360668 CASC10Q5T4H9 136 aa13.97□□□□□ -0.17
MAP1LC3A-201ENST00000360668 LINC00308Q8TCZ7 52 aa13.96□□□□□ -0.17
MAP1LC3A-201ENST00000360668 NAA38Q9BRA0 125 aaKnown RBP13.96□□□□□ -0.17
MAP1LC3A-201ENST00000360668 SPCS1Q9Y6A9 102 aa13.96□□□□□ -0.17
MAP1LC3A-201ENST00000360668 C2orf82Q6UX34 121 aa13.95□□□□□ -0.18
MAP1LC3A-201ENST00000360668 TSPAN13O95857 204 aa13.93□□□□□ -0.18
MAP1LC3A-201ENST00000360668 C15orf56Q8N910 161 aa13.93□□□□□ -0.18
MAP1LC3A-201ENST00000360668 KRTAP1-5Q9BYS1 174 aa13.93□□□□□ -0.18
MAP1LC3A-201ENST00000360668 ERG28Q9UKR5 140 aa13.93□□□□□ -0.18
MAP1LC3A-201ENST00000360668 LYRM7Q5U5X0 104 aa13.92□□□□□ -0.18
MAP1LC3A-201ENST00000360668 NTN5Q8WTR8 489 aaPredicted RBP13.92□□□□□ -0.18
MAP1LC3A-201ENST00000360668 VPS13DQ5THJ4 4388 aa13.92□□□□□ -0.18
MAP1LC3A-201ENST00000360668 A0A0U1RRA0 63 aa13.92□□□□□ -0.18
MAP1LC3A-201ENST00000360668 TTC32Q5I0X7 151 aa13.92□□□□□ -0.18
MAP1LC3A-201ENST00000360668 DAND5Q8N907 189 aa13.92□□□□□ -0.18
MAP1LC3A-201ENST00000360668 ZNF561-AS1K7EIQ3 104 aa13.91□□□□□ -0.18
MAP1LC3A-201ENST00000360668 EIF4EBP3O60516 100 aaPredicted RBP13.91□□□□□ -0.18
MAP1LC3A-201ENST00000360668 C6orf223Q8N319 242 aa13.91□□□□□ -0.18
MAP1LC3A-201ENST00000360668 GVQW2A0A096LPI5 108 aaPredicted RBP13.89□□□□□ -0.19
MAP1LC3A-201ENST00000360668 LINC00158P58513 81 aa13.89□□□□□ -0.19
MAP1LC3A-201ENST00000360668 TENM2Q9NT68 2774 aa13.88□□□□□ -0.19
MAP1LC3A-201ENST00000360668 NBDYA0A0U1RRE5 68 aa13.88□□□□□ -0.19
MAP1LC3A-201ENST00000360668 F8WDY8 70 aa13.88□□□□□ -0.19
MAP1LC3A-201ENST00000360668 COX17Q14061 63 aa13.88□□□□□ -0.19
MAP1LC3A-201ENST00000360668 HIGD2BQ4VC39 106 aa13.88□□□□□ -0.19
MAP1LC3A-201ENST00000360668 UNQ6190/PRO20217Q6UXQ8 127 aa13.88□□□□□ -0.19
MAP1LC3A-201ENST00000360668 LINC00526Q96FQ7 95 aa13.88□□□□□ -0.19
MAP1LC3A-201ENST00000360668 C2orf48Q96LS8 159 aa13.88□□□□□ -0.19
MAP1LC3A-201ENST00000360668 PFN2P35080 140 aa13.88□□□□□ -0.19
MAP1LC3A-201ENST00000360668 MIR7-3HGQ8N6C7 128 aa13.88□□□□□ -0.19
MAP1LC3A-201ENST00000360668 NPC2P61916 151 aa13.87□□□□□ -0.19
MAP1LC3A-201ENST00000360668 C10orf25Q5T742 122 aa13.87□□□□□ -0.19
MAP1LC3A-201ENST00000360668 SOSTDC1Q6X4U4 206 aa13.87□□□□□ -0.19
MAP1LC3A-201ENST00000360668 RYR3Q15413 4870 aa13.86□□□□□ -0.19
MAP1LC3A-201ENST00000360668 TRBV20-1A0A075B6N2 111 aa13.85□□□□□ -0.19
MAP1LC3A-201ENST00000360668 CAMK2N2Q96S95 79 aa13.84□□□□□ -0.19
MAP1LC3A-201ENST00000360668 LOC107984156A0A0G2JMH3 177 aa13.83□□□□□ -0.19
MAP1LC3A-201ENST00000360668 TRBV30A0A0K0K1B3 111 aa13.83□□□□□ -0.19
MAP1LC3A-201ENST00000360668 ARL17AQ8IVW1 177 aa13.83□□□□□ -0.19
MAP1LC3A-201ENST00000360668 USP17L23D6RBM5 183 aa13.83□□□□□ -0.2
MAP1LC3A-201ENST00000360668 C9orf116Q5BN46 136 aaPredicted RBP13.82□□□□□ -0.2
MAP1LC3A-201ENST00000360668 C6orf48Q9UBA6 75 aa13.82□□□□□ -0.2
MAP1LC3A-201ENST00000360668 SCGB1C2P0DMR2 95 aa13.8□□□□□ -0.2
MAP1LC3A-201ENST00000360668 PSMB2P49721 201 aa13.8□□□□□ -0.2
MAP1LC3A-201ENST00000360668 F8W1H4 67 aa13.79□□□□□ -0.2
MAP1LC3A-201ENST00000360668 Q1RN00 199 aa13.79□□□□□ -0.2
MAP1LC3A-201ENST00000360668 Q6ZRU5 148 aa13.79□□□□□ -0.2
MAP1LC3A-201ENST00000360668 SND1-IT1Q9HBX3 110 aa13.79□□□□□ -0.2
MAP1LC3A-201ENST00000360668 TRAV13-2A0A0B4J235 113 aa13.78□□□□□ -0.2
MAP1LC3A-201ENST00000360668 PSCAO43653 123 aa13.78□□□□□ -0.2
MAP1LC3A-201ENST00000360668 H7C2G1 150 aa13.77□□□□□ -0.21
MAP1LC3A-201ENST00000360668 COX6CP09669 75 aa13.77□□□□□ -0.21
MAP1LC3A-201ENST00000360668 SYCNQ0VAF6 134 aa13.77□□□□□ -0.21
MAP1LC3A-201ENST00000360668 H3BMG7 143 aa13.76□□□□□ -0.21
MAP1LC3A-201ENST00000360668 RPL13AP40429 203 aaKnown RBP13.76□□□□□ -0.21
MAP1LC3A-201ENST00000360668 DNAH10Q8IVF4 4471 aa13.75□□□□□ -0.21
MAP1LC3A-201ENST00000360668 LCE6AA0A183 80 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms