RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 SONP18583 2426 aaKnown RBP12.13□□□□□ -0.47
COL4A2-201ENST00000360467 NTM-AS1Q6ZSK4 140 aa12.12□□□□□ -0.47
COL4A2-201ENST00000360467 ADAMTSL4-AS1Q5T5F5 129 aa12.12□□□□□ -0.47
COL4A2-201ENST00000360467 Q6ZRU5 148 aa12.12□□□□□ -0.47
COL4A2-201ENST00000360467 XGP55808 180 aa12.12□□□□□ -0.47
COL4A2-201ENST00000360467 EP400Q96L91 3159 aa12.11□□□□□ -0.47
COL4A2-201ENST00000360467 C2orf48Q96LS8 159 aa12.11□□□□□ -0.47
COL4A2-201ENST00000360467 LINC01547P58512 204 aaPredicted RBP12.1□□□□□ -0.47
COL4A2-201ENST00000360467 TET2Q6N021 2002 aaPredicted RBP12.1□□□□□ -0.47
COL4A2-201ENST00000360467 LINC00208Q96KT6 92 aa12.1□□□□□ -0.47
COL4A2-201ENST00000360467 FAM240AA0A1B0GVK7 77 aa12.1□□□□□ -0.47
COL4A2-201ENST00000360467 ACACBO00763 2458 aa12.09□□□□□ -0.47
COL4A2-201ENST00000360467 SERP2Q8N6R1 65 aa12.08□□□□□ -0.48
COL4A2-201ENST00000360467 A0A087WSZ3 146 aa12.08□□□□□ -0.48
COL4A2-201ENST00000360467 Q6Q795 121 aa12.07□□□□□ -0.48
COL4A2-201ENST00000360467 A0A087WVE0 104 aa12.07□□□□□ -0.48
COL4A2-201ENST00000360467 CCDC179H3BU77 68 aa12.07□□□□□ -0.48
COL4A2-201ENST00000360467 CNFNQ9BYD5 112 aa12.07□□□□□ -0.48
COL4A2-201ENST00000360467 URB1-AS1Q96HZ7 61 aa12.06□□□□□ -0.48
COL4A2-201ENST00000360467 PRYO14603 147 aa12.06□□□□□ -0.48
COL4A2-201ENST00000360467 LINC00575Q6W349 94 aa12.06□□□□□ -0.48
COL4A2-201ENST00000360467 TRBV7-6A0A0J9YX20 115 aa12.04□□□□□ -0.48
COL4A2-201ENST00000360467 NHLRC4P0CG21 123 aaPredicted RBP12.04□□□□□ -0.48
COL4A2-201ENST00000360467 C22orf24Q9Y442 160 aa12.02□□□□□ -0.48
COL4A2-201ENST00000360467 LINC00337Q8N6G1 96 aa12.02□□□□□ -0.48
COL4A2-201ENST00000360467 AGRNO00468 2067 aa12.02□□□□□ -0.49
COL4A2-201ENST00000360467 SPACA4Q8TDM5 124 aa12.01□□□□□ -0.49
COL4A2-201ENST00000360467 C10orf142B7Z368 130 aa12.01□□□□□ -0.49
COL4A2-201ENST00000360467 CHTF8P0CG12 524 aa12□□□□□ -0.49
COL4A2-201ENST00000360467 SMCR5Q8TEV8 140 aa12□□□□□ -0.49
COL4A2-201ENST00000360467 PIEZO2Q9H5I5 2752 aa11.99□□□□□ -0.49
COL4A2-201ENST00000360467 BEAN1Q3B7T3 259 aa11.99□□□□□ -0.49
COL4A2-201ENST00000360467 SOSTDC1Q6X4U4 206 aa11.99□□□□□ -0.49
COL4A2-201ENST00000360467 MUC7Q8TAX7 377 aa11.99□□□□□ -0.49
COL4A2-201ENST00000360467 AMELXQ99217 191 aa11.99□□□□□ -0.49
COL4A2-201ENST00000360467 KRTAP24-1Q3LI83 254 aa11.99□□□□□ -0.49
COL4A2-201ENST00000360467 Q6JHZ5 121 aa11.99□□□□□ -0.49
COL4A2-201ENST00000360467 V9GYY9 64 aa11.99□□□□□ -0.49
COL4A2-201ENST00000360467 NDUFC1O43677 76 aa11.98□□□□□ -0.49
COL4A2-201ENST00000360467 HCG22E2RYF7 251 aa11.97□□□□□ -0.49
COL4A2-201ENST00000360467 IGKV2D-30A0A075B6S6 120 aa11.97□□□□□ -0.49
COL4A2-201ENST00000360467 IGKV2-30P06310 120 aa11.97□□□□□ -0.49
COL4A2-201ENST00000360467 LINC00310P59036 64 aa11.96□□□□□ -0.49
COL4A2-201ENST00000360467 Q8N3U1 123 aa11.96□□□□□ -0.49
COL4A2-201ENST00000360467 H0Y9P7 68 aa11.96□□□□□ -0.5
COL4A2-201ENST00000360467 A0A1B0GUV1 79 aa11.95□□□□□ -0.5
COL4A2-201ENST00000360467 NAV3Q8IVL0 2385 aa11.95□□□□□ -0.5
COL4A2-201ENST00000360467 COX7CP15954 63 aa11.95□□□□□ -0.5
COL4A2-201ENST00000360467 ATP5EP56381 51 aaPredicted RBP11.94□□□□□ -0.5
COL4A2-201ENST00000360467 MOBPQ13875 183 aa11.94□□□□□ -0.5
COL4A2-201ENST00000360467 LIMD2Q9BT23 127 aa11.93□□□□□ -0.5
COL4A2-201ENST00000360467 Q9UF83 564 aa11.93□□□□□ -0.5
COL4A2-201ENST00000360467 CSDC2Q9Y534 153 aaKnown RBP11.93□□□□□ -0.5
COL4A2-201ENST00000360467 ABCA2Q9BZC7 2435 aa11.92□□□□□ -0.5
COL4A2-201ENST00000360467 PHF5AQ7RTV0 110 aaKnown RBP11.91□□□□□ -0.5
COL4A2-201ENST00000360467 ATRXP46100 2492 aa11.91□□□□□ -0.5
COL4A2-201ENST00000360467 IGF2RP11717 2491 aa11.9□□□□□ -0.5
COL4A2-201ENST00000360467 NAV2Q8IVL1 2488 aa11.9□□□□□ -0.5
COL4A2-201ENST00000360467 C11orf72Q8NBR9 251 aa11.9□□□□□ -0.5
COL4A2-201ENST00000360467 KIAA0087Q14695 138 aa11.9□□□□□ -0.5
COL4A2-201ENST00000360467 CCDC168Q8NDH2 2452 aa11.89□□□□□ -0.51
COL4A2-201ENST00000360467 IMUPQ9GZP8 106 aa11.89□□□□□ -0.51
COL4A2-201ENST00000360467 C16orf90A8MZG2 172 aa11.88□□□□□ -0.51
COL4A2-201ENST00000360467 CRYGAP11844 174 aa11.88□□□□□ -0.51
COL4A2-201ENST00000360467 C7orf65Q6ZTY9 151 aa11.88□□□□□ -0.51
COL4A2-201ENST00000360467 LINC00315P59091 139 aa11.88□□□□□ -0.51
COL4A2-201ENST00000360467 RTL8CO15255 209 aa11.88□□□□□ -0.51
COL4A2-201ENST00000360467 Q8N2B8 174 aa11.87□□□□□ -0.51
COL4A2-201ENST00000360467 TRAV7A0A075B6U4 112 aa11.87□□□□□ -0.51
COL4A2-201ENST00000360467 PSPHP1O15172 72 aa11.87□□□□□ -0.51
COL4A2-201ENST00000360467 NCOR2Q9Y618 2525 aa11.87□□□□□ -0.51
COL4A2-201ENST00000360467 FAM229AH3BQW9 127 aa11.86□□□□□ -0.51
COL4A2-201ENST00000360467 A0A096LNJ9 63 aa11.86□□□□□ -0.51
COL4A2-201ENST00000360467 F8WDY8 70 aa11.86□□□□□ -0.51
COL4A2-201ENST00000360467 LINC00167Q96N53 147 aa11.86□□□□□ -0.51
COL4A2-201ENST00000360467 COL4A2P08572 1712 aa11.86□□□□□ -0.51
COL4A2-201ENST00000360467 COL27A1Q8IZC6 1860 aaPredicted RBP11.85□□□□□ -0.51
COL4A2-201ENST00000360467 TRBV7-7A0A0K0K1E9 115 aa11.84□□□□□ -0.51
COL4A2-201ENST00000360467 C6orf48Q9UBA6 75 aa11.83□□□□□ -0.52
COL4A2-201ENST00000360467 GOLGB1Q14789 3259 aaKnown RBP11.83□□□□□ -0.52
COL4A2-201ENST00000360467 PTPRBP23467 1997 aa11.79□□□□□ -0.52
COL4A2-201ENST00000360467 SMIM29Q86T20 159 aa11.79□□□□□ -0.52
COL4A2-201ENST00000360467 COX8CQ7Z4L0 72 aa11.78□□□□□ -0.52
COL4A2-201ENST00000360467 LINC00846Q9NV44 126 aa11.78□□□□□ -0.52
COL4A2-201ENST00000360467 TYMSOSQ8TAI1 123 aa11.77□□□□□ -0.52
COL4A2-201ENST00000360467 CACNA1AO00555 2505 aa11.77□□□□□ -0.52
COL4A2-201ENST00000360467 C1orf64Q8NEQ6 169 aa11.77□□□□□ -0.53
COL4A2-201ENST00000360467 LINC00588Q9Y4M8 146 aa11.77□□□□□ -0.53
COL4A2-201ENST00000360467 KIF25-AS1Q9Y6Z4 181 aa11.77□□□□□ -0.53
COL4A2-201ENST00000360467 NBDYA0A0U1RRE5 68 aa11.76□□□□□ -0.53
COL4A2-201ENST00000360467 J3QL48 77 aa11.76□□□□□ -0.53
COL4A2-201ENST00000360467 LINC01561Q8N1V8 128 aa11.76□□□□□ -0.53
COL4A2-201ENST00000360467 ST20-AS1Q8NBB2 130 aa11.73□□□□□ -0.53
COL4A2-201ENST00000360467 SPATA3Q8NHX4 192 aa11.72□□□□□ -0.53
COL4A2-201ENST00000360467 EPM2AB3EWF7 344 aa11.72□□□□□ -0.53
COL4A2-201ENST00000360467 hDV103S1A0JD37 113 aa11.71□□□□□ -0.53
COL4A2-201ENST00000360467 RPL37AP61513 92 aaKnown RBP11.71□□□□□ -0.53
COL4A2-201ENST00000360467 FAM168BA1KXE4 195 aa11.7□□□□□ -0.54
COL4A2-201ENST00000360467 PMAIP1Q13794 54 aa11.7□□□□□ -0.54
COL4A2-201ENST00000360467 IGHV3OR16-9A0A0B4J2B5 98 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms