RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 IGIPA6NJ69 53 aa13.54□□□□□ -0.24
YIF1A-201ENST00000359461 BCE1O60756 84 aa13.54□□□□□ -0.24
YIF1A-201ENST00000359461 RPL28P46779 137 aaKnown RBP13.54□□□□□ -0.24
YIF1A-201ENST00000359461 MRPL55Q7Z7F7 128 aaKnown RBP13.54□□□□□ -0.24
YIF1A-201ENST00000359461 ALKBH7Q9BT30 221 aaPredicted RBP13.54□□□□□ -0.24
YIF1A-201ENST00000359461 F8VRH5 84 aa13.53□□□□□ -0.24
YIF1A-201ENST00000359461 LCE2AQ5TA79 106 aaPredicted RBP13.53□□□□□ -0.24
YIF1A-201ENST00000359461 ORMDL2Q53FV1 153 aa13.52□□□□□ -0.25
YIF1A-201ENST00000359461 CDKN2A-AS1Q9UH64 79 aa13.52□□□□□ -0.25
YIF1A-201ENST00000359461 K7EMI3 77 aa13.51□□□□□ -0.25
YIF1A-201ENST00000359461 CRYGAP11844 174 aa13.51□□□□□ -0.25
YIF1A-201ENST00000359461 HERVK_113P63121 156 aa13.51□□□□□ -0.25
YIF1A-201ENST00000359461 TYMSOSQ8TAI1 123 aa13.5□□□□□ -0.25
YIF1A-201ENST00000359461 SEC11AP67812 179 aa13.49□□□□□ -0.25
YIF1A-201ENST00000359461 CXCL5P42830 114 aa13.48□□□□□ -0.25
YIF1A-201ENST00000359461 PAPPA-AS1Q5QFB9 102 aa13.46□□□□□ -0.25
YIF1A-201ENST00000359461 KRTAP13-1Q8IUC0 172 aa13.46□□□□□ -0.25
YIF1A-201ENST00000359461 LINC00167Q96N53 147 aa13.46□□□□□ -0.25
YIF1A-201ENST00000359461 TIMM17AQ99595 171 aa13.46□□□□□ -0.25
YIF1A-201ENST00000359461 FAT4Q6V0I7 4981 aa13.46□□□□□ -0.26
YIF1A-201ENST00000359461 KRTAP13-2Q52LG2 175 aa13.45□□□□□ -0.26
YIF1A-201ENST00000359461 NXT2Q9NPJ8 142 aaKnown RBP13.45□□□□□ -0.26
YIF1A-201ENST00000359461 SMIM1B2RUZ4 78 aa13.44□□□□□ -0.26
YIF1A-201ENST00000359461 GEMIN7Q9H840 131 aaKnown RBP13.44□□□□□ -0.26
YIF1A-201ENST00000359461 IGLV5-37A0A075B6J1 123 aa13.43□□□□□ -0.26
YIF1A-201ENST00000359461 RPL37AP8A6NKH3 93 aa13.43□□□□□ -0.26
YIF1A-201ENST00000359461 ANAPC11Q9NYG5 84 aa13.42□□□□□ -0.26
YIF1A-201ENST00000359461 TOMM6Q96B49 74 aa13.41□□□□□ -0.26
YIF1A-201ENST00000359461 G0S2P27469 103 aa13.4□□□□□ -0.26
YIF1A-201ENST00000359461 PNRC1Q12796 327 aaPredicted RBP13.4□□□□□ -0.26
YIF1A-201ENST00000359461 FAM229BQ4G0N7 80 aa13.4□□□□□ -0.26
YIF1A-201ENST00000359461 PDZD11Q5EBL8 140 aa13.4□□□□□ -0.26
YIF1A-201ENST00000359461 ANAPC16Q96DE5 110 aa13.4□□□□□ -0.26
YIF1A-201ENST00000359461 IGLV5-45A0A087WSX0 123 aa13.39□□□□□ -0.27
YIF1A-201ENST00000359461 COX7B2Q8TF08 81 aa13.39□□□□□ -0.27
YIF1A-201ENST00000359461 MUC17Q685J3 4493 aa13.39□□□□□ -0.27
YIF1A-201ENST00000359461 GAGE10A6NGK3 116 aa13.38□□□□□ -0.27
YIF1A-201ENST00000359461 RETNLBQ9BQ08 111 aa13.38□□□□□ -0.27
YIF1A-201ENST00000359461 TINCRA0A1B0GVN0 87 aa13.37□□□□□ -0.27
YIF1A-201ENST00000359461 TPRXLQ17RH7 258 aa13.37□□□□□ -0.27
YIF1A-201ENST00000359461 ERASQ7Z444 233 aa13.37□□□□□ -0.27
YIF1A-201ENST00000359461 MT-ND4LP03901 98 aa13.36□□□□□ -0.27
YIF1A-201ENST00000359461 LINC00304Q8N9R0 145 aa13.36□□□□□ -0.27
YIF1A-201ENST00000359461 A0A1B0GVG6 124 aa13.35□□□□□ -0.27
YIF1A-201ENST00000359461 UBE2AP49459 152 aa13.35□□□□□ -0.27
YIF1A-201ENST00000359461 NKAPP1Q8N9T2 125 aa13.34□□□□□ -0.27
YIF1A-201ENST00000359461 CTAG1AP78358 180 aa13.33□□□□□ -0.28
YIF1A-201ENST00000359461 ADCYAP1P18509 176 aa13.32□□□□□ -0.28
YIF1A-201ENST00000359461 SCGB3A1Q96QR1 104 aa13.32□□□□□ -0.28
YIF1A-201ENST00000359461 IGKV2-28A0A075B6P5 120 aa13.29□□□□□ -0.28
YIF1A-201ENST00000359461 SCO1O75880 301 aa13.29□□□□□ -0.28
YIF1A-201ENST00000359461 IGKV2D-28P01615 120 aa13.29□□□□□ -0.28
YIF1A-201ENST00000359461 SPINK8P0C7L1 97 aa13.29□□□□□ -0.28
YIF1A-201ENST00000359461 RAB5BP61020 215 aa13.29□□□□□ -0.28
YIF1A-201ENST00000359461 CDIP1Q9H305 208 aa13.29□□□□□ -0.28
YIF1A-201ENST00000359461 LINC01546A6NGU7 62 aa13.28□□□□□ -0.28
YIF1A-201ENST00000359461 CST9LQ9H4G1 147 aa13.28□□□□□ -0.28
YIF1A-201ENST00000359461 IGKV2D-26A0A0A0MRZ7 120 aa13.27□□□□□ -0.29
YIF1A-201ENST00000359461 LINC01549A6NIU2 74 aa13.27□□□□□ -0.29
YIF1A-201ENST00000359461 KIAA1644Q3SXP7 199 aa13.27□□□□□ -0.29
YIF1A-201ENST00000359461 IGLV7-46A0A075B6I9 117 aa13.26□□□□□ -0.29
YIF1A-201ENST00000359461 PRLHP81277 87 aa13.26□□□□□ -0.29
YIF1A-201ENST00000359461 KRTAP9-6A0A140TA67 174 aa13.25□□□□□ -0.29
YIF1A-201ENST00000359461 ATP5LO75964 103 aa13.24□□□□□ -0.29
YIF1A-201ENST00000359461 VPREB1P12018 145 aa13.24□□□□□ -0.29
YIF1A-201ENST00000359461 TMEM126AQ9H061 195 aa13.24□□□□□ -0.29
YIF1A-201ENST00000359461 MRPL18Q9H0U6 180 aaKnown RBP13.24□□□□□ -0.29
YIF1A-201ENST00000359461 PMVKQ15126 192 aa13.23□□□□□ -0.29
YIF1A-201ENST00000359461 IGLV5-39A0A0G2JS06 123 aa13.22□□□□□ -0.29
YIF1A-201ENST00000359461 TMEM238C9JI98 176 aa13.21□□□□□ -0.29
YIF1A-201ENST00000359461 FAM19A1Q7Z5A9 133 aa13.21□□□□□ -0.29
YIF1A-201ENST00000359461 H3BRM9 83 aa13.2□□□□□ -0.3
YIF1A-201ENST00000359461 M0R378 163 aa13.2□□□□□ -0.3
YIF1A-201ENST00000359461 PFN2P35080 140 aa13.2□□□□□ -0.3
YIF1A-201ENST00000359461 SND1-IT1Q9HBX3 110 aa13.2□□□□□ -0.3
YIF1A-201ENST00000359461 TRAV9-1A0A075B6T8 112 aa13.19□□□□□ -0.3
YIF1A-201ENST00000359461 C3orf22Q8N5N4 141 aa13.19□□□□□ -0.3
YIF1A-201ENST00000359461 PLEKHB2Q96CS7 222 aa13.19□□□□□ -0.3
YIF1A-201ENST00000359461 IGLC3P0DOY3 106 aa13.18□□□□□ -0.3
YIF1A-201ENST00000359461 PPDPFQ9H3Y8 114 aa13.18□□□□□ -0.3
YIF1A-201ENST00000359461 Q8NDZ9 215 aa13.17□□□□□ -0.3
YIF1A-201ENST00000359461 ERG28Q9UKR5 140 aa13.17□□□□□ -0.3
YIF1A-201ENST00000359461 RPL24P83731 157 aaKnown RBP13.15□□□□□ -0.3
YIF1A-201ENST00000359461 COX17Q14061 63 aa13.15□□□□□ -0.3
YIF1A-201ENST00000359461 GNB1LQ9BYB4 327 aa13.14□□□□□ -0.31
YIF1A-201ENST00000359461 ZNF22P17026 224 aaPredicted RBP13.13□□□□□ -0.31
YIF1A-201ENST00000359461 SPAG11AQ6PDA7 123 aa13.13□□□□□ -0.31
YIF1A-201ENST00000359461 CBLN2Q8IUK8 224 aa13.13□□□□□ -0.31
YIF1A-201ENST00000359461 FP248Q71RG6 208 aaPredicted RBP13.11□□□□□ -0.31
YIF1A-201ENST00000359461 FA2HQ7L5A8 372 aa13.11□□□□□ -0.31
YIF1A-201ENST00000359461 A0A096LNJ9 63 aa13.1□□□□□ -0.31
YIF1A-201ENST00000359461 RAB14P61106 215 aa13.1□□□□□ -0.31
YIF1A-201ENST00000359461 SPRR4Q96PI1 79 aa13.1□□□□□ -0.31
YIF1A-201ENST00000359461 HIGD2AQ9BW72 106 aa13.09□□□□□ -0.31
YIF1A-201ENST00000359461 SMCO4Q9NRQ5 59 aa13.09□□□□□ -0.31
YIF1A-201ENST00000359461 SFTA2Q6UW10 78 aa13.07□□□□□ -0.32
YIF1A-201ENST00000359461 ZNF625Q96I27 306 aaPredicted RBP13.07□□□□□ -0.32
YIF1A-201ENST00000359461 KRTAP13-3Q3SY46 172 aa13.06□□□□□ -0.32
YIF1A-201ENST00000359461 COX19Q49B96 90 aa13.05□□□□□ -0.32
YIF1A-201ENST00000359461 S100PP25815 95 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms