RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 FCER1GP30273 86 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 ZC4H2Q9NQZ6 224 aa0.94□□□□□ -2.26
SMARCAD1-202ENST00000359052 SLC25A20O43772 301 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 SSNA1O43805 119 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 MIC13Q5XKP0 118 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 OPRPNQ99935 248 aaPredicted RBP0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 TRAV27A0A087WT01 109 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 CCL22O00626 93 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 PSCAO43653 123 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 KRTAP11-1Q8IUC1 163 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 NUP37Q8NFH4 326 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 LINC00472Q9H8W2 130 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 C19orf25Q9UFG5 118 aaPredicted RBP0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 PKIGQ9Y2B9 76 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 XCL1P47992 114 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 MRPL51Q4U2R6 128 aaKnown RBP0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 LINC01554Q52M75 96 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 Q56UQ5 140 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 Q86TA4 180 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 BORCS7Q96B45 105 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 GVINP1Q7Z2Y8 2422 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 KIAA0100Q14667 2235 aaKnown RBP0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGLV7-46A0A075B6I9 117 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGKV4-1P06312 121 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 MP68P56378 58 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 HERVK_113P61574 105 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 Q6ZQT0 140 aa0.93□□□□□ -2.26
SMARCAD1-202ENST00000359052 TRAV2A0A0B4J234 112 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGKV2-29A2NJV5 120 aaPredicted RBP0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 M0R135 149 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGHV1-69P01742 117 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 TCTAP57738 103 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 MRPS21P82921 87 aaKnown RBP0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 MOBPQ13875 183 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 CENPWQ5EE01 88 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 DSCR8Q96T75 97 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 TIMM17AQ99595 171 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGLV5-48A0A075B6I7 105 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 SH2D1AO60880 128 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 HBDP02042 147 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 FAUP35544 74 aaKnown RBP0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 BAGE3Q86Y29 109 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 LYPD1Q8N2G4 141 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 RNF5Q99942 180 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 SYNGR2O43760 224 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 DNAH10OSP0CZ25 163 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 ELOF1P60002 83 aaKnown RBP0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 SPATA8Q6RVD6 105 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 TCEAL2Q9H3H9 227 aaPredicted RBP0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 PRO2289Q9P1D8 64 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 LINC01558Q9Y6Z2 57 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 SPTBP11277 2137 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 TRAV3A0A0B4J244 114 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 SPTY2D1-AS1A0A0U1RR47 76 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 ODF3BA8MYP8 253 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 C11orf94C9JXX5 98 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 F8VRH5 84 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 LEPROTL1O95214 131 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGKV2-30P06310 120 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 PMVKQ15126 192 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 C2orf66Q6UXQ4 117 aa0.92□□□□□ -2.26
SMARCAD1-202ENST00000359052 IGHV3-73A0A0B4J1V6 119 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 COX6A1P12074 109 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 CD24P25063 80 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 IFI27P40305 119 aaPredicted RBP0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 ATP5EP56381 51 aaPredicted RBP0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 Q6ZS52 159 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 INTS1Q8N201 2190 aaKnown RBP0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 TRAV8-1A0A0A6YYK1 113 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 PDE6GP18545 87 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 DYNLT1P63172 113 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 ADIGQ0VDE8 80 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 FAM223AQ8IWN6 122 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 RNF182Q8N6D2 247 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 OR8A1Q8NGG7 326 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 Q96NJ1 140 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 SMIM7Q9BQ49 75 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 TNCP24821 2201 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 TRAV7A0A075B6U4 112 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 SMIM13P0DJ93 91 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 RNASE3P12724 160 aaKnown RBP0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 OSTNP61366 133 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 FAM27BQ5VT28 67 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 ANAPC11Q9NYG5 84 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 FIS1Q9Y3D6 152 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 S4R3C0 116 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 EEF1AKMT3Q96AZ1 226 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 CHCHD7Q9BUK0 85 aa0.91□□□□□ -2.26
SMARCAD1-202ENST00000359052 RP1L1Q8IWN7 2480 aaPredicted RBP0.9□□□□□ -2.26
SMARCAD1-202ENST00000359052 TRAV10A0A0B4J240 114 aa0.9□□□□□ -2.26
SMARCAD1-202ENST00000359052 HIGD1CA8MV81 97 aa0.9□□□□□ -2.26
SMARCAD1-202ENST00000359052 ARMS2P0C7Q2 107 aa0.9□□□□□ -2.26
SMARCAD1-202ENST00000359052 SPRR1AP35321 89 aa0.9□□□□□ -2.26
SMARCAD1-202ENST00000359052 ATP5EP2Q5VTU8 51 aa0.9□□□□□ -2.26
SMARCAD1-202ENST00000359052 ATP11AUNQ6ZP68 121 aa0.9□□□□□ -2.26
SMARCAD1-202ENST00000359052 FAM213BQ8TBF2 198 aa0.9□□□□□ -2.26
SMARCAD1-202ENST00000359052 I3L3M4 83 aa0.9□□□□□ -2.27
SMARCAD1-202ENST00000359052 IGKV1-17P01599 117 aa0.9□□□□□ -2.27
SMARCAD1-202ENST00000359052 IGKV3-15P01624 115 aa0.9□□□□□ -2.27
SMARCAD1-202ENST00000359052 KRTAP10-5P60370 271 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms