RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 DNAH5Q8TE73 4624 aa9.91□□□□□ -0.82
TPM1-206ENST00000358278 F8WDY8 70 aa9.9□□□□□ -0.83
TPM1-206ENST00000358278 C2orf82Q6UX34 121 aa9.9□□□□□ -0.83
TPM1-206ENST00000358278 Q6ZRU5 148 aa9.9□□□□□ -0.83
TPM1-206ENST00000358278 C16orf90A8MZG2 172 aa9.89□□□□□ -0.83
TPM1-206ENST00000358278 CXCL5P42830 114 aa9.89□□□□□ -0.83
TPM1-206ENST00000358278 ATOH7Q8N100 152 aa9.89□□□□□ -0.83
TPM1-206ENST00000358278 SCGB1D1O95968 90 aa9.88□□□□□ -0.83
TPM1-206ENST00000358278 LINC01620Q4KN68 170 aa9.88□□□□□ -0.83
TPM1-206ENST00000358278 GCSHP23434 173 aa9.87□□□□□ -0.83
TPM1-206ENST00000358278 UNQ6190/PRO20217Q6UXQ8 127 aa9.87□□□□□ -0.83
TPM1-206ENST00000358278 C9orf163Q8N9P6 203 aa9.87□□□□□ -0.83
TPM1-206ENST00000358278 C10orf25Q5T742 122 aa9.87□□□□□ -0.83
TPM1-206ENST00000358278 LEPROTO15243 131 aa9.86□□□□□ -0.83
TPM1-206ENST00000358278 STPG4Q8N801 248 aa9.86□□□□□ -0.83
TPM1-206ENST00000358278 PLEKHB2Q96CS7 222 aa9.86□□□□□ -0.83
TPM1-206ENST00000358278 TRBV30A0A0K0K1B3 111 aa9.85□□□□□ -0.83
TPM1-206ENST00000358278 E9PLD3 99 aa9.85□□□□□ -0.83
TPM1-206ENST00000358278 C6orf48Q9UBA6 75 aa9.85□□□□□ -0.83
TPM1-206ENST00000358278 EPPK1P58107 5090 aaKnown RBP9.84□□□□□ -0.83
TPM1-206ENST00000358278 SFTA2Q6UW10 78 aa9.84□□□□□ -0.83
TPM1-206ENST00000358278 J3QQQ9 107 aa9.83□□□□□ -0.84
TPM1-206ENST00000358278 LGALS3P17931 250 aaKnown RBP9.83□□□□□ -0.84
TPM1-206ENST00000358278 RNF151Q2KHN1 245 aa9.83□□□□□ -0.84
TPM1-206ENST00000358278 PKIGQ9Y2B9 76 aa9.83□□□□□ -0.84
TPM1-206ENST00000358278 HSBP1L1C9JCN9 74 aa9.82□□□□□ -0.84
TPM1-206ENST00000358278 TSPEAR-AS2P59090 65 aa9.82□□□□□ -0.84
TPM1-206ENST00000358278 NDUFA12Q9UI09 145 aa9.82□□□□□ -0.84
TPM1-206ENST00000358278 A6NJY4 79 aa9.82□□□□□ -0.84
TPM1-206ENST00000358278 C9orf116Q5BN46 136 aaPredicted RBP9.82□□□□□ -0.84
TPM1-206ENST00000358278 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
TPM1-206ENST00000358278 KRTAP10-1P60331 282 aa9.81□□□□□ -0.84
TPM1-206ENST00000358278 RPL18AQ02543 176 aaKnown RBP9.81□□□□□ -0.84
TPM1-206ENST00000358278 JOSD1Q15040 202 aaPredicted RBP9.81□□□□□ -0.84
TPM1-206ENST00000358278 ZNF625Q96I27 306 aaPredicted RBP9.81□□□□□ -0.84
TPM1-206ENST00000358278 MYMXA0A1B0GTQ4 84 aa9.8□□□□□ -0.84
TPM1-206ENST00000358278 MAJINQ3KP22 176 aa9.8□□□□□ -0.84
TPM1-206ENST00000358278 SDIM1Q6ZPB5 146 aa9.8□□□□□ -0.84
TPM1-206ENST00000358278 NMUP48645 174 aa9.79□□□□□ -0.84
TPM1-206ENST00000358278 ANKRD39Q53RE8 183 aa9.79□□□□□ -0.84
TPM1-206ENST00000358278 DYNC1H1Q14204 4646 aaKnown RBP9.79□□□□□ -0.84
TPM1-206ENST00000358278 LRP1BQ9NZR2 4599 aa9.79□□□□□ -0.84
TPM1-206ENST00000358278 IGKV2D-26A0A0A0MRZ7 120 aa9.79□□□□□ -0.84
TPM1-206ENST00000358278 IGKV2-24A0A0C4DH68 120 aa9.78□□□□□ -0.84
TPM1-206ENST00000358278 HERV-K104P63124 156 aa9.78□□□□□ -0.84
TPM1-206ENST00000358278 GAGE2BQ13066 116 aa9.78□□□□□ -0.84
TPM1-206ENST00000358278 PYY3Q5JQD4 70 aa9.78□□□□□ -0.84
TPM1-206ENST00000358278 A0A096LNI7 61 aa9.77□□□□□ -0.85
TPM1-206ENST00000358278 NDUFC2-KCTD14E9PQ53 114 aa9.77□□□□□ -0.85
TPM1-206ENST00000358278 TLX1NBP0CAT3 122 aa9.77□□□□□ -0.85
TPM1-206ENST00000358278 ERG28Q9UKR5 140 aa9.77□□□□□ -0.85
TPM1-206ENST00000358278 CHTF8P0CG12 524 aa9.76□□□□□ -0.85
TPM1-206ENST00000358278 PFN2P35080 140 aa9.76□□□□□ -0.85
TPM1-206ENST00000358278 MEIG1Q5JSS6 88 aa9.76□□□□□ -0.85
TPM1-206ENST00000358278 ZNF815PA8K554 130 aa9.76□□□□□ -0.85
TPM1-206ENST00000358278 PTTG1IPP53801 180 aa9.76□□□□□ -0.85
TPM1-206ENST00000358278 GAGE2EQ4V326 116 aa9.76□□□□□ -0.85
TPM1-206ENST00000358278 Q6ZRP5 223 aa9.76□□□□□ -0.85
TPM1-206ENST00000358278 LINC00474Q9P2X8 69 aa9.76□□□□□ -0.85
TPM1-206ENST00000358278 GAGE2DQ9UEU5 116 aa9.76□□□□□ -0.85
TPM1-206ENST00000358278 COX17Q14061 63 aa9.75□□□□□ -0.85
TPM1-206ENST00000358278 VAMP8Q9BV40 100 aa9.75□□□□□ -0.85
TPM1-206ENST00000358278 TTTY13Q9BZ97 58 aa9.75□□□□□ -0.85
TPM1-206ENST00000358278 DPH3Q96FX2 82 aa9.74□□□□□ -0.85
TPM1-206ENST00000358278 FAM30AQ9NZY2 134 aa9.74□□□□□ -0.85
TPM1-206ENST00000358278 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.74□□□□□ -0.85
TPM1-206ENST00000358278 LINC00587B1AMM8 73 aa9.73□□□□□ -0.85
TPM1-206ENST00000358278 Q6ZSA8 131 aa9.73□□□□□ -0.85
TPM1-206ENST00000358278 A0A0U1RRA0 63 aa9.73□□□□□ -0.85
TPM1-206ENST00000358278 LINC00158P58513 81 aa9.73□□□□□ -0.85
TPM1-206ENST00000358278 SPACA4Q8TDM5 124 aa9.73□□□□□ -0.85
TPM1-206ENST00000358278 PAM16Q9Y3D7 125 aa9.73□□□□□ -0.85
TPM1-206ENST00000358278 PANO1I0J062 215 aa9.72□□□□□ -0.85
TPM1-206ENST00000358278 SMIM13P0DJ93 91 aa9.72□□□□□ -0.85
TPM1-206ENST00000358278 PCP2Q8IVA1 136 aa9.72□□□□□ -0.85
TPM1-206ENST00000358278 DNAH8Q96JB1 4490 aa9.71□□□□□ -0.85
TPM1-206ENST00000358278 A0A0J9YXY3 114 aa9.71□□□□□ -0.85
TPM1-206ENST00000358278 SPATA45Q537H7 98 aa9.71□□□□□ -0.85
TPM1-206ENST00000358278 J3QL48 77 aa9.7□□□□□ -0.86
TPM1-206ENST00000358278 CIRBPQ14011 172 aaKnown RBP9.7□□□□□ -0.86
TPM1-206ENST00000358278 SCGB1D4Q6XE38 83 aa9.7□□□□□ -0.86
TPM1-206ENST00000358278 XAGE1AQ9HD64 81 aa9.7□□□□□ -0.86
TPM1-206ENST00000358278 HAMPP81172 84 aa9.7□□□□□ -0.86
TPM1-206ENST00000358278 LINC00518Q8N0U6 118 aa9.7□□□□□ -0.86
TPM1-206ENST00000358278 APOBP04114 4563 aaKnown RBP9.69□□□□□ -0.86
TPM1-206ENST00000358278 SMIM6P0DI80 62 aa9.68□□□□□ -0.86
TPM1-206ENST00000358278 SCXQ7RTU7 201 aa9.68□□□□□ -0.86
TPM1-206ENST00000358278 A0A087WYN8 130 aa9.68□□□□□ -0.86
TPM1-206ENST00000358278 C9orf129Q5T035 196 aaKnown RBP9.68□□□□□ -0.86
TPM1-206ENST00000358278 MIR7-3HGQ8N6C7 128 aa9.68□□□□□ -0.86
TPM1-206ENST00000358278 SND1-IT1Q9HBX3 110 aa9.68□□□□□ -0.86
TPM1-206ENST00000358278 CDK2AP2O75956 126 aa9.67□□□□□ -0.86
TPM1-206ENST00000358278 S100A12P80511 92 aa9.67□□□□□ -0.86
TPM1-206ENST00000358278 DAND5Q8N907 189 aa9.67□□□□□ -0.86
TPM1-206ENST00000358278 CIRBP-AS1Q8TBR5 109 aa9.67□□□□□ -0.86
TPM1-206ENST00000358278 COX8AP10176 69 aa9.66□□□□□ -0.86
TPM1-206ENST00000358278 FAM168BA1KXE4 195 aa9.65□□□□□ -0.86
TPM1-206ENST00000358278 FAM19A5Q7Z5A7 132 aaPredicted RBP9.65□□□□□ -0.86
TPM1-206ENST00000358278 C12orf57Q99622 126 aa9.65□□□□□ -0.86
TPM1-206ENST00000358278 TIMM17BO60830 172 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms