RNA–Protein interactions for RNA: ENST00000357365.7

SDCCAG3-202, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SDCCAG3, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-202ENST00000357365 RPL13AP40429 203 aaKnown RBP19.44■□□□□ 0.7
SDCCAG3-202ENST00000357365 LYRM7Q5U5X0 104 aa19.44■□□□□ 0.7
SDCCAG3-202ENST00000357365 HUWE1Q7Z6Z7 4374 aaKnown RBP19.44■□□□□ 0.7
SDCCAG3-202ENST00000357365 SMCPP49901 116 aaPredicted RBP19.43■□□□□ 0.7
SDCCAG3-202ENST00000357365 PFN2P35080 140 aa19.42■□□□□ 0.7
SDCCAG3-202ENST00000357365 RNF151Q2KHN1 245 aa19.42■□□□□ 0.7
SDCCAG3-202ENST00000357365 LINC00158P58513 81 aa19.42■□□□□ 0.7
SDCCAG3-202ENST00000357365 ETDBQ3ZM63 59 aa19.41■□□□□ 0.7
SDCCAG3-202ENST00000357365 C11orf45Q8TAV5 145 aa19.41■□□□□ 0.7
SDCCAG3-202ENST00000357365 MRAPQ8TCY5 172 aa19.41■□□□□ 0.7
SDCCAG3-202ENST00000357365 K7EIL1 84 aa19.41■□□□□ 0.7
SDCCAG3-202ENST00000357365 COX7A2LO14548 114 aa19.41■□□□□ 0.7
SDCCAG3-202ENST00000357365 WFDC10BQ8IUB3 73 aa19.41■□□□□ 0.7
SDCCAG3-202ENST00000357365 TRBV20-1A0A075B6N2 111 aa19.4■□□□□ 0.7
SDCCAG3-202ENST00000357365 FOXI1Q12951 378 aa19.4■□□□□ 0.7
SDCCAG3-202ENST00000357365 TRBV30A0A0K0K1B3 111 aa19.39■□□□□ 0.69
SDCCAG3-202ENST00000357365 Q8IZM0 81 aa19.39■□□□□ 0.69
SDCCAG3-202ENST00000357365 H3BNG1 76 aa19.39■□□□□ 0.69
SDCCAG3-202ENST00000357365 ENHOQ6UWT2 76 aa19.38■□□□□ 0.69
SDCCAG3-202ENST00000357365 DEFB131BA0A096LNP1 70 aa19.37■□□□□ 0.69
SDCCAG3-202ENST00000357365 KIAA0087Q14695 138 aa19.37■□□□□ 0.69
SDCCAG3-202ENST00000357365 PRR34Q9NV39 138 aa19.37■□□□□ 0.69
SDCCAG3-202ENST00000357365 DEFB121Q5J5C9 76 aa19.36■□□□□ 0.69
SDCCAG3-202ENST00000357365 IBA57-AS1B1ANH7 110 aa19.36■□□□□ 0.69
SDCCAG3-202ENST00000357365 K7ERU9 68 aa19.36■□□□□ 0.69
SDCCAG3-202ENST00000357365 GAGE12HA6NDE8 117 aa19.35■□□□□ 0.69
SDCCAG3-202ENST00000357365 MALP21145 153 aa19.35■□□□□ 0.69
SDCCAG3-202ENST00000357365 LINC01561Q8N1V8 128 aa19.35■□□□□ 0.69
SDCCAG3-202ENST00000357365 ESRGQ1W209 222 aa19.35■□□□□ 0.69
SDCCAG3-202ENST00000357365 COPS9Q8WXC6 57 aa19.35■□□□□ 0.69
SDCCAG3-202ENST00000357365 MDFIQ99750 246 aa19.33■□□□□ 0.69
SDCCAG3-202ENST00000357365 CCL18P55774 89 aa19.32■□□□□ 0.68
SDCCAG3-202ENST00000357365 UBE2WQ96B02 151 aa19.31■□□□□ 0.68
SDCCAG3-202ENST00000357365 CKS1BP61024 79 aa19.31■□□□□ 0.68
SDCCAG3-202ENST00000357365 CLEC2BQ92478 149 aa19.31■□□□□ 0.68
SDCCAG3-202ENST00000357365 SND1-IT1Q9HBX3 110 aa19.31■□□□□ 0.68
SDCCAG3-202ENST00000357365 LINC00526Q96FQ7 95 aa19.3■□□□□ 0.68
SDCCAG3-202ENST00000357365 SPATA25Q9BR10 227 aa19.3■□□□□ 0.68
SDCCAG3-202ENST00000357365 TM2D3Q9BRN9 247 aa19.3■□□□□ 0.68
SDCCAG3-202ENST00000357365 IGKV2-28A0A075B6P5 120 aa19.29■□□□□ 0.68
SDCCAG3-202ENST00000357365 IGKV2D-28P01615 120 aa19.29■□□□□ 0.68
SDCCAG3-202ENST00000357365 C9JAW5 83 aa19.28■□□□□ 0.68
SDCCAG3-202ENST00000357365 C9orf116Q5BN46 136 aaPredicted RBP19.28■□□□□ 0.68
SDCCAG3-202ENST00000357365 C6orf223Q8N319 242 aa19.28■□□□□ 0.68
SDCCAG3-202ENST00000357365 CFAP161Q6P656 301 aa19.27■□□□□ 0.68
SDCCAG3-202ENST00000357365 LINC00337Q8N6G1 96 aa19.27■□□□□ 0.68
SDCCAG3-202ENST00000357365 PPDPFQ9H3Y8 114 aa19.26■□□□□ 0.67
SDCCAG3-202ENST00000357365 ATXN8Q156A1 80 aa19.26■□□□□ 0.67
SDCCAG3-202ENST00000357365 CRPP02741 224 aa19.25■□□□□ 0.67
SDCCAG3-202ENST00000357365 COX6CP09669 75 aa19.24■□□□□ 0.67
SDCCAG3-202ENST00000357365 LINC01620Q4KN68 170 aa19.23■□□□□ 0.67
SDCCAG3-202ENST00000357365 VPS25Q9BRG1 176 aa19.23■□□□□ 0.67
SDCCAG3-202ENST00000357365 C10orf25Q5T742 122 aa19.23■□□□□ 0.67
SDCCAG3-202ENST00000357365 COL7A1Q02388 2944 aa19.23■□□□□ 0.67
SDCCAG3-202ENST00000357365 SLC25A20O43772 301 aa19.22■□□□□ 0.67
SDCCAG3-202ENST00000357365 SPAG11BQ08648 103 aa19.21■□□□□ 0.67
SDCCAG3-202ENST00000357365 KLK5Q9Y337 293 aaPredicted RBP19.2■□□□□ 0.66
SDCCAG3-202ENST00000357365 UNQ6190/PRO20217Q6UXQ8 127 aa19.2■□□□□ 0.66
SDCCAG3-202ENST00000357365 CXCL5P42830 114 aa19.18■□□□□ 0.66
SDCCAG3-202ENST00000357365 STAB2Q8WWQ8 2551 aa19.17■□□□□ 0.66
SDCCAG3-202ENST00000357365 TRAV13-2A0A0B4J235 113 aa19.17■□□□□ 0.66
SDCCAG3-202ENST00000357365 LST1O00453 97 aa19.17■□□□□ 0.66
SDCCAG3-202ENST00000357365 ANKRD29Q8N6D5 301 aa19.17■□□□□ 0.66
SDCCAG3-202ENST00000357365 TRAV8-4A0A0B4J246 113 aa19.15■□□□□ 0.66
SDCCAG3-202ENST00000357365 KRTAP26-1Q6PEX3 210 aa19.15■□□□□ 0.66
SDCCAG3-202ENST00000357365 DNAH9Q9NYC9 4486 aa19.15■□□□□ 0.66
SDCCAG3-202ENST00000357365 TRAV10A0A0B4J240 114 aa19.14■□□□□ 0.66
SDCCAG3-202ENST00000357365 TEN1Q86WV5 123 aa19.14■□□□□ 0.66
SDCCAG3-202ENST00000357365 CARD19Q96LW7 228 aa19.14■□□□□ 0.66
SDCCAG3-202ENST00000357365 PRR3P79522 188 aaKnown RBP19.13■□□□□ 0.65
SDCCAG3-202ENST00000357365 TRBV10-2A0A0K0K1G8 114 aa19.11■□□□□ 0.65
SDCCAG3-202ENST00000357365 COX17Q14061 63 aa19.1■□□□□ 0.65
SDCCAG3-202ENST00000357365 LINC01556Q5JQF7 62 aa19.1■□□□□ 0.65
SDCCAG3-202ENST00000357365 SMIM11BQ8TCY0 68 aa19.09■□□□□ 0.65
SDCCAG3-202ENST00000357365 HIGD2BQ4VC39 106 aa19.09■□□□□ 0.65
SDCCAG3-202ENST00000357365 FAM218AQ96MZ4 157 aa19.09■□□□□ 0.65
SDCCAG3-202ENST00000357365 Q8NDZ9 215 aa19.08■□□□□ 0.65
SDCCAG3-202ENST00000357365 RPL28P46779 137 aaKnown RBP19.08■□□□□ 0.64
SDCCAG3-202ENST00000357365 OR13C6PQ8NH95 151 aa19.07■□□□□ 0.64
SDCCAG3-202ENST00000357365 CBY1Q9Y3M2 126 aa19.07■□□□□ 0.64
SDCCAG3-202ENST00000357365 LINC00588Q9Y4M8 146 aa19.07■□□□□ 0.64
SDCCAG3-202ENST00000357365 NTN5Q8WTR8 489 aaPredicted RBP19.06■□□□□ 0.64
SDCCAG3-202ENST00000357365 LYSTQ99698 3801 aa19.06■□□□□ 0.64
SDCCAG3-202ENST00000357365 PPDPFLQ8WWR9 84 aa19.05■□□□□ 0.64
SDCCAG3-202ENST00000357365 J3QR89 54 aa19.03■□□□□ 0.64
SDCCAG3-202ENST00000357365 M0QXV9 152 aa19.03■□□□□ 0.64
SDCCAG3-202ENST00000357365 C6orf48Q9UBA6 75 aa19.03■□□□□ 0.64
SDCCAG3-202ENST00000357365 C15orf53Q8NAA6 179 aa19.03■□□□□ 0.64
SDCCAG3-202ENST00000357365 Q9HAA7 133 aa19.02■□□□□ 0.64
SDCCAG3-202ENST00000357365 IGKV2D-24A0A075B6R9 120 aa19.02■□□□□ 0.64
SDCCAG3-202ENST00000357365 C15orf56Q8N910 161 aa19.02■□□□□ 0.64
SDCCAG3-202ENST00000357365 DNAH10OSP0CZ25 163 aa19.01■□□□□ 0.63
SDCCAG3-202ENST00000357365 C1orf43Q9BWL3 253 aa19.01■□□□□ 0.63
SDCCAG3-202ENST00000357365 TEX49A0A1B0GTD5 131 aa18.99■□□□□ 0.63
SDCCAG3-202ENST00000357365 LINC01600Q96MT4 127 aa18.99■□□□□ 0.63
SDCCAG3-202ENST00000357365 DNAH1Q9P2D7 4330 aa18.99■□□□□ 0.63
SDCCAG3-202ENST00000357365 ZNF561-AS1K7EIQ3 104 aa18.98■□□□□ 0.63
SDCCAG3-202ENST00000357365 NCR3O14931 201 aa18.97■□□□□ 0.63
SDCCAG3-202ENST00000357365 H3BT86 120 aa18.96■□□□□ 0.63
SDCCAG3-202ENST00000357365 NDUFC2O95298 119 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms