RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 C11orf71Q6IPW1 123 aa4.2□□□□□ -1.74
SRGAP1-201ENST00000355086 C1orf229Q6ZS94 237 aaPredicted RBP4.2□□□□□ -1.74
SRGAP1-201ENST00000355086 C7orf65Q6ZTY9 151 aa4.2□□□□□ -1.74
SRGAP1-201ENST00000355086 IGF2RP11717 2491 aa4.2□□□□□ -1.74
SRGAP1-201ENST00000355086 USP9XQ93008 2570 aaPredicted RBP4.2□□□□□ -1.74
SRGAP1-201ENST00000355086 TRBV10-3A0A0K0K1G6 114 aa4.2□□□□□ -1.74
SRGAP1-201ENST00000355086 EGFEM1PQ0D2K5 195 aa4.2□□□□□ -1.74
SRGAP1-201ENST00000355086 LIMD2Q9BT23 127 aa4.2□□□□□ -1.74
SRGAP1-201ENST00000355086 PRR9Q5T870 116 aa4.2□□□□□ -1.74
SRGAP1-201ENST00000355086 CSDC2Q9Y534 153 aaKnown RBP4.2□□□□□ -1.74
SRGAP1-201ENST00000355086 KLLNB2CW77 178 aa4.19□□□□□ -1.74
SRGAP1-201ENST00000355086 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
SRGAP1-201ENST00000355086 IGKV2-30P06310 120 aa4.19□□□□□ -1.74
SRGAP1-201ENST00000355086 HCG22E2RYF7 251 aa4.19□□□□□ -1.74
SRGAP1-201ENST00000355086 BRWD1-AS2P59051 145 aa4.19□□□□□ -1.74
SRGAP1-201ENST00000355086 EIF4EBP1Q13541 118 aaPredicted RBP4.19□□□□□ -1.74
SRGAP1-201ENST00000355086 CHCHD7Q9BUK0 85 aa4.19□□□□□ -1.74
SRGAP1-201ENST00000355086 POLR2KP53803 58 aaKnown RBP4.19□□□□□ -1.74
SRGAP1-201ENST00000355086 MTORP42345 2549 aa4.19□□□□□ -1.74
SRGAP1-201ENST00000355086 BRI3O95415 125 aa4.18□□□□□ -1.74
SRGAP1-201ENST00000355086 C2orf91Q6ZV80 131 aa4.18□□□□□ -1.74
SRGAP1-201ENST00000355086 PRLHP81277 87 aa4.18□□□□□ -1.74
SRGAP1-201ENST00000355086 CRIP2P52943 208 aaPredicted RBP4.18□□□□□ -1.74
SRGAP1-201ENST00000355086 PLA2G2AP14555 144 aa4.18□□□□□ -1.74
SRGAP1-201ENST00000355086 PTPRBP23467 1997 aa4.18□□□□□ -1.74
SRGAP1-201ENST00000355086 PRR3P79522 188 aaKnown RBP4.18□□□□□ -1.74
SRGAP1-201ENST00000355086 A0A087WSZ3 146 aa4.18□□□□□ -1.74
SRGAP1-201ENST00000355086 DEFB116Q30KQ4 102 aa4.18□□□□□ -1.74
SRGAP1-201ENST00000355086 C1orf134Q5TEV5 83 aa4.18□□□□□ -1.74
SRGAP1-201ENST00000355086 COX6A2Q02221 97 aa4.18□□□□□ -1.74
SRGAP1-201ENST00000355086 A0A087WYN8 130 aa4.18□□□□□ -1.74
SRGAP1-201ENST00000355086 PTPRSQ13332 1948 aa4.18□□□□□ -1.74
SRGAP1-201ENST00000355086 XGP55808 180 aa4.17□□□□□ -1.74
SRGAP1-201ENST00000355086 Q8N3U1 123 aa4.17□□□□□ -1.74
SRGAP1-201ENST00000355086 LINC00242Q5T6M2 205 aa4.17□□□□□ -1.74
SRGAP1-201ENST00000355086 LINC00575Q6W349 94 aa4.17□□□□□ -1.74
SRGAP1-201ENST00000355086 Q6ZTC4 211 aa4.17□□□□□ -1.74
SRGAP1-201ENST00000355086 hDV103S1A0JD37 113 aa4.17□□□□□ -1.74
SRGAP1-201ENST00000355086 C11orf21Q9P2W6 132 aa4.16□□□□□ -1.74
SRGAP1-201ENST00000355086 A0A087WVE0 104 aa4.16□□□□□ -1.74
SRGAP1-201ENST00000355086 IGLV1-40P01703 118 aa4.16□□□□□ -1.74
SRGAP1-201ENST00000355086 IGLV4-60A0A075B6I1 120 aa4.16□□□□□ -1.74
SRGAP1-201ENST00000355086 IGIPA6NJ69 53 aa4.16□□□□□ -1.74
SRGAP1-201ENST00000355086 LRP4O75096 1905 aa4.15□□□□□ -1.74
SRGAP1-201ENST00000355086 SERTAD4-AS1Q5TG53 156 aa4.15□□□□□ -1.74
SRGAP1-201ENST00000355086 SMR3AQ99954 134 aa4.15□□□□□ -1.74
SRGAP1-201ENST00000355086 F8WDY8 70 aa4.15□□□□□ -1.74
SRGAP1-201ENST00000355086 SPAG11AQ6PDA7 123 aa4.15□□□□□ -1.74
SRGAP1-201ENST00000355086 ZNF295-AS1Q8N0V1 137 aa4.15□□□□□ -1.74
SRGAP1-201ENST00000355086 SMIM1B2RUZ4 78 aa4.15□□□□□ -1.75
SRGAP1-201ENST00000355086 GAS8-AS1O95177 125 aa4.15□□□□□ -1.75
SRGAP1-201ENST00000355086 A0A1B0GU69 56 aa4.15□□□□□ -1.75
SRGAP1-201ENST00000355086 C1orf64Q8NEQ6 169 aa4.15□□□□□ -1.75
SRGAP1-201ENST00000355086 Q9UF83 564 aa4.14□□□□□ -1.75
SRGAP1-201ENST00000355086 ACYP2P14621 99 aa4.14□□□□□ -1.75
SRGAP1-201ENST00000355086 Q6ZPA2 131 aa4.14□□□□□ -1.75
SRGAP1-201ENST00000355086 Q8N6K4 173 aa4.14□□□□□ -1.75
SRGAP1-201ENST00000355086 USP9YO00507 2555 aaPredicted RBP4.14□□□□□ -1.75
SRGAP1-201ENST00000355086 FLG2Q5D862 2391 aaPredicted RBP4.13□□□□□ -1.75
SRGAP1-201ENST00000355086 TMEM254Q8TBM7 123 aa4.13□□□□□ -1.75
SRGAP1-201ENST00000355086 ADAMTS20P59510 1910 aa4.13□□□□□ -1.75
SRGAP1-201ENST00000355086 ODF3L2Q3SX64 289 aa4.13□□□□□ -1.75
SRGAP1-201ENST00000355086 CNFNQ9BYD5 112 aa4.13□□□□□ -1.75
SRGAP1-201ENST00000355086 CHD8Q9HCK8 2581 aa4.13□□□□□ -1.75
SRGAP1-201ENST00000355086 POLQO75417 2590 aa4.12□□□□□ -1.75
SRGAP1-201ENST00000355086 SPINT4Q6UDR6 99 aa4.12□□□□□ -1.75
SRGAP1-201ENST00000355086 EDN2P20800 178 aa4.12□□□□□ -1.75
SRGAP1-201ENST00000355086 Q8N2B8 174 aa4.12□□□□□ -1.75
SRGAP1-201ENST00000355086 SPACA4Q8TDM5 124 aa4.12□□□□□ -1.75
SRGAP1-201ENST00000355086 FHL2Q14192 279 aa4.12□□□□□ -1.75
SRGAP1-201ENST00000355086 A8MTW9 85 aa4.12□□□□□ -1.75
SRGAP1-201ENST00000355086 NHLRC4P0CG21 123 aaPredicted RBP4.12□□□□□ -1.75
SRGAP1-201ENST00000355086 MOBPQ13875 183 aa4.12□□□□□ -1.75
SRGAP1-201ENST00000355086 CXCL6P80162 114 aa4.11□□□□□ -1.75
SRGAP1-201ENST00000355086 IGLV1-51P01701 117 aa4.11□□□□□ -1.75
SRGAP1-201ENST00000355086 SMCR5Q8TEV8 140 aa4.11□□□□□ -1.75
SRGAP1-201ENST00000355086 C22orf24Q9Y442 160 aa4.11□□□□□ -1.75
SRGAP1-201ENST00000355086 LINC01561Q8N1V8 128 aa4.11□□□□□ -1.75
SRGAP1-201ENST00000355086 ADAMTSL4-AS1Q5T5F5 129 aa4.11□□□□□ -1.75
SRGAP1-201ENST00000355086 SPTBN4Q9H254 2564 aa4.11□□□□□ -1.75
SRGAP1-201ENST00000355086 A0A1B0GUV1 79 aa4.11□□□□□ -1.75
SRGAP1-201ENST00000355086 Q6ZRU5 148 aa4.1□□□□□ -1.75
SRGAP1-201ENST00000355086 TSPEAR-AS2P59090 65 aa4.1□□□□□ -1.75
SRGAP1-201ENST00000355086 LYPD5Q6UWN5 251 aa4.1□□□□□ -1.75
SRGAP1-201ENST00000355086 C6orf48Q9UBA6 75 aa4.1□□□□□ -1.75
SRGAP1-201ENST00000355086 CRIP3Q6Q6R5 217 aa4.1□□□□□ -1.75
SRGAP1-201ENST00000355086 TP53AIP1Q9HCN2 124 aa4.1□□□□□ -1.75
SRGAP1-201ENST00000355086 AMELXQ99217 191 aa4.1□□□□□ -1.75
SRGAP1-201ENST00000355086 FAM229AH3BQW9 127 aa4.1□□□□□ -1.75
SRGAP1-201ENST00000355086 USP24Q9UPU5 2620 aa4.09□□□□□ -1.75
SRGAP1-201ENST00000355086 YPEL4Q96NS1 127 aa4.09□□□□□ -1.75
SRGAP1-201ENST00000355086 ZNF580Q9UK33 172 aa4.09□□□□□ -1.75
SRGAP1-201ENST00000355086 SMIM29Q86T20 159 aa4.09□□□□□ -1.75
SRGAP1-201ENST00000355086 IGLV8-61A0A075B6I0 122 aa4.09□□□□□ -1.75
SRGAP1-201ENST00000355086 LINC00846Q9NV44 126 aa4.09□□□□□ -1.75
SRGAP1-201ENST00000355086 ANKRD11Q6UB99 2663 aaPredicted RBP4.09□□□□□ -1.76
SRGAP1-201ENST00000355086 FHL3Q13643 280 aa4.08□□□□□ -1.76
SRGAP1-201ENST00000355086 COL4A3Q01955 1670 aa4.08□□□□□ -1.76
SRGAP1-201ENST00000355086 CPAMD8Q8IZJ3 1885 aa4.08□□□□□ -1.76
SRGAP1-201ENST00000355086 FASNP49327 2511 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms