RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 C2orf82Q6UX34 121 aa13.22□□□□□ -0.29
SIGMAR1-202ENST00000353468 ZNF625Q96I27 306 aaPredicted RBP13.22□□□□□ -0.29
SIGMAR1-202ENST00000353468 DLEU1O43261 78 aa13.21□□□□□ -0.29
SIGMAR1-202ENST00000353468 TP73-AS1Q9UF72 201 aa13.21□□□□□ -0.29
SIGMAR1-202ENST00000353468 DNAH2Q9P225 4427 aa13.21□□□□□ -0.29
SIGMAR1-202ENST00000353468 C2orf48Q96LS8 159 aa13.2□□□□□ -0.3
SIGMAR1-202ENST00000353468 SFTA2Q6UW10 78 aa13.2□□□□□ -0.3
SIGMAR1-202ENST00000353468 UQCR10Q9UDW1 63 aa13.2□□□□□ -0.3
SIGMAR1-202ENST00000353468 TSTD3H0UI37 97 aa13.19□□□□□ -0.3
SIGMAR1-202ENST00000353468 HERV-K104P63124 156 aa13.19□□□□□ -0.3
SIGMAR1-202ENST00000353468 C14orf177Q52M58 125 aa13.19□□□□□ -0.3
SIGMAR1-202ENST00000353468 F8WDY8 70 aa13.18□□□□□ -0.3
SIGMAR1-202ENST00000353468 UNQ6190/PRO20217Q6UXQ8 127 aa13.18□□□□□ -0.3
SIGMAR1-202ENST00000353468 CAMK2N2Q96S95 79 aa13.18□□□□□ -0.3
SIGMAR1-202ENST00000353468 MIEN1Q9BRT3 115 aa13.17□□□□□ -0.3
SIGMAR1-202ENST00000353468 A0A0J9YXY3 114 aa13.16□□□□□ -0.3
SIGMAR1-202ENST00000353468 C10orf25Q5T742 122 aa13.16□□□□□ -0.3
SIGMAR1-202ENST00000353468 SCGB1D4Q6XE38 83 aa13.16□□□□□ -0.3
SIGMAR1-202ENST00000353468 A0A087WTM6 91 aa13.15□□□□□ -0.3
SIGMAR1-202ENST00000353468 RTL8CO15255 209 aa13.15□□□□□ -0.3
SIGMAR1-202ENST00000353468 Q6ZRU5 148 aa13.15□□□□□ -0.3
SIGMAR1-202ENST00000353468 DNAH17Q9UFH2 4485 aa13.14□□□□□ -0.31
SIGMAR1-202ENST00000353468 SLPIP03973 132 aa13.14□□□□□ -0.31
SIGMAR1-202ENST00000353468 SYCNQ0VAF6 134 aa13.14□□□□□ -0.31
SIGMAR1-202ENST00000353468 MEIG1Q5JSS6 88 aa13.13□□□□□ -0.31
SIGMAR1-202ENST00000353468 C2orf91Q6ZV80 131 aa13.12□□□□□ -0.31
SIGMAR1-202ENST00000353468 C6orf48Q9UBA6 75 aa13.12□□□□□ -0.31
SIGMAR1-202ENST00000353468 TRBV30A0A0K0K1B3 111 aa13.11□□□□□ -0.31
SIGMAR1-202ENST00000353468 TNP2Q05952 138 aa13.11□□□□□ -0.31
SIGMAR1-202ENST00000353468 Q8N814 137 aa13.11□□□□□ -0.31
SIGMAR1-202ENST00000353468 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.11□□□□□ -0.31
SIGMAR1-202ENST00000353468 LINC00587B1AMM8 73 aa13.11□□□□□ -0.31
SIGMAR1-202ENST00000353468 C9orf116Q5BN46 136 aaPredicted RBP13.11□□□□□ -0.31
SIGMAR1-202ENST00000353468 CARD19Q96LW7 228 aa13.11□□□□□ -0.31
SIGMAR1-202ENST00000353468 ERG28Q9UKR5 140 aa13.11□□□□□ -0.31
SIGMAR1-202ENST00000353468 CIRBPQ14011 172 aaKnown RBP13.1□□□□□ -0.31
SIGMAR1-202ENST00000353468 HIGD1BQ9P298 99 aa13.1□□□□□ -0.31
SIGMAR1-202ENST00000353468 KMT2CQ8NEZ4 4911 aaKnown RBP13.09□□□□□ -0.31
SIGMAR1-202ENST00000353468 FRAS1Q86XX4 4008 aa13.09□□□□□ -0.31
SIGMAR1-202ENST00000353468 A0A0U1RRA0 63 aa13.09□□□□□ -0.31
SIGMAR1-202ENST00000353468 TIMM17BO60830 172 aa13.09□□□□□ -0.31
SIGMAR1-202ENST00000353468 SMIM13P0DJ93 91 aa13.09□□□□□ -0.31
SIGMAR1-202ENST00000353468 HNRNPA3P51991 378 aaKnown RBP13.09□□□□□ -0.31
SIGMAR1-202ENST00000353468 CNBPP62633 177 aaKnown RBP13.09□□□□□ -0.31
SIGMAR1-202ENST00000353468 PFN2P35080 140 aa13.08□□□□□ -0.32
SIGMAR1-202ENST00000353468 LITAFQ99732 161 aa13.08□□□□□ -0.32
SIGMAR1-202ENST00000353468 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.07□□□□□ -0.32
SIGMAR1-202ENST00000353468 TMEM238C9JI98 176 aa13.07□□□□□ -0.32
SIGMAR1-202ENST00000353468 LINC00158P58513 81 aa13.07□□□□□ -0.32
SIGMAR1-202ENST00000353468 RNF151Q2KHN1 245 aa13.07□□□□□ -0.32
SIGMAR1-202ENST00000353468 RYR2Q92736 4967 aa13.07□□□□□ -0.32
SIGMAR1-202ENST00000353468 EREGO14944 169 aa13.07□□□□□ -0.32
SIGMAR1-202ENST00000353468 COX17Q14061 63 aa13.07□□□□□ -0.32
SIGMAR1-202ENST00000353468 ADAMTSL4-AS1Q5T5F5 129 aa13.07□□□□□ -0.32
SIGMAR1-202ENST00000353468 DDTP30046 118 aa13.05□□□□□ -0.32
SIGMAR1-202ENST00000353468 SPANXB1Q9NS25 103 aaPredicted RBP13.05□□□□□ -0.32
SIGMAR1-202ENST00000353468 SRSF9Q13242 221 aaKnown RBP eCLIP13.03□□□□□ -0.32
SIGMAR1-202ENST00000353468 MIR7-3HGQ8N6C7 128 aa13.03□□□□□ -0.32
SIGMAR1-202ENST00000353468 DAND5Q8N907 189 aa13.03□□□□□ -0.32
SIGMAR1-202ENST00000353468 PCP4L1A6NKN8 68 aa13.03□□□□□ -0.32
SIGMAR1-202ENST00000353468 HIST1H4GQ99525 98 aa13.03□□□□□ -0.32
SIGMAR1-202ENST00000353468 SPANXDQ9BXN6 97 aa13.03□□□□□ -0.32
SIGMAR1-202ENST00000353468 SPANXCQ9NY87 97 aa13.03□□□□□ -0.32
SIGMAR1-202ENST00000353468 NDUFC2-KCTD14E9PQ53 114 aa13.01□□□□□ -0.33
SIGMAR1-202ENST00000353468 CTAG1AP78358 180 aa13.01□□□□□ -0.33
SIGMAR1-202ENST00000353468 Q6ZVH6 145 aa13.01□□□□□ -0.33
SIGMAR1-202ENST00000353468 C9orf163Q8N9P6 203 aa13.01□□□□□ -0.33
SIGMAR1-202ENST00000353468 TLX1NBP0CAT3 122 aa13□□□□□ -0.33
SIGMAR1-202ENST00000353468 LINC00336Q6ZUF6 198 aa13□□□□□ -0.33
SIGMAR1-202ENST00000353468 TAL2Q16559 108 aa12.99□□□□□ -0.33
SIGMAR1-202ENST00000353468 NPC2P61916 151 aa12.98□□□□□ -0.33
SIGMAR1-202ENST00000353468 HSD52Q0P140 79 aa12.98□□□□□ -0.33
SIGMAR1-202ENST00000353468 FAT2Q9NYQ8 4349 aa12.98□□□□□ -0.33
SIGMAR1-202ENST00000353468 LOC107984640A0A0U1RRK4 108 aa12.98□□□□□ -0.33
SIGMAR1-202ENST00000353468 FUSP35637 526 aaKnown RBP eCLIP12.98□□□□□ -0.33
SIGMAR1-202ENST00000353468 Q6ZRP5 223 aa12.98□□□□□ -0.33
SIGMAR1-202ENST00000353468 RPL18AQ02543 176 aaKnown RBP12.97□□□□□ -0.33
SIGMAR1-202ENST00000353468 MUSTN1Q8IVN3 82 aa12.97□□□□□ -0.33
SIGMAR1-202ENST00000353468 LINC00308Q8TCZ7 52 aa12.97□□□□□ -0.33
SIGMAR1-202ENST00000353468 SND1-IT1Q9HBX3 110 aa12.97□□□□□ -0.33
SIGMAR1-202ENST00000353468 IFITM1P13164 125 aa12.96□□□□□ -0.33
SIGMAR1-202ENST00000353468 GAGE2EQ4V326 116 aa12.96□□□□□ -0.33
SIGMAR1-202ENST00000353468 GAGE2DQ9UEU5 116 aa12.96□□□□□ -0.33
SIGMAR1-202ENST00000353468 IGLV5-52A0A0A0MRZ9 124 aa12.95□□□□□ -0.34
SIGMAR1-202ENST00000353468 EIF4EBP3O60516 100 aaPredicted RBP12.95□□□□□ -0.34
SIGMAR1-202ENST00000353468 GCSHP23434 173 aa12.95□□□□□ -0.34
SIGMAR1-202ENST00000353468 PTTG1IPP53801 180 aa12.95□□□□□ -0.34
SIGMAR1-202ENST00000353468 SOSTDC1Q6X4U4 206 aa12.95□□□□□ -0.34
SIGMAR1-202ENST00000353468 CEND1Q8N111 149 aa12.95□□□□□ -0.34
SIGMAR1-202ENST00000353468 DNAH11Q96DT5 4516 aa12.95□□□□□ -0.34
SIGMAR1-202ENST00000353468 LINC01620Q4KN68 170 aa12.94□□□□□ -0.34
SIGMAR1-202ENST00000353468 KRTAP10-2P60368 255 aa12.94□□□□□ -0.34
SIGMAR1-202ENST00000353468 COPS9Q8WXC6 57 aa12.94□□□□□ -0.34
SIGMAR1-202ENST00000353468 XAGE1AQ9HD64 81 aa12.94□□□□□ -0.34
SIGMAR1-202ENST00000353468 GAGE2BQ13066 116 aa12.93□□□□□ -0.34
SIGMAR1-202ENST00000353468 PGPEP1Q9NXJ5 209 aa12.93□□□□□ -0.34
SIGMAR1-202ENST00000353468 LOC107984156A0A0G2JMH3 177 aa12.92□□□□□ -0.34
SIGMAR1-202ENST00000353468 SDIM1Q6ZPB5 146 aa12.92□□□□□ -0.34
SIGMAR1-202ENST00000353468 ARL17AQ8IVW1 177 aa12.92□□□□□ -0.34
SIGMAR1-202ENST00000353468 PKIGQ9Y2B9 76 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms