RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 HECTD1Q9ULT8 2610 aa15.26■□□□□ 0.03
UPF3A-201ENST00000351487 OTOGQ6ZRI0 2925 aa15.26■□□□□ 0.03
UPF3A-201ENST00000351487 SNCGO76070 127 aa15.25■□□□□ 0.03
UPF3A-201ENST00000351487 PFN2P35080 140 aa15.25■□□□□ 0.03
UPF3A-201ENST00000351487 DEFB4AO15263 64 aa15.25■□□□□ 0.03
UPF3A-201ENST00000351487 CLPSL2Q6UWE3 100 aa15.25■□□□□ 0.03
UPF3A-201ENST00000351487 DAD1P61803 113 aa15.24■□□□□ 0.03
UPF3A-201ENST00000351487 NOTCH2Q04721 2471 aa15.24■□□□□ 0.03
UPF3A-201ENST00000351487 TRAV26-1A0A087WT03 109 aa15.24■□□□□ 0.03
UPF3A-201ENST00000351487 Q8NAQ8 132 aa15.24■□□□□ 0.03
UPF3A-201ENST00000351487 MIFP14174 115 aa15.23■□□□□ 0.03
UPF3A-201ENST00000351487 MRPL23Q16540 153 aaKnown RBP15.23■□□□□ 0.03
UPF3A-201ENST00000351487 SMIM11BQ8TCY0 68 aa15.23■□□□□ 0.03
UPF3A-201ENST00000351487 NBEAL2Q6ZNJ1 2754 aa15.22■□□□□ 0.03
UPF3A-201ENST00000351487 CD164L2Q6UWJ8 174 aa15.22■□□□□ 0.03
UPF3A-201ENST00000351487 C11orf68Q9H3H3 251 aaKnown RBP15.22■□□□□ 0.03
UPF3A-201ENST00000351487 ATP5G1P05496 136 aa15.21■□□□□ 0.03
UPF3A-201ENST00000351487 BAALC-AS2P0C853 105 aa15.21■□□□□ 0.03
UPF3A-201ENST00000351487 LINC00269Q8N2A0 174 aa15.21■□□□□ 0.03
UPF3A-201ENST00000351487 C15orf53Q8NAA6 179 aa15.21■□□□□ 0.03
UPF3A-201ENST00000351487 CELA1Q9UNI1 258 aa15.21■□□□□ 0.03
UPF3A-201ENST00000351487 Q6Q795 121 aa15.2■□□□□ 0.02
UPF3A-201ENST00000351487 C22orf24Q9Y442 160 aa15.2■□□□□ 0.02
UPF3A-201ENST00000351487 WIPF1O43516 503 aa15.19■□□□□ 0.02
UPF3A-201ENST00000351487 GAGE2BQ13066 116 aa15.19■□□□□ 0.02
UPF3A-201ENST00000351487 GAGE2EQ4V326 116 aa15.19■□□□□ 0.02
UPF3A-201ENST00000351487 GAGE2DQ9UEU5 116 aa15.19■□□□□ 0.02
UPF3A-201ENST00000351487 H0YGX0 51 aa15.18■□□□□ 0.02
UPF3A-201ENST00000351487 CXCL5P42830 114 aa15.18■□□□□ 0.02
UPF3A-201ENST00000351487 KIAA0087Q14695 138 aa15.18■□□□□ 0.02
UPF3A-201ENST00000351487 WFDC9Q8NEX5 89 aa15.18■□□□□ 0.02
UPF3A-201ENST00000351487 CHCHD10Q8WYQ3 142 aaPredicted RBP15.18■□□□□ 0.02
UPF3A-201ENST00000351487 REG3AQ06141 175 aa15.17■□□□□ 0.02
UPF3A-201ENST00000351487 ANGP03950 147 aaKnown RBP15.17■□□□□ 0.02
UPF3A-201ENST00000351487 ACYP1P07311 99 aa15.17■□□□□ 0.02
UPF3A-201ENST00000351487 TENM1Q9UKZ4 2725 aa15.16■□□□□ 0.02
UPF3A-201ENST00000351487 SPART-AS1P0CW21 52 aa15.16■□□□□ 0.02
UPF3A-201ENST00000351487 Q8N3U1 123 aa15.16■□□□□ 0.02
UPF3A-201ENST00000351487 COX17Q14061 63 aa15.15■□□□□ 0.02
UPF3A-201ENST00000351487 Q9HAA7 133 aa15.15■□□□□ 0.02
UPF3A-201ENST00000351487 A0A087WYN8 130 aa15.14■□□□□ 0.01
UPF3A-201ENST00000351487 MALP21145 153 aa15.13■□□□□ 0.01
UPF3A-201ENST00000351487 DNAL4O96015 105 aa15.12■□□□□ 0.01
UPF3A-201ENST00000351487 IGHV4-30-4P0DP06 118 aa15.12■□□□□ 0.01
UPF3A-201ENST00000351487 TTC32Q5I0X7 151 aa15.12■□□□□ 0.01
UPF3A-201ENST00000351487 CFAP161Q6P656 301 aa15.12■□□□□ 0.01
UPF3A-201ENST00000351487 LELP1Q5T871 98 aa15.12■□□□□ 0.01
UPF3A-201ENST00000351487 IGLV10-54A0A075B6I4 117 aa15.11■□□□□ 0.01
UPF3A-201ENST00000351487 OR13C6PQ8NH95 151 aa15.11■□□□□ 0.01
UPF3A-201ENST00000351487 INAFM2P0DMQ5 153 aa15.11■□□□□ 0.01
UPF3A-201ENST00000351487 NDUFC2O95298 119 aa15.1■□□□□ 0.01
UPF3A-201ENST00000351487 ANAPC13Q9BS18 74 aa15.1■□□□□ 0.01
UPF3A-201ENST00000351487 TEP1Q99973 2627 aaKnown RBP15.08■□□□□ 0
UPF3A-201ENST00000351487 ATRQ13535 2644 aa15.08■□□□□ 0
UPF3A-201ENST00000351487 HIVEP1P15822 2718 aa15.07■□□□□ 0
UPF3A-201ENST00000351487 TRBV7-7A0A0K0K1E9 115 aa15.07■□□□□ 0
UPF3A-201ENST00000351487 HTN3P15516 51 aa15.07■□□□□ 0
UPF3A-201ENST00000351487 NDUFV3P56181 108 aaKnown RBP15.07■□□□□ 0
UPF3A-201ENST00000351487 SDIM1Q6ZPB5 146 aa15.06■□□□□ 0
UPF3A-201ENST00000351487 PRR34Q9NV39 138 aa15.06■□□□□ 0
UPF3A-201ENST00000351487 LECT2O14960 151 aa15.05■□□□□ 0
UPF3A-201ENST00000351487 KLK5Q9Y337 293 aaPredicted RBP15.05■□□□□ 0
UPF3A-201ENST00000351487 NANOS2P60321 138 aaKnown RBP15.04■□□□□ -0
UPF3A-201ENST00000351487 NHLRC4P0CG21 123 aaPredicted RBP15.04■□□□□ -0
UPF3A-201ENST00000351487 MUC7Q8TAX7 377 aa15.02■□□□□ -0
UPF3A-201ENST00000351487 OBSCN-AS1Q96MR7 158 aa15.02■□□□□ -0
UPF3A-201ENST00000351487 SMCR5Q8TEV8 140 aa15.02□□□□□ -0.01
UPF3A-201ENST00000351487 C9orf116Q5BN46 136 aaPredicted RBP15.01□□□□□ -0.01
UPF3A-201ENST00000351487 TMEM126AQ9H061 195 aa15.01□□□□□ -0.01
UPF3A-201ENST00000351487 A0A1B0GX51 115 aa15□□□□□ -0.01
UPF3A-201ENST00000351487 SPAG11BQ08648 103 aa15□□□□□ -0.01
UPF3A-201ENST00000351487 LINC00643Q86TS7 51 aa15□□□□□ -0.01
UPF3A-201ENST00000351487 PRR3P79522 188 aaKnown RBP15□□□□□ -0.01
UPF3A-201ENST00000351487 LINC00167Q96N53 147 aa14.99□□□□□ -0.01
UPF3A-201ENST00000351487 IMUPQ9GZP8 106 aa14.99□□□□□ -0.01
UPF3A-201ENST00000351487 KLK12Q9UKR0 248 aa14.99□□□□□ -0.01
UPF3A-201ENST00000351487 C9orf129Q5T035 196 aaKnown RBP14.98□□□□□ -0.01
UPF3A-201ENST00000351487 LYPD5Q6UWN5 251 aa14.98□□□□□ -0.01
UPF3A-201ENST00000351487 A0A0J9YWU9 116 aa14.97□□□□□ -0.01
UPF3A-201ENST00000351487 ENHOQ6UWT2 76 aa14.97□□□□□ -0.01
UPF3A-201ENST00000351487 GAGE2AQ6NT46 116 aa14.97□□□□□ -0.01
UPF3A-201ENST00000351487 ORMDL1Q9P0S3 153 aa14.97□□□□□ -0.01
UPF3A-201ENST00000351487 C10orf25Q5T742 122 aa14.96□□□□□ -0.01
UPF3A-201ENST00000351487 UNQ6190/PRO20217Q6UXQ8 127 aa14.96□□□□□ -0.02
UPF3A-201ENST00000351487 C6orf223Q8N319 242 aa14.96□□□□□ -0.02
UPF3A-201ENST00000351487 Q8NDZ9 215 aa14.96□□□□□ -0.02
UPF3A-201ENST00000351487 H3BNG1 76 aa14.94□□□□□ -0.02
UPF3A-201ENST00000351487 TRRAPQ9Y4A5 3859 aa14.94□□□□□ -0.02
UPF3A-201ENST00000351487 CYSRT1A8MQ03 144 aa14.93□□□□□ -0.02
UPF3A-201ENST00000351487 SLPIP03973 132 aa14.93□□□□□ -0.02
UPF3A-201ENST00000351487 C14orf132Q9NPU4 83 aa14.93□□□□□ -0.02
UPF3A-201ENST00000351487 Q8N814 137 aa14.93□□□□□ -0.02
UPF3A-201ENST00000351487 GVQW2A0A096LPI5 108 aaPredicted RBP14.92□□□□□ -0.02
UPF3A-201ENST00000351487 NCR3O14931 201 aa14.91□□□□□ -0.02
UPF3A-201ENST00000351487 OXLD1Q5BKU9 147 aa14.9□□□□□ -0.02
UPF3A-201ENST00000351487 LINC00526Q96FQ7 95 aa14.9□□□□□ -0.02
UPF3A-201ENST00000351487 KRTAP10-11P60412 298 aa14.89□□□□□ -0.03
UPF3A-201ENST00000351487 KPRPQ5T749 579 aaPredicted RBP14.88□□□□□ -0.03
UPF3A-201ENST00000351487 RETNQ9HD89 108 aa14.88□□□□□ -0.03
UPF3A-201ENST00000351487 C6orf99Q4VX62 202 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms