RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 Q6ZVH6 145 aa7.29□□□□□ -1.24
ECM1-201ENST00000346569 SPANXDQ9BXN6 97 aa7.29□□□□□ -1.24
ECM1-201ENST00000346569 KRTAP1-5Q9BYS1 174 aa7.29□□□□□ -1.24
ECM1-201ENST00000346569 SPANXCQ9NY87 97 aa7.29□□□□□ -1.24
ECM1-201ENST00000346569 PRSS2P07478 247 aa7.28□□□□□ -1.24
ECM1-201ENST00000346569 GCSHP23434 173 aa7.28□□□□□ -1.24
ECM1-201ENST00000346569 MUSTN1Q8IVN3 82 aa7.28□□□□□ -1.24
ECM1-201ENST00000346569 Q9HAA7 133 aa7.28□□□□□ -1.24
ECM1-201ENST00000346569 TENM2Q9NT68 2774 aa7.28□□□□□ -1.24
ECM1-201ENST00000346569 CXCL5P42830 114 aa7.27□□□□□ -1.24
ECM1-201ENST00000346569 CIRBPQ14011 172 aaKnown RBP7.27□□□□□ -1.24
ECM1-201ENST00000346569 COL5A1-AS1Q5SY13 56 aa7.27□□□□□ -1.24
ECM1-201ENST00000346569 C2orf82Q6UX34 121 aa7.27□□□□□ -1.24
ECM1-201ENST00000346569 C6orf223Q8N319 242 aa7.27□□□□□ -1.24
ECM1-201ENST00000346569 C15orf56Q8N910 161 aa7.27□□□□□ -1.24
ECM1-201ENST00000346569 NTN5Q8WTR8 489 aaPredicted RBP7.27□□□□□ -1.24
ECM1-201ENST00000346569 SMIM13P0DJ93 91 aa7.27□□□□□ -1.25
ECM1-201ENST00000346569 IFITM1P13164 125 aa7.27□□□□□ -1.25
ECM1-201ENST00000346569 SPAG11BQ08648 103 aa7.27□□□□□ -1.25
ECM1-201ENST00000346569 CFAP161Q6P656 301 aa7.27□□□□□ -1.25
ECM1-201ENST00000346569 RMI2Q96E14 147 aa7.27□□□□□ -1.25
ECM1-201ENST00000346569 A0A1B0GWB2 263 aa7.26□□□□□ -1.25
ECM1-201ENST00000346569 EIF4EBP3O60516 100 aaPredicted RBP7.26□□□□□ -1.25
ECM1-201ENST00000346569 CKS1BP61024 79 aa7.26□□□□□ -1.25
ECM1-201ENST00000346569 CASC10Q5T4H9 136 aa7.26□□□□□ -1.25
ECM1-201ENST00000346569 C10orf25Q5T742 122 aa7.26□□□□□ -1.25
ECM1-201ENST00000346569 UNQ6190/PRO20217Q6UXQ8 127 aa7.26□□□□□ -1.25
ECM1-201ENST00000346569 LINC00526Q96FQ7 95 aa7.26□□□□□ -1.25
ECM1-201ENST00000346569 COX11Q9Y6N1 276 aa7.26□□□□□ -1.25
ECM1-201ENST00000346569 A0A0U1RRA0 63 aa7.25□□□□□ -1.25
ECM1-201ENST00000346569 NBDYA0A0U1RRE5 68 aa7.25□□□□□ -1.25
ECM1-201ENST00000346569 A6NDN8 102 aa7.25□□□□□ -1.25
ECM1-201ENST00000346569 TAX1BP3O14907 124 aa7.25□□□□□ -1.25
ECM1-201ENST00000346569 MEIG1Q5JSS6 88 aa7.25□□□□□ -1.25
ECM1-201ENST00000346569 C2orf48Q96LS8 159 aa7.25□□□□□ -1.25
ECM1-201ENST00000346569 PPDPFQ9H3Y8 114 aa7.25□□□□□ -1.25
ECM1-201ENST00000346569 HYDINQ4G0P3 5121 aa7.25□□□□□ -1.25
ECM1-201ENST00000346569 GVQW2A0A096LPI5 108 aaPredicted RBP7.24□□□□□ -1.25
ECM1-201ENST00000346569 C3orf84H3BNL1 204 aa7.24□□□□□ -1.25
ECM1-201ENST00000346569 SOSTDC1Q6X4U4 206 aa7.24□□□□□ -1.25
ECM1-201ENST00000346569 DAND5Q8N907 189 aa7.24□□□□□ -1.25
ECM1-201ENST00000346569 LINC00308Q8TCZ7 52 aa7.24□□□□□ -1.25
ECM1-201ENST00000346569 ERG28Q9UKR5 140 aa7.24□□□□□ -1.25
ECM1-201ENST00000346569 A4D1N5 150 aa7.23□□□□□ -1.25
ECM1-201ENST00000346569 F8WDY8 70 aa7.23□□□□□ -1.25
ECM1-201ENST00000346569 ZNF561-AS1K7EIQ3 104 aa7.23□□□□□ -1.25
ECM1-201ENST00000346569 CFC1BP0CG36 223 aa7.23□□□□□ -1.25
ECM1-201ENST00000346569 CFC1P0CG37 223 aa7.23□□□□□ -1.25
ECM1-201ENST00000346569 COX17Q14061 63 aa7.23□□□□□ -1.25
ECM1-201ENST00000346569 TTC32Q5I0X7 151 aa7.23□□□□□ -1.25
ECM1-201ENST00000346569 NHP2Q9NX24 153 aaKnown RBP7.23□□□□□ -1.25
ECM1-201ENST00000346569 LOC107984156A0A0G2JMH3 177 aa7.22□□□□□ -1.25
ECM1-201ENST00000346569 TMEM238LA0A1B0GVL6 79 aa7.22□□□□□ -1.25
ECM1-201ENST00000346569 A6NJY4 79 aa7.22□□□□□ -1.25
ECM1-201ENST00000346569 PFN2P35080 140 aa7.22□□□□□ -1.25
ECM1-201ENST00000346569 LINC00158P58513 81 aa7.22□□□□□ -1.25
ECM1-201ENST00000346569 RPL24P83731 157 aaKnown RBP7.22□□□□□ -1.25
ECM1-201ENST00000346569 HIGD2BQ4VC39 106 aa7.22□□□□□ -1.25
ECM1-201ENST00000346569 C9orf116Q5BN46 136 aaPredicted RBP7.22□□□□□ -1.25
ECM1-201ENST00000346569 ARL17AQ8IVW1 177 aa7.22□□□□□ -1.25
ECM1-201ENST00000346569 MIR7-3HGQ8N6C7 128 aa7.22□□□□□ -1.25
ECM1-201ENST00000346569 ALMS1Q8TCU4 4167 aa7.22□□□□□ -1.25
ECM1-201ENST00000346569 USP17L23D6RBM5 183 aa7.21□□□□□ -1.25
ECM1-201ENST00000346569 C6orf48Q9UBA6 75 aa7.21□□□□□ -1.25
ECM1-201ENST00000346569 TRBV30A0A0K0K1B3 111 aa7.2□□□□□ -1.26
ECM1-201ENST00000346569 SLPIP03973 132 aa7.2□□□□□ -1.26
ECM1-201ENST00000346569 NPC2P61916 151 aa7.2□□□□□ -1.26
ECM1-201ENST00000346569 Q6ZR54 194 aa7.2□□□□□ -1.26
ECM1-201ENST00000346569 EPPK1P58107 5090 aaKnown RBP7.2□□□□□ -1.26
ECM1-201ENST00000346569 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.19□□□□□ -1.26
ECM1-201ENST00000346569 Q6ZRN7 208 aaPredicted RBP7.19□□□□□ -1.26
ECM1-201ENST00000346569 Q6ZRU5 148 aa7.19□□□□□ -1.26
ECM1-201ENST00000346569 COPS9Q8WXC6 57 aa7.19□□□□□ -1.26
ECM1-201ENST00000346569 CAMK2N2Q96S95 79 aa7.19□□□□□ -1.26
ECM1-201ENST00000346569 DNAH10Q8IVF4 4471 aa7.19□□□□□ -1.26
ECM1-201ENST00000346569 K7ERJ3 54 aa7.18□□□□□ -1.26
ECM1-201ENST00000346569 WFDC2Q14508 124 aa7.18□□□□□ -1.26
ECM1-201ENST00000346569 RNF151Q2KHN1 245 aa7.18□□□□□ -1.26
ECM1-201ENST00000346569 C4orf48Q5BLP8 95 aa7.18□□□□□ -1.26
ECM1-201ENST00000346569 RAB37Q96AX2 223 aa7.18□□□□□ -1.26
ECM1-201ENST00000346569 KMT2AQ03164 3969 aa7.18□□□□□ -1.26
ECM1-201ENST00000346569 A0A0B4J2C4 111 aa7.18□□□□□ -1.26
ECM1-201ENST00000346569 A0A1B0GV90 55 aa7.18□□□□□ -1.26
ECM1-201ENST00000346569 C9orf118A6NHY6 69 aa7.18□□□□□ -1.26
ECM1-201ENST00000346569 SYCNQ0VAF6 134 aa7.18□□□□□ -1.26
ECM1-201ENST00000346569 LCE2DQ5TA82 110 aaPredicted RBP7.18□□□□□ -1.26
ECM1-201ENST00000346569 M0R2N4 97 aa7.17□□□□□ -1.26
ECM1-201ENST00000346569 PRO1854Q9UHT4 67 aa7.17□□□□□ -1.26
ECM1-201ENST00000346569 LRCOL1A6NCL2 159 aa7.16□□□□□ -1.26
ECM1-201ENST00000346569 LECT2O14960 151 aa7.16□□□□□ -1.26
ECM1-201ENST00000346569 LINC00476Q8WZB0 136 aa7.16□□□□□ -1.26
ECM1-201ENST00000346569 SND1-IT1Q9HBX3 110 aa7.16□□□□□ -1.26
ECM1-201ENST00000346569 DNAH6Q9C0G6 4158 aa7.15□□□□□ -1.26
ECM1-201ENST00000346569 IGKV2-28A0A075B6P5 120 aa7.15□□□□□ -1.27
ECM1-201ENST00000346569 PSCAO43653 123 aa7.15□□□□□ -1.27
ECM1-201ENST00000346569 IGKV2D-28P01615 120 aa7.15□□□□□ -1.27
ECM1-201ENST00000346569 KRTAP3-3Q9BYR6 98 aa7.15□□□□□ -1.27
ECM1-201ENST00000346569 KRTAP3-2Q9BYR7 98 aa7.15□□□□□ -1.27
ECM1-201ENST00000346569 NDUFC2-KCTD14E9PQ53 114 aa7.14□□□□□ -1.27
ECM1-201ENST00000346569 H3BUT2 72 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms