RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 D6R8Y8 96 aa9.19□□□□□ -0.94
NECTIN1-202ENST00000340882 SEC61BP60468 96 aaKnown RBP9.19□□□□□ -0.94
NECTIN1-202ENST00000340882 ALKBH7Q9BT30 221 aaPredicted RBP9.19□□□□□ -0.94
NECTIN1-202ENST00000340882 EIF5A2Q9GZV4 153 aaKnown RBP9.19□□□□□ -0.94
NECTIN1-202ENST00000340882 hCG_2014768A0A024R1R8 64 aa9.18□□□□□ -0.94
NECTIN1-202ENST00000340882 F8VRH5 84 aa9.17□□□□□ -0.94
NECTIN1-202ENST00000340882 TEX43Q6ZNM6 134 aa9.17□□□□□ -0.94
NECTIN1-202ENST00000340882 SMIM7Q9BQ49 75 aa9.17□□□□□ -0.94
NECTIN1-202ENST00000340882 IGLV5-37A0A075B6J1 123 aa9.16□□□□□ -0.94
NECTIN1-202ENST00000340882 IGKV2-28A0A075B6P5 120 aa9.16□□□□□ -0.94
NECTIN1-202ENST00000340882 IGKV2D-28P01615 120 aa9.16□□□□□ -0.94
NECTIN1-202ENST00000340882 NAT8BQ9UHF3 227 aa9.16□□□□□ -0.94
NECTIN1-202ENST00000340882 LORP23490 312 aaPredicted RBP9.15□□□□□ -0.94
NECTIN1-202ENST00000340882 FAM74A3Q4VXF1 159 aa9.15□□□□□ -0.94
NECTIN1-202ENST00000340882 PLEKHB2Q96CS7 222 aa9.15□□□□□ -0.94
NECTIN1-202ENST00000340882 SPAG11AQ6PDA7 123 aa9.14□□□□□ -0.95
NECTIN1-202ENST00000340882 AMELXQ99217 191 aa9.14□□□□□ -0.95
NECTIN1-202ENST00000340882 KRTAP9-7A8MTY7 169 aa9.13□□□□□ -0.95
NECTIN1-202ENST00000340882 TMEM238C9JI98 176 aa9.13□□□□□ -0.95
NECTIN1-202ENST00000340882 CDKN2A-AS1Q9UH64 79 aa9.13□□□□□ -0.95
NECTIN1-202ENST00000340882 RAB5AP20339 215 aa9.12□□□□□ -0.95
NECTIN1-202ENST00000340882 C2orf66Q6UXQ4 117 aa9.12□□□□□ -0.95
NECTIN1-202ENST00000340882 FAM19A3Q7Z5A8 133 aa9.12□□□□□ -0.95
NECTIN1-202ENST00000340882 FAM19A1Q7Z5A9 133 aa9.12□□□□□ -0.95
NECTIN1-202ENST00000340882 DAND5Q8N907 189 aa9.12□□□□□ -0.95
NECTIN1-202ENST00000340882 C2orf88Q9BSF0 95 aa9.12□□□□□ -0.95
NECTIN1-202ENST00000340882 SMIM27A0A1W2PRY6 76 aa9.11□□□□□ -0.95
NECTIN1-202ENST00000340882 KRTAP10-6P60371 365 aaPredicted RBP9.11□□□□□ -0.95
NECTIN1-202ENST00000340882 NKAPP1Q8N9T2 125 aa9.11□□□□□ -0.95
NECTIN1-202ENST00000340882 SLC51BQ86UW2 128 aa9.1□□□□□ -0.95
NECTIN1-202ENST00000340882 TMEM126AQ9H061 195 aa9.1□□□□□ -0.95
NECTIN1-202ENST00000340882 CFC1BP0CG36 223 aa9.09□□□□□ -0.95
NECTIN1-202ENST00000340882 RAB5BP61020 215 aa9.09□□□□□ -0.95
NECTIN1-202ENST00000340882 MRPL54Q6P161 138 aaKnown RBP9.09□□□□□ -0.95
NECTIN1-202ENST00000340882 VCX2Q9H322 139 aa9.09□□□□□ -0.95
NECTIN1-202ENST00000340882 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.08□□□□□ -0.96
NECTIN1-202ENST00000340882 SRP19P09132 144 aaKnown RBP9.08□□□□□ -0.96
NECTIN1-202ENST00000340882 Q8NBF4 154 aa9.08□□□□□ -0.96
NECTIN1-202ENST00000340882 LOC389332A0A1B0GUA5 103 aa9.07□□□□□ -0.96
NECTIN1-202ENST00000340882 A0A1B0GXF2 115 aa9.07□□□□□ -0.96
NECTIN1-202ENST00000340882 M0R378 163 aa9.07□□□□□ -0.96
NECTIN1-202ENST00000340882 RPL23P62829 140 aaKnown RBP9.07□□□□□ -0.96
NECTIN1-202ENST00000340882 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
NECTIN1-202ENST00000340882 XP32Q5T750 250 aa9.07□□□□□ -0.96
NECTIN1-202ENST00000340882 A0A1B0GW15 77 aa9.06□□□□□ -0.96
NECTIN1-202ENST00000340882 IGIPA6NJ69 53 aa9.06□□□□□ -0.96
NECTIN1-202ENST00000340882 PPBPP02775 128 aa9.06□□□□□ -0.96
NECTIN1-202ENST00000340882 CXCL5P42830 114 aa9.06□□□□□ -0.96
NECTIN1-202ENST00000340882 CBLN2Q8IUK8 224 aa9.06□□□□□ -0.96
NECTIN1-202ENST00000340882 PRELID3AQ96N28 172 aa9.06□□□□□ -0.96
NECTIN1-202ENST00000340882 SPRR4Q96PI1 79 aa9.06□□□□□ -0.96
NECTIN1-202ENST00000340882 SMIM1B2RUZ4 78 aa9.05□□□□□ -0.96
NECTIN1-202ENST00000340882 HERVK_113P63121 156 aa9.05□□□□□ -0.96
NECTIN1-202ENST00000340882 ALKAL2Q6UX46 152 aa9.05□□□□□ -0.96
NECTIN1-202ENST00000340882 TMEM136Q6ZRR5 245 aa9.05□□□□□ -0.96
NECTIN1-202ENST00000340882 AKAP14Q86UN6 197 aa9.05□□□□□ -0.96
NECTIN1-202ENST00000340882 ORMDL3Q8N138 153 aa9.05□□□□□ -0.96
NECTIN1-202ENST00000340882 HIGD2AQ9BW72 106 aa9.05□□□□□ -0.96
NECTIN1-202ENST00000340882 CYSLTR1Q9Y271 337 aa9.05□□□□□ -0.96
NECTIN1-202ENST00000340882 F8W036 122 aa9.04□□□□□ -0.96
NECTIN1-202ENST00000340882 BLOC1S1P78537 153 aa9.04□□□□□ -0.96
NECTIN1-202ENST00000340882 COX7B2Q8TF08 81 aa9.04□□□□□ -0.96
NECTIN1-202ENST00000340882 PRSS47A8MTI9 375 aa9.03□□□□□ -0.96
NECTIN1-202ENST00000340882 VPREB1P12018 145 aa9.03□□□□□ -0.96
NECTIN1-202ENST00000340882 Q8NDZ9 215 aa9.03□□□□□ -0.96
NECTIN1-202ENST00000340882 ADIRFQ15847 76 aa9.02□□□□□ -0.97
NECTIN1-202ENST00000340882 GEMIN7Q9H840 131 aaKnown RBP9.02□□□□□ -0.97
NECTIN1-202ENST00000340882 GNB1LQ9BYB4 327 aa9.01□□□□□ -0.97
NECTIN1-202ENST00000340882 SPINK1P00995 79 aa9□□□□□ -0.97
NECTIN1-202ENST00000340882 Q8N8P6 123 aa9□□□□□ -0.97
NECTIN1-202ENST00000340882 S100A8P05109 93 aa8.99□□□□□ -0.97
NECTIN1-202ENST00000340882 NPSP0C0P6 89 aa8.99□□□□□ -0.97
NECTIN1-202ENST00000340882 SEC11AP67812 179 aa8.99□□□□□ -0.97
NECTIN1-202ENST00000340882 NDUFA5Q16718 116 aa8.99□□□□□ -0.97
NECTIN1-202ENST00000340882 PDZD11Q5EBL8 140 aa8.99□□□□□ -0.97
NECTIN1-202ENST00000340882 Q8N377 158 aa8.99□□□□□ -0.97
NECTIN1-202ENST00000340882 FLGP20930 4061 aaPredicted RBP8.99□□□□□ -0.97
NECTIN1-202ENST00000340882 ATP6V1G1O75348 118 aa8.98□□□□□ -0.97
NECTIN1-202ENST00000340882 MAP1LC3AQ9H492 121 aa8.98□□□□□ -0.97
NECTIN1-202ENST00000340882 C9JQL5 133 aa8.97□□□□□ -0.97
NECTIN1-202ENST00000340882 SPINK8P0C7L1 97 aa8.97□□□□□ -0.97
NECTIN1-202ENST00000340882 PFN2P35080 140 aa8.97□□□□□ -0.97
NECTIN1-202ENST00000340882 SND1-IT1Q9HBX3 110 aa8.96□□□□□ -0.98
NECTIN1-202ENST00000340882 IGLV5-45A0A087WSX0 123 aa8.95□□□□□ -0.98
NECTIN1-202ENST00000340882 ORMDL2Q53FV1 153 aa8.95□□□□□ -0.98
NECTIN1-202ENST00000340882 PCOTHQ58A44 107 aa8.95□□□□□ -0.98
NECTIN1-202ENST00000340882 TCTE3Q8IZS6 198 aa8.95□□□□□ -0.98
NECTIN1-202ENST00000340882 NAT8Q9UHE5 227 aa8.95□□□□□ -0.98
NECTIN1-202ENST00000340882 SSPOA2VEC9 5147 aa8.95□□□□□ -0.98
NECTIN1-202ENST00000340882 RAB14P61106 215 aa8.94□□□□□ -0.98
NECTIN1-202ENST00000340882 NDUFA12Q9UI09 145 aa8.94□□□□□ -0.98
NECTIN1-202ENST00000340882 IGLV8-61A0A075B6I0 122 aa8.93□□□□□ -0.98
NECTIN1-202ENST00000340882 TINCRA0A1B0GVN0 87 aa8.93□□□□□ -0.98
NECTIN1-202ENST00000340882 TIMM17AQ99595 171 aa8.93□□□□□ -0.98
NECTIN1-202ENST00000340882 LAMTOR2Q9Y2Q5 125 aa8.93□□□□□ -0.98
NECTIN1-202ENST00000340882 ADCYAP1P18509 176 aa8.91□□□□□ -0.98
NECTIN1-202ENST00000340882 S100A1P23297 94 aa8.91□□□□□ -0.98
NECTIN1-202ENST00000340882 PAPPA-AS1Q5QFB9 102 aa8.91□□□□□ -0.98
NECTIN1-202ENST00000340882 TOMM6Q96B49 74 aa8.91□□□□□ -0.98
NECTIN1-202ENST00000340882 ZNF706Q9Y5V0 76 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms