RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 LINC01546A6NGU7 62 aa13.74□□□□□ -0.21
CDK13-202ENST00000340829 Q8N2B8 174 aa13.73□□□□□ -0.21
CDK13-202ENST00000340829 BPTFQ12830 3046 aa13.72□□□□□ -0.21
CDK13-202ENST00000340829 Q6ZTC4 211 aa13.71□□□□□ -0.21
CDK13-202ENST00000340829 RPL28P46779 137 aaKnown RBP13.71□□□□□ -0.22
CDK13-202ENST00000340829 MKI67P46013 3256 aaKnown RBP13.69□□□□□ -0.22
CDK13-202ENST00000340829 A0A087WYN8 130 aa13.69□□□□□ -0.22
CDK13-202ENST00000340829 C3orf22Q8N5N4 141 aa13.69□□□□□ -0.22
CDK13-202ENST00000340829 M0R2N4 97 aa13.68□□□□□ -0.22
CDK13-202ENST00000340829 PPDPFQ9H3Y8 114 aa13.67□□□□□ -0.22
CDK13-202ENST00000340829 USP17L23D6RBM5 183 aa13.67□□□□□ -0.22
CDK13-202ENST00000340829 MUC7Q8TAX7 377 aa13.67□□□□□ -0.22
CDK13-202ENST00000340829 IMUPQ9GZP8 106 aa13.67□□□□□ -0.22
CDK13-202ENST00000340829 LAMA3Q16787 3333 aa13.66□□□□□ -0.22
CDK13-202ENST00000340829 TRBV10-3A0A0K0K1G6 114 aa13.66□□□□□ -0.22
CDK13-202ENST00000340829 C6orf223Q8N319 242 aa13.66□□□□□ -0.22
CDK13-202ENST00000340829 DHRS4-AS1Q9P1J3 65 aa13.65□□□□□ -0.22
CDK13-202ENST00000340829 Q9UF83 564 aa13.65□□□□□ -0.22
CDK13-202ENST00000340829 A0A1B0GUV1 79 aa13.65□□□□□ -0.22
CDK13-202ENST00000340829 EGFEM1PQ0D2K5 195 aa13.64□□□□□ -0.23
CDK13-202ENST00000340829 LOC107984640A0A0U1RRK4 108 aa13.64□□□□□ -0.23
CDK13-202ENST00000340829 LRCOL1A6NCL2 159 aa13.64□□□□□ -0.23
CDK13-202ENST00000340829 Q8N814 137 aa13.64□□□□□ -0.23
CDK13-202ENST00000340829 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.63□□□□□ -0.23
CDK13-202ENST00000340829 BRCA2P51587 3418 aa13.63□□□□□ -0.23
CDK13-202ENST00000340829 NTM-AS1Q6ZSK4 140 aa13.63□□□□□ -0.23
CDK13-202ENST00000340829 CCDC179H3BU77 68 aa13.62□□□□□ -0.23
CDK13-202ENST00000340829 FAM240AA0A1B0GVK7 77 aa13.61□□□□□ -0.23
CDK13-202ENST00000340829 WFDC10BQ8IUB3 73 aa13.61□□□□□ -0.23
CDK13-202ENST00000340829 IGKV4-1P06312 121 aa13.6□□□□□ -0.23
CDK13-202ENST00000340829 SERP2Q8N6R1 65 aa13.59□□□□□ -0.23
CDK13-202ENST00000340829 LYPD5Q6UWN5 251 aa13.58□□□□□ -0.23
CDK13-202ENST00000340829 LINC00337Q8N6G1 96 aa13.58□□□□□ -0.24
CDK13-202ENST00000340829 IGLV5-39A0A0G2JS06 123 aa13.57□□□□□ -0.24
CDK13-202ENST00000340829 FHL3Q13643 280 aa13.57□□□□□ -0.24
CDK13-202ENST00000340829 Q6JHZ5 121 aa13.57□□□□□ -0.24
CDK13-202ENST00000340829 FAM236DA0A1B0GTK5 79 aa13.56□□□□□ -0.24
CDK13-202ENST00000340829 FAM236CP0DP71 79 aa13.56□□□□□ -0.24
CDK13-202ENST00000340829 CELA1Q9UNI1 258 aa13.56□□□□□ -0.24
CDK13-202ENST00000340829 KLK9Q2XQG4 91 aa13.55□□□□□ -0.24
CDK13-202ENST00000340829 SNURFQ9Y675 71 aa13.54□□□□□ -0.24
CDK13-202ENST00000340829 A8MTW9 85 aa13.53□□□□□ -0.24
CDK13-202ENST00000340829 A0A087WVE0 104 aa13.53□□□□□ -0.24
CDK13-202ENST00000340829 IGHV3OR16-9A0A0B4J2B5 98 aa13.53□□□□□ -0.24
CDK13-202ENST00000340829 COX7CP15954 63 aa13.53□□□□□ -0.24
CDK13-202ENST00000340829 Q6Q795 121 aa13.53□□□□□ -0.24
CDK13-202ENST00000340829 NDUFC2O95298 119 aa13.52□□□□□ -0.25
CDK13-202ENST00000340829 WFDC13Q8IUB5 93 aa13.52□□□□□ -0.25
CDK13-202ENST00000340829 F8P00451 2351 aa13.52□□□□□ -0.25
CDK13-202ENST00000340829 MUC4Q99102 2169 aa13.52□□□□□ -0.25
CDK13-202ENST00000340829 NDUFC2-KCTD14E9PQ53 114 aa13.51□□□□□ -0.25
CDK13-202ENST00000340829 M0QXV9 152 aa13.51□□□□□ -0.25
CDK13-202ENST00000340829 PLAC8L1A1L4L8 177 aa13.5□□□□□ -0.25
CDK13-202ENST00000340829 HRCT1Q6UXD1 115 aa13.49□□□□□ -0.25
CDK13-202ENST00000340829 TRANK1O15050 2925 aa13.48□□□□□ -0.25
CDK13-202ENST00000340829 FAM19A3Q7Z5A8 133 aa13.48□□□□□ -0.25
CDK13-202ENST00000340829 FSHBP01225 129 aa13.48□□□□□ -0.25
CDK13-202ENST00000340829 LINC01561Q8N1V8 128 aa13.47□□□□□ -0.25
CDK13-202ENST00000340829 Q6ZRU5 148 aa13.47□□□□□ -0.25
CDK13-202ENST00000340829 A0A0C4DFX4 3053 aa13.47□□□□□ -0.25
CDK13-202ENST00000340829 LY6G6CO95867 125 aa13.46□□□□□ -0.25
CDK13-202ENST00000340829 IGLV9-49A0A0B4J1Y8 123 aa13.46□□□□□ -0.26
CDK13-202ENST00000340829 SPINK6Q6UWN8 80 aa13.46□□□□□ -0.26
CDK13-202ENST00000340829 IGLV5-45A0A087WSX0 123 aa13.45□□□□□ -0.26
CDK13-202ENST00000340829 MPLKIPQ8TAP9 179 aa13.45□□□□□ -0.26
CDK13-202ENST00000340829 SMCPP49901 116 aaPredicted RBP13.45□□□□□ -0.26
CDK13-202ENST00000340829 C1orf137Q5JT78 98 aa13.44□□□□□ -0.26
CDK13-202ENST00000340829 C7orf33Q8WU49 177 aa13.44□□□□□ -0.26
CDK13-202ENST00000340829 BRK1Q8WUW1 75 aa13.44□□□□□ -0.26
CDK13-202ENST00000340829 C2orf48Q96LS8 159 aa13.44□□□□□ -0.26
CDK13-202ENST00000340829 X6R8D5 127 aa13.44□□□□□ -0.26
CDK13-202ENST00000340829 LINC00575Q6W349 94 aa13.43□□□□□ -0.26
CDK13-202ENST00000340829 CDIP1Q9H305 208 aa13.43□□□□□ -0.26
CDK13-202ENST00000340829 REG3GQ6UW15 175 aa13.42□□□□□ -0.26
CDK13-202ENST00000340829 SOSTDC1Q6X4U4 206 aa13.42□□□□□ -0.26
CDK13-202ENST00000340829 LAMA2P24043 3122 aaKnown RBP13.42□□□□□ -0.26
CDK13-202ENST00000340829 LINC00474Q9P2X8 69 aa13.41□□□□□ -0.26
CDK13-202ENST00000340829 CASC2Q6XLA1 102 aa13.41□□□□□ -0.26
CDK13-202ENST00000340829 LINC00846Q9NV44 126 aa13.41□□□□□ -0.26
CDK13-202ENST00000340829 SEC61GP60059 68 aa13.4□□□□□ -0.26
CDK13-202ENST00000340829 FAM30AQ9NZY2 134 aa13.4□□□□□ -0.27
CDK13-202ENST00000340829 PRO0461Q9UI25 63 aa13.39□□□□□ -0.27
CDK13-202ENST00000340829 ZNF706Q9Y5V0 76 aaPredicted RBP13.39□□□□□ -0.27
CDK13-202ENST00000340829 PRR4Q16378 134 aa13.39□□□□□ -0.27
CDK13-202ENST00000340829 Q8N3U1 123 aa13.38□□□□□ -0.27
CDK13-202ENST00000340829 FLNBO75369 2602 aaKnown RBP13.38□□□□□ -0.27
CDK13-202ENST00000340829 NUPR2A6NF83 97 aa13.38□□□□□ -0.27
CDK13-202ENST00000340829 HECTD1Q9ULT8 2610 aa13.37□□□□□ -0.27
CDK13-202ENST00000340829 SPTSSBQ8NFR3 76 aa13.36□□□□□ -0.27
CDK13-202ENST00000340829 NDUFC1O43677 76 aa13.36□□□□□ -0.27
CDK13-202ENST00000340829 MRPL55Q7Z7F7 128 aaKnown RBP13.36□□□□□ -0.27
CDK13-202ENST00000340829 UNC80Q8N2C7 3258 aa13.36□□□□□ -0.27
CDK13-202ENST00000340829 ESRGQ1W209 222 aa13.36□□□□□ -0.27
CDK13-202ENST00000340829 SVIPQ8NHG7 77 aa13.35□□□□□ -0.27
CDK13-202ENST00000340829 C10orf25Q5T742 122 aa13.35□□□□□ -0.27
CDK13-202ENST00000340829 FAM218AQ96MZ4 157 aa13.34□□□□□ -0.27
CDK13-202ENST00000340829 F8WDY8 70 aa13.34□□□□□ -0.27
CDK13-202ENST00000340829 CFAP54Q96N23 3096 aa13.32□□□□□ -0.28
CDK13-202ENST00000340829 TRAV7A0A075B6U4 112 aa13.32□□□□□ -0.28
CDK13-202ENST00000340829 PRUNE2Q8WUY3 3088 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms