RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 CUBNO60494 3623 aa10.91□□□□□ -0.66
LIMK2-203ENST00000340552 LECT2O14960 151 aa10.91□□□□□ -0.66
LIMK2-203ENST00000340552 SLPIP03973 132 aa10.9□□□□□ -0.66
LIMK2-203ENST00000340552 NF1P21359 2839 aa10.9□□□□□ -0.66
LIMK2-203ENST00000340552 F8WDY8 70 aa10.9□□□□□ -0.66
LIMK2-203ENST00000340552 SLURP1P55000 103 aa10.9□□□□□ -0.66
LIMK2-203ENST00000340552 DGAT2L7PQ6IED9 249 aa10.9□□□□□ -0.66
LIMK2-203ENST00000340552 H7BZZ5 65 aa10.89□□□□□ -0.67
LIMK2-203ENST00000340552 SS18Q15532 418 aa10.89□□□□□ -0.67
LIMK2-203ENST00000340552 C16orf95Q9H693 158 aa10.89□□□□□ -0.67
LIMK2-203ENST00000340552 NOTCH2Q04721 2471 aa10.89□□□□□ -0.67
LIMK2-203ENST00000340552 PRM2P04554 102 aa10.89□□□□□ -0.67
LIMK2-203ENST00000340552 C4orf3Q8WVX3 66 aa10.88□□□□□ -0.67
LIMK2-203ENST00000340552 CCKP06307 115 aa10.88□□□□□ -0.67
LIMK2-203ENST00000340552 ENHOQ6UWT2 76 aa10.88□□□□□ -0.67
LIMK2-203ENST00000340552 MIR7-3HGQ8N6C7 128 aa10.88□□□□□ -0.67
LIMK2-203ENST00000340552 SND1-IT1Q9HBX3 110 aa10.87□□□□□ -0.67
LIMK2-203ENST00000340552 FP248Q71RG6 208 aaPredicted RBP10.87□□□□□ -0.67
LIMK2-203ENST00000340552 SMR3AQ99954 134 aa10.86□□□□□ -0.67
LIMK2-203ENST00000340552 H0YGX0 51 aa10.86□□□□□ -0.67
LIMK2-203ENST00000340552 K7EQG2 157 aa10.86□□□□□ -0.67
LIMK2-203ENST00000340552 SNRPD3P62318 126 aaKnown RBP10.86□□□□□ -0.67
LIMK2-203ENST00000340552 HIVEP2P31629 2446 aa10.85□□□□□ -0.67
LIMK2-203ENST00000340552 LYPD5Q6UWN5 251 aa10.85□□□□□ -0.67
LIMK2-203ENST00000340552 RNASE1P07998 156 aaKnown RBP10.84□□□□□ -0.67
LIMK2-203ENST00000340552 RPL36AP83881 106 aaKnown RBP10.84□□□□□ -0.67
LIMK2-203ENST00000340552 C11orf44Q8N8P7 122 aa10.84□□□□□ -0.67
LIMK2-203ENST00000340552 RPL36ALQ969Q0 106 aaKnown RBP10.84□□□□□ -0.67
LIMK2-203ENST00000340552 ATP5EP2Q5VTU8 51 aa10.84□□□□□ -0.67
LIMK2-203ENST00000340552 FAM19A3Q7Z5A8 133 aa10.83□□□□□ -0.68
LIMK2-203ENST00000340552 SETD2Q9BYW2 2564 aaPredicted RBP10.83□□□□□ -0.68
LIMK2-203ENST00000340552 S100A7L2Q5SY68 101 aa10.83□□□□□ -0.68
LIMK2-203ENST00000340552 WNK1Q9H4A3 2382 aa10.83□□□□□ -0.68
LIMK2-203ENST00000340552 LINC01006Q8NI28 216 aa10.82□□□□□ -0.68
LIMK2-203ENST00000340552 ORMDL1Q9P0S3 153 aa10.82□□□□□ -0.68
LIMK2-203ENST00000340552 A0A1W2PRX2 142 aa10.81□□□□□ -0.68
LIMK2-203ENST00000340552 SMIM26A0A096LP01 95 aa10.8□□□□□ -0.68
LIMK2-203ENST00000340552 IGHV3-53P01767 116 aa10.8□□□□□ -0.68
LIMK2-203ENST00000340552 CCL18P55774 89 aa10.8□□□□□ -0.68
LIMK2-203ENST00000340552 C11orf72Q8NBR9 251 aa10.8□□□□□ -0.68
LIMK2-203ENST00000340552 LY6G6DO95868 133 aa10.79□□□□□ -0.68
LIMK2-203ENST00000340552 SNURFQ9Y675 71 aa10.79□□□□□ -0.68
LIMK2-203ENST00000340552 DYNLRB2Q8TF09 96 aa10.78□□□□□ -0.68
LIMK2-203ENST00000340552 LINC00474Q9P2X8 69 aa10.78□□□□□ -0.68
LIMK2-203ENST00000340552 TRAV7A0A075B6U4 112 aa10.78□□□□□ -0.68
LIMK2-203ENST00000340552 RMI2Q96E14 147 aa10.78□□□□□ -0.68
LIMK2-203ENST00000340552 KLKP1Q107X0 134 aa10.77□□□□□ -0.68
LIMK2-203ENST00000340552 TRBV10-3A0A0K0K1G6 114 aa10.77□□□□□ -0.69
LIMK2-203ENST00000340552 LINC00158P58513 81 aa10.77□□□□□ -0.69
LIMK2-203ENST00000340552 CCL24O00175 119 aa10.77□□□□□ -0.69
LIMK2-203ENST00000340552 OTOGQ6ZRI0 2925 aa10.76□□□□□ -0.69
LIMK2-203ENST00000340552 DEFB131AP59861 70 aa10.76□□□□□ -0.69
LIMK2-203ENST00000340552 F8WEM9 126 aa10.76□□□□□ -0.69
LIMK2-203ENST00000340552 DEFB114Q30KQ6 69 aa10.76□□□□□ -0.69
LIMK2-203ENST00000340552 TOMM7Q9P0U1 55 aa10.76□□□□□ -0.69
LIMK2-203ENST00000340552 COX7B2Q8TF08 81 aa10.75□□□□□ -0.69
LIMK2-203ENST00000340552 CDC42SE2Q9NRR3 84 aa10.75□□□□□ -0.69
LIMK2-203ENST00000340552 A0A0U1RQV1 116 aa10.75□□□□□ -0.69
LIMK2-203ENST00000340552 JMJD7-PLA2G4BH0Y9G9 81 aa10.74□□□□□ -0.69
LIMK2-203ENST00000340552 BRK1Q8WUW1 75 aa10.74□□□□□ -0.69
LIMK2-203ENST00000340552 UBL5Q9BZL1 73 aa10.74□□□□□ -0.69
LIMK2-203ENST00000340552 NTM-AS1Q6ZSK4 140 aa10.74□□□□□ -0.69
LIMK2-203ENST00000340552 Q6ZTI0 123 aa10.74□□□□□ -0.69
LIMK2-203ENST00000340552 TRAV10A0A0B4J240 114 aa10.73□□□□□ -0.69
LIMK2-203ENST00000340552 PAX4O43316 350 aa10.73□□□□□ -0.69
LIMK2-203ENST00000340552 SEC61GP60059 68 aa10.73□□□□□ -0.69
LIMK2-203ENST00000340552 SETXQ7Z333 2677 aaKnown RBP10.72□□□□□ -0.69
LIMK2-203ENST00000340552 TRBV7-6A0A0J9YX20 115 aa10.72□□□□□ -0.69
LIMK2-203ENST00000340552 LINC00167Q96N53 147 aa10.72□□□□□ -0.69
LIMK2-203ENST00000340552 MAP6D1Q9H9H5 199 aa10.71□□□□□ -0.69
LIMK2-203ENST00000340552 INAFM1C9JVW0 142 aa10.71□□□□□ -0.69
LIMK2-203ENST00000340552 C1orf195Q5TG92 126 aa10.71□□□□□ -0.69
LIMK2-203ENST00000340552 BCE1O60756 84 aa10.71□□□□□ -0.7
LIMK2-203ENST00000340552 RBM3P98179 157 aaKnown RBP10.71□□□□□ -0.7
LIMK2-203ENST00000340552 V9GYY9 64 aa10.7□□□□□ -0.7
LIMK2-203ENST00000340552 TRBV6-4A0A1B0GX49 114 aa10.7□□□□□ -0.7
LIMK2-203ENST00000340552 A8MTW9 85 aa10.69□□□□□ -0.7
LIMK2-203ENST00000340552 Q8N814 137 aa10.69□□□□□ -0.7
LIMK2-203ENST00000340552 LINC00482Q8N8I6 264 aa10.69□□□□□ -0.7
LIMK2-203ENST00000340552 C2CD3Q4AC94 2353 aa10.68□□□□□ -0.7
LIMK2-203ENST00000340552 TMEM256-PLSCR3K7ERE1 68 aa10.67□□□□□ -0.7
LIMK2-203ENST00000340552 NSD1Q96L73 2696 aaPredicted RBP10.67□□□□□ -0.7
LIMK2-203ENST00000340552 IBA57-AS1B1ANH7 110 aa10.66□□□□□ -0.7
LIMK2-203ENST00000340552 FN1P02751 2386 aaKnown RBP10.66□□□□□ -0.7
LIMK2-203ENST00000340552 K7EQD1 137 aa10.66□□□□□ -0.7
LIMK2-203ENST00000340552 M0R2N4 97 aa10.66□□□□□ -0.7
LIMK2-203ENST00000340552 LINC01547P58512 204 aaPredicted RBP10.66□□□□□ -0.7
LIMK2-203ENST00000340552 ODF3L2Q3SX64 289 aa10.66□□□□□ -0.7
LIMK2-203ENST00000340552 HIVEP1P15822 2718 aa10.66□□□□□ -0.7
LIMK2-203ENST00000340552 IGKV3OR2-268A0A0C4DH90 116 aa10.65□□□□□ -0.7
LIMK2-203ENST00000340552 NANOS2P60321 138 aaKnown RBP10.65□□□□□ -0.71
LIMK2-203ENST00000340552 FAM229BQ4G0N7 80 aa10.65□□□□□ -0.71
LIMK2-203ENST00000340552 KRTAP10-3P60369 221 aa10.64□□□□□ -0.71
LIMK2-203ENST00000340552 HAMPP81172 84 aa10.64□□□□□ -0.71
LIMK2-203ENST00000340552 Q6ZQT0 140 aa10.63□□□□□ -0.71
LIMK2-203ENST00000340552 TM2D3Q9BRN9 247 aa10.63□□□□□ -0.71
LIMK2-203ENST00000340552 C11orf68Q9H3H3 251 aaKnown RBP10.63□□□□□ -0.71
LIMK2-203ENST00000340552 PRR3P79522 188 aaKnown RBP10.62□□□□□ -0.71
LIMK2-203ENST00000340552 NIPBLQ6KC79 2804 aaeCLIP10.62□□□□□ -0.71
LIMK2-203ENST00000340552 UBE2L6O14933 153 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms