RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 CDKN2A-AS1Q9UH64 79 aa9.66□□□□□ -0.86
H3F3C-201ENST00000340398 A0A087X002 238 aa9.65□□□□□ -0.86
H3F3C-201ENST00000340398 LBHQ53QV2 105 aaPredicted RBP9.65□□□□□ -0.86
H3F3C-201ENST00000340398 FAM19A3Q7Z5A8 133 aa9.65□□□□□ -0.86
H3F3C-201ENST00000340398 LAMTOR2Q9Y2Q5 125 aa9.65□□□□□ -0.86
H3F3C-201ENST00000340398 NUPR1O60356 82 aa9.64□□□□□ -0.87
H3F3C-201ENST00000340398 ATP6V1G1O75348 118 aa9.64□□□□□ -0.87
H3F3C-201ENST00000340398 ANAPC11Q9NYG5 84 aa9.64□□□□□ -0.87
H3F3C-201ENST00000340398 ORMDL2Q53FV1 153 aa9.63□□□□□ -0.87
H3F3C-201ENST00000340398 RPL37AP8A6NKH3 93 aa9.62□□□□□ -0.87
H3F3C-201ENST00000340398 LCE2BO14633 110 aa9.62□□□□□ -0.87
H3F3C-201ENST00000340398 MRPL55Q7Z7F7 128 aaKnown RBP9.62□□□□□ -0.87
H3F3C-201ENST00000340398 F8VRH5 84 aa9.61□□□□□ -0.87
H3F3C-201ENST00000340398 BCE1O60756 84 aa9.61□□□□□ -0.87
H3F3C-201ENST00000340398 HERVK_113P63121 156 aa9.61□□□□□ -0.87
H3F3C-201ENST00000340398 LINC00167Q96N53 147 aa9.61□□□□□ -0.87
H3F3C-201ENST00000340398 GEMIN7Q9H840 131 aaKnown RBP9.61□□□□□ -0.87
H3F3C-201ENST00000340398 GAGE10A6NGK3 116 aa9.6□□□□□ -0.87
H3F3C-201ENST00000340398 NPSP0C0P6 89 aa9.6□□□□□ -0.87
H3F3C-201ENST00000340398 S100A1P23297 94 aa9.6□□□□□ -0.87
H3F3C-201ENST00000340398 RPL28P46779 137 aaKnown RBP9.6□□□□□ -0.87
H3F3C-201ENST00000340398 TYMSOSQ8TAI1 123 aa9.6□□□□□ -0.87
H3F3C-201ENST00000340398 TP73-AS1Q9UF72 201 aa9.6□□□□□ -0.87
H3F3C-201ENST00000340398 MT-ND4LP03901 98 aa9.58□□□□□ -0.88
H3F3C-201ENST00000340398 CRYGAP11844 174 aa9.58□□□□□ -0.88
H3F3C-201ENST00000340398 KIAA1644Q3SXP7 199 aa9.58□□□□□ -0.88
H3F3C-201ENST00000340398 ANAPC16Q96DE5 110 aa9.58□□□□□ -0.88
H3F3C-201ENST00000340398 NXT2Q9NPJ8 142 aaKnown RBP9.58□□□□□ -0.88
H3F3C-201ENST00000340398 K7EMI3 77 aa9.57□□□□□ -0.88
H3F3C-201ENST00000340398 ADCYAP1P18509 176 aa9.57□□□□□ -0.88
H3F3C-201ENST00000340398 RAB5BP61020 215 aa9.57□□□□□ -0.88
H3F3C-201ENST00000340398 SEC11AP67812 179 aa9.57□□□□□ -0.88
H3F3C-201ENST00000340398 TOMM6Q96B49 74 aa9.57□□□□□ -0.88
H3F3C-201ENST00000340398 SMIM1B2RUZ4 78 aa9.56□□□□□ -0.88
H3F3C-201ENST00000340398 IFITM2Q01629 132 aa9.56□□□□□ -0.88
H3F3C-201ENST00000340398 KRTAP13-2Q52LG2 175 aa9.56□□□□□ -0.88
H3F3C-201ENST00000340398 TIMM17AQ99595 171 aa9.56□□□□□ -0.88
H3F3C-201ENST00000340398 PNRC1Q12796 327 aaPredicted RBP9.55□□□□□ -0.88
H3F3C-201ENST00000340398 PAPPA-AS1Q5QFB9 102 aa9.55□□□□□ -0.88
H3F3C-201ENST00000340398 COX7B2Q8TF08 81 aa9.55□□□□□ -0.88
H3F3C-201ENST00000340398 SCGB3A1Q96QR1 104 aa9.55□□□□□ -0.88
H3F3C-201ENST00000340398 SCO1O75880 301 aa9.54□□□□□ -0.88
H3F3C-201ENST00000340398 CXCL5P42830 114 aa9.54□□□□□ -0.88
H3F3C-201ENST00000340398 ERASQ7Z444 233 aa9.54□□□□□ -0.88
H3F3C-201ENST00000340398 RETNLBQ9BQ08 111 aa9.54□□□□□ -0.88
H3F3C-201ENST00000340398 KRTAP9-2Q9BYQ4 174 aa9.54□□□□□ -0.88
H3F3C-201ENST00000340398 A6NJY4 79 aa9.53□□□□□ -0.88
H3F3C-201ENST00000340398 G0S2P27469 103 aa9.53□□□□□ -0.88
H3F3C-201ENST00000340398 PDZD11Q5EBL8 140 aa9.53□□□□□ -0.88
H3F3C-201ENST00000340398 KRTAP13-1Q8IUC0 172 aa9.53□□□□□ -0.88
H3F3C-201ENST00000340398 A0A0U1RQV1 116 aa9.52□□□□□ -0.89
H3F3C-201ENST00000340398 TINCRA0A1B0GVN0 87 aa9.52□□□□□ -0.89
H3F3C-201ENST00000340398 SPINK8P0C7L1 97 aa9.52□□□□□ -0.89
H3F3C-201ENST00000340398 UBE2AP49459 152 aa9.51□□□□□ -0.89
H3F3C-201ENST00000340398 CST9LQ9H4G1 147 aa9.51□□□□□ -0.89
H3F3C-201ENST00000340398 IGLV5-37A0A075B6J1 123 aa9.5□□□□□ -0.89
H3F3C-201ENST00000340398 IGLV5-45A0A087WSX0 123 aa9.5□□□□□ -0.89
H3F3C-201ENST00000340398 IGKV2-28A0A075B6P5 120 aa9.49□□□□□ -0.89
H3F3C-201ENST00000340398 IGKV2D-28P01615 120 aa9.49□□□□□ -0.89
H3F3C-201ENST00000340398 LCE2AQ5TA79 106 aaPredicted RBP9.49□□□□□ -0.89
H3F3C-201ENST00000340398 NKAPP1Q8N9T2 125 aa9.49□□□□□ -0.89
H3F3C-201ENST00000340398 MUC17Q685J3 4493 aa9.48□□□□□ -0.89
H3F3C-201ENST00000340398 FAT4Q6V0I7 4981 aa9.47□□□□□ -0.89
H3F3C-201ENST00000340398 LINC00304Q8N9R0 145 aa9.47□□□□□ -0.89
H3F3C-201ENST00000340398 PFN2P35080 140 aa9.46□□□□□ -0.9
H3F3C-201ENST00000340398 PRLHP81277 87 aa9.46□□□□□ -0.9
H3F3C-201ENST00000340398 LINC01546A6NGU7 62 aa9.45□□□□□ -0.9
H3F3C-201ENST00000340398 TMEM238C9JI98 176 aa9.45□□□□□ -0.9
H3F3C-201ENST00000340398 PMVKQ15126 192 aa9.45□□□□□ -0.9
H3F3C-201ENST00000340398 FAM229BQ4G0N7 80 aa9.45□□□□□ -0.9
H3F3C-201ENST00000340398 IGKV2D-26A0A0A0MRZ7 120 aa9.44□□□□□ -0.9
H3F3C-201ENST00000340398 ATP5LO75964 103 aa9.43□□□□□ -0.9
H3F3C-201ENST00000340398 RAB14P61106 215 aa9.43□□□□□ -0.9
H3F3C-201ENST00000340398 SLC7A5P1Q8MH63 180 aa9.43□□□□□ -0.9
H3F3C-201ENST00000340398 MRPL18Q9H0U6 180 aaKnown RBP9.43□□□□□ -0.9
H3F3C-201ENST00000340398 CDIP1Q9H305 208 aa9.43□□□□□ -0.9
H3F3C-201ENST00000340398 IGLV7-46A0A075B6I9 117 aa9.42□□□□□ -0.9
H3F3C-201ENST00000340398 VPREB1P12018 145 aa9.42□□□□□ -0.9
H3F3C-201ENST00000340398 FAM19A1Q7Z5A9 133 aa9.42□□□□□ -0.9
H3F3C-201ENST00000340398 Q8NDZ9 215 aa9.42□□□□□ -0.9
H3F3C-201ENST00000340398 SND1-IT1Q9HBX3 110 aa9.42□□□□□ -0.9
H3F3C-201ENST00000340398 C3orf22Q8N5N4 141 aa9.41□□□□□ -0.9
H3F3C-201ENST00000340398 TMEM126AQ9H061 195 aa9.41□□□□□ -0.9
H3F3C-201ENST00000340398 IGLV5-39A0A0G2JS06 123 aa9.4□□□□□ -0.9
H3F3C-201ENST00000340398 H3BRM9 83 aa9.4□□□□□ -0.9
H3F3C-201ENST00000340398 M0R378 163 aa9.4□□□□□ -0.9
H3F3C-201ENST00000340398 PLEKHB2Q96CS7 222 aa9.4□□□□□ -0.9
H3F3C-201ENST00000340398 ZNF625Q96I27 306 aaPredicted RBP9.4□□□□□ -0.9
H3F3C-201ENST00000340398 GNB1LQ9BYB4 327 aa9.4□□□□□ -0.9
H3F3C-201ENST00000340398 LINC01549A6NIU2 74 aa9.39□□□□□ -0.91
H3F3C-201ENST00000340398 NDUFA6P56556 154 aa9.39□□□□□ -0.91
H3F3C-201ENST00000340398 TPRXLQ17RH7 258 aa9.39□□□□□ -0.91
H3F3C-201ENST00000340398 CLLU1Q5K131 121 aa9.39□□□□□ -0.91
H3F3C-201ENST00000340398 FA2HQ7L5A8 372 aa9.39□□□□□ -0.91
H3F3C-201ENST00000340398 TRAV9-1A0A075B6T8 112 aa9.38□□□□□ -0.91
H3F3C-201ENST00000340398 IGLC3P0DOY3 106 aa9.38□□□□□ -0.91
H3F3C-201ENST00000340398 ZNF22P17026 224 aaPredicted RBP9.38□□□□□ -0.91
H3F3C-201ENST00000340398 ERG28Q9UKR5 140 aa9.38□□□□□ -0.91
H3F3C-201ENST00000340398 FABP9Q0Z7S8 132 aa9.37□□□□□ -0.91
H3F3C-201ENST00000340398 SMCO4Q9NRQ5 59 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms