RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 SLURP1P55000 103 aa6.54□□□□□ -1.36
NECAP1-201ENST00000339754 LINC00482Q8N8I6 264 aa6.54□□□□□ -1.36
NECAP1-201ENST00000339754 C1orf43Q9BWL3 253 aa6.54□□□□□ -1.36
NECAP1-201ENST00000339754 SNURFQ9Y675 71 aa6.54□□□□□ -1.36
NECAP1-201ENST00000339754 RPL35AP18077 110 aaKnown RBP6.53□□□□□ -1.36
NECAP1-201ENST00000339754 Q6ZQT0 140 aa6.53□□□□□ -1.36
NECAP1-201ENST00000339754 TMEM86BQ8N661 226 aa6.53□□□□□ -1.36
NECAP1-201ENST00000339754 UBE2E2Q96LR5 201 aa6.53□□□□□ -1.36
NECAP1-201ENST00000339754 FBN2P35556 2912 aa6.53□□□□□ -1.36
NECAP1-201ENST00000339754 M0R2N4 97 aa6.53□□□□□ -1.36
NECAP1-201ENST00000339754 MSMBP08118 114 aa6.53□□□□□ -1.36
NECAP1-201ENST00000339754 LINC01547P58512 204 aaPredicted RBP6.53□□□□□ -1.36
NECAP1-201ENST00000339754 UBR5O95071 2799 aaPredicted RBP6.52□□□□□ -1.37
NECAP1-201ENST00000339754 F8WEM9 126 aa6.52□□□□□ -1.37
NECAP1-201ENST00000339754 LOC100131303A0A0U1RQF7 123 aa6.52□□□□□ -1.37
NECAP1-201ENST00000339754 C18orf65Q6ZTR6 163 aa6.52□□□□□ -1.37
NECAP1-201ENST00000339754 MAPK1IP1LQ8NDC0 245 aa6.52□□□□□ -1.37
NECAP1-201ENST00000339754 LINC00474Q9P2X8 69 aa6.52□□□□□ -1.37
NECAP1-201ENST00000339754 DEFB136Q30KP8 78 aa6.51□□□□□ -1.37
NECAP1-201ENST00000339754 C6orf226Q5I0X4 101 aa6.51□□□□□ -1.37
NECAP1-201ENST00000339754 WFDC11Q8NEX6 87 aa6.51□□□□□ -1.37
NECAP1-201ENST00000339754 C2CD3Q4AC94 2353 aa6.51□□□□□ -1.37
NECAP1-201ENST00000339754 EPG5Q9HCE0 2579 aa6.51□□□□□ -1.37
NECAP1-201ENST00000339754 LOC110117498A0A087WWA1 95 aa6.51□□□□□ -1.37
NECAP1-201ENST00000339754 RNASE1P07998 156 aaKnown RBP6.51□□□□□ -1.37
NECAP1-201ENST00000339754 DEFB112Q30KQ8 113 aa6.51□□□□□ -1.37
NECAP1-201ENST00000339754 C11orf68Q9H3H3 251 aaKnown RBP6.51□□□□□ -1.37
NECAP1-201ENST00000339754 PKIGQ9Y2B9 76 aa6.51□□□□□ -1.37
NECAP1-201ENST00000339754 FAM208BQ5VWN6 2430 aa6.51□□□□□ -1.37
NECAP1-201ENST00000339754 CENPEQ02224 2701 aa6.51□□□□□ -1.37
NECAP1-201ENST00000339754 TRBV7-6A0A0J9YX20 115 aa6.5□□□□□ -1.37
NECAP1-201ENST00000339754 F8WDY8 70 aa6.5□□□□□ -1.37
NECAP1-201ENST00000339754 KRTAP10-9P60411 292 aa6.5□□□□□ -1.37
NECAP1-201ENST00000339754 CSPG4Q6UVK1 2322 aa6.5□□□□□ -1.37
NECAP1-201ENST00000339754 B4DSR2 109 aa6.5□□□□□ -1.37
NECAP1-201ENST00000339754 RBM3P98179 157 aaKnown RBP6.5□□□□□ -1.37
NECAP1-201ENST00000339754 Q6ZVQ6 151 aa6.5□□□□□ -1.37
NECAP1-201ENST00000339754 LRRK2Q5S007 2527 aa6.5□□□□□ -1.37
NECAP1-201ENST00000339754 DSCR9P59020 149 aa6.49□□□□□ -1.37
NECAP1-201ENST00000339754 HAMPP81172 84 aa6.49□□□□□ -1.37
NECAP1-201ENST00000339754 POLQO75417 2590 aa6.49□□□□□ -1.37
NECAP1-201ENST00000339754 LINC00959A0A1B0GUT2 108 aa6.49□□□□□ -1.37
NECAP1-201ENST00000339754 C6orf223Q8N319 242 aa6.49□□□□□ -1.37
NECAP1-201ENST00000339754 DEFB114Q30KQ6 69 aa6.48□□□□□ -1.37
NECAP1-201ENST00000339754 LINC00575Q6W349 94 aa6.48□□□□□ -1.37
NECAP1-201ENST00000339754 NOP10Q9NPE3 64 aaKnown RBP6.48□□□□□ -1.37
NECAP1-201ENST00000339754 TRBV6-8A0A0A6YYG3 113 aa6.48□□□□□ -1.37
NECAP1-201ENST00000339754 A0A1W2PRX2 142 aa6.48□□□□□ -1.37
NECAP1-201ENST00000339754 C6orf99Q4VX62 202 aa6.48□□□□□ -1.37
NECAP1-201ENST00000339754 TRBV7-4A0A0J9YYF1 115 aa6.47□□□□□ -1.37
NECAP1-201ENST00000339754 NDUFC1O43677 76 aa6.47□□□□□ -1.37
NECAP1-201ENST00000339754 CXCL6P80162 114 aa6.47□□□□□ -1.37
NECAP1-201ENST00000339754 ODF3L2Q3SX64 289 aa6.47□□□□□ -1.37
NECAP1-201ENST00000339754 LINC01356Q8N9X3 169 aa6.47□□□□□ -1.37
NECAP1-201ENST00000339754 TM2D3Q9BRN9 247 aa6.47□□□□□ -1.37
NECAP1-201ENST00000339754 ZNF702PQ9H963 129 aa6.47□□□□□ -1.37
NECAP1-201ENST00000339754 ZNF561-AS1K7EIQ3 104 aa6.47□□□□□ -1.37
NECAP1-201ENST00000339754 Q8IZM0 81 aa6.47□□□□□ -1.37
NECAP1-201ENST00000339754 Q8N3U1 123 aa6.47□□□□□ -1.37
NECAP1-201ENST00000339754 ANKRD17O75179 2603 aaKnown RBP6.46□□□□□ -1.37
NECAP1-201ENST00000339754 Q8NDZ9 215 aa6.46□□□□□ -1.38
NECAP1-201ENST00000339754 PLAC8L1A1L4L8 177 aa6.45□□□□□ -1.38
NECAP1-201ENST00000339754 STHQ8IWL8 128 aa6.45□□□□□ -1.38
NECAP1-201ENST00000339754 C11orf44Q8N8P7 122 aa6.45□□□□□ -1.38
NECAP1-201ENST00000339754 DYNLRB2Q8TF09 96 aa6.45□□□□□ -1.38
NECAP1-201ENST00000339754 ZANQ9Y493 2812 aa6.45□□□□□ -1.38
NECAP1-201ENST00000339754 MIFP14174 115 aa6.45□□□□□ -1.38
NECAP1-201ENST00000339754 C9orf66Q5T8R8 295 aa6.45□□□□□ -1.38
NECAP1-201ENST00000339754 LAMTOR3Q9UHA4 124 aa6.45□□□□□ -1.38
NECAP1-201ENST00000339754 ATP5EP56381 51 aaPredicted RBP6.44□□□□□ -1.38
NECAP1-201ENST00000339754 SPATA3Q8NHX4 192 aa6.44□□□□□ -1.38
NECAP1-201ENST00000339754 TRGV2A0A075B6R0 118 aa6.44□□□□□ -1.38
NECAP1-201ENST00000339754 FAM229BQ4G0N7 80 aa6.44□□□□□ -1.38
NECAP1-201ENST00000339754 BRK1Q8WUW1 75 aa6.44□□□□□ -1.38
NECAP1-201ENST00000339754 USP9YO00507 2555 aaPredicted RBP6.44□□□□□ -1.38
NECAP1-201ENST00000339754 ABCA12Q86UK0 2595 aa6.43□□□□□ -1.38
NECAP1-201ENST00000339754 KIAA0087Q14695 138 aa6.43□□□□□ -1.38
NECAP1-201ENST00000339754 DEFB113Q30KQ7 82 aa6.43□□□□□ -1.38
NECAP1-201ENST00000339754 COX17Q14061 63 aa6.43□□□□□ -1.38
NECAP1-201ENST00000339754 PTPN13Q12923 2485 aa6.43□□□□□ -1.38
NECAP1-201ENST00000339754 NOTCH3Q9UM47 2321 aa6.42□□□□□ -1.38
NECAP1-201ENST00000339754 NBPF19A0A087WUL8 3843 aa6.42□□□□□ -1.38
NECAP1-201ENST00000339754 TRGV4A0A0C4DH28 118 aa6.42□□□□□ -1.38
NECAP1-201ENST00000339754 A0A0U1RQV1 116 aa6.42□□□□□ -1.38
NECAP1-201ENST00000339754 GIG44P09565 113 aaPredicted RBP6.42□□□□□ -1.38
NECAP1-201ENST00000339754 IGHV4-31P0DP07 118 aa6.42□□□□□ -1.38
NECAP1-201ENST00000339754 PLA2G2AP14555 144 aa6.42□□□□□ -1.38
NECAP1-201ENST00000339754 PDE6GP18545 87 aa6.42□□□□□ -1.38
NECAP1-201ENST00000339754 TENM4Q6N022 2769 aa6.42□□□□□ -1.38
NECAP1-201ENST00000339754 NREPQ16612 68 aa6.42□□□□□ -1.38
NECAP1-201ENST00000339754 C9orf116Q5BN46 136 aaPredicted RBP6.42□□□□□ -1.38
NECAP1-201ENST00000339754 KHDC1LQ5JSQ8 128 aa6.42□□□□□ -1.38
NECAP1-201ENST00000339754 LCE2AQ5TA79 106 aaPredicted RBP6.42□□□□□ -1.38
NECAP1-201ENST00000339754 C1orf195Q5TG92 126 aa6.41□□□□□ -1.38
NECAP1-201ENST00000339754 SCXQ7RTU7 201 aa6.41□□□□□ -1.38
NECAP1-201ENST00000339754 MUC7Q8TAX7 377 aa6.41□□□□□ -1.38
NECAP1-201ENST00000339754 TMEM254Q8TBM7 123 aa6.41□□□□□ -1.38
NECAP1-201ENST00000339754 NAV2Q8IVL1 2488 aa6.4□□□□□ -1.38
NECAP1-201ENST00000339754 IGHV4-28A0A0C4DH34 117 aa6.4□□□□□ -1.38
NECAP1-201ENST00000339754 ERC2-IT1O76042 136 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms