RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 H3BRM9 83 aa8.19□□□□□ -1.1
SRSF3-201ENST00000339436 PRSS2P07478 247 aa8.19□□□□□ -1.1
SRSF3-201ENST00000339436 RNF151Q2KHN1 245 aa8.19□□□□□ -1.1
SRSF3-201ENST00000339436 C10orf25Q5T742 122 aa8.19□□□□□ -1.1
SRSF3-201ENST00000339436 C2orf82Q6UX34 121 aa8.19□□□□□ -1.1
SRSF3-201ENST00000339436 TOMM7Q9P0U1 55 aa8.19□□□□□ -1.1
SRSF3-201ENST00000339436 HSPB8Q9UJY1 196 aa8.19□□□□□ -1.1
SRSF3-201ENST00000339436 CHTOPQ9Y3Y2 248 aaKnown RBP8.19□□□□□ -1.1
SRSF3-201ENST00000339436 IGKV2-24A0A0C4DH68 120 aa8.19□□□□□ -1.1
SRSF3-201ENST00000339436 SPINK8P0C7L1 97 aa8.19□□□□□ -1.1
SRSF3-201ENST00000339436 UNQ6190/PRO20217Q6UXQ8 127 aa8.19□□□□□ -1.1
SRSF3-201ENST00000339436 C6orf48Q9UBA6 75 aa8.19□□□□□ -1.1
SRSF3-201ENST00000339436 SRRM2Q9UQ35 2752 aaKnown RBP8.18□□□□□ -1.1
SRSF3-201ENST00000339436 LOC107984640A0A0U1RRK4 108 aa8.18□□□□□ -1.1
SRSF3-201ENST00000339436 F8VRH5 84 aa8.18□□□□□ -1.1
SRSF3-201ENST00000339436 COA6Q5JTJ3 125 aaKnown RBP8.18□□□□□ -1.1
SRSF3-201ENST00000339436 PCLOQ9Y6V0 5065 aa8.17□□□□□ -1.1
SRSF3-201ENST00000339436 TRBV30A0A0K0K1B3 111 aa8.17□□□□□ -1.1
SRSF3-201ENST00000339436 SMR3BP02814 79 aaPredicted RBP8.17□□□□□ -1.1
SRSF3-201ENST00000339436 FABP4P15090 132 aa8.17□□□□□ -1.1
SRSF3-201ENST00000339436 CXCL5P42830 114 aa8.17□□□□□ -1.1
SRSF3-201ENST00000339436 PTTG1IPP53801 180 aa8.17□□□□□ -1.1
SRSF3-201ENST00000339436 CKS1BP61024 79 aa8.17□□□□□ -1.1
SRSF3-201ENST00000339436 ODF1Q14990 250 aa8.17□□□□□ -1.1
SRSF3-201ENST00000339436 LINC00474Q9P2X8 69 aa8.17□□□□□ -1.1
SRSF3-201ENST00000339436 IGLV5-39A0A0G2JS06 123 aa8.16□□□□□ -1.1
SRSF3-201ENST00000339436 H0Y8G0 127 aa8.16□□□□□ -1.1
SRSF3-201ENST00000339436 MAJINQ3KP22 176 aa8.16□□□□□ -1.1
SRSF3-201ENST00000339436 C6orf226Q5I0X4 101 aa8.16□□□□□ -1.1
SRSF3-201ENST00000339436 COX7B2Q8TF08 81 aa8.16□□□□□ -1.1
SRSF3-201ENST00000339436 A0A087WYN8 130 aa8.15□□□□□ -1.1
SRSF3-201ENST00000339436 TLX1NBP0CAT3 122 aa8.15□□□□□ -1.1
SRSF3-201ENST00000339436 RPL18AQ02543 176 aaKnown RBP8.15□□□□□ -1.1
SRSF3-201ENST00000339436 TMEM170BQ5T4T1 132 aa8.15□□□□□ -1.1
SRSF3-201ENST00000339436 Q5VSD8 79 aa8.15□□□□□ -1.1
SRSF3-201ENST00000339436 GAGE2BQ13066 116 aa8.14□□□□□ -1.11
SRSF3-201ENST00000339436 LINC00528Q8N1L1 170 aa8.14□□□□□ -1.11
SRSF3-201ENST00000339436 KRTAP4-5Q9BYR2 181 aa8.14□□□□□ -1.11
SRSF3-201ENST00000339436 PLAC8Q9NZF1 115 aa8.14□□□□□ -1.11
SRSF3-201ENST00000339436 EPM2AB3EWF7 344 aa8.13□□□□□ -1.11
SRSF3-201ENST00000339436 NDUFC2-KCTD14E9PQ53 114 aa8.13□□□□□ -1.11
SRSF3-201ENST00000339436 C9orf116Q5BN46 136 aaPredicted RBP8.13□□□□□ -1.11
SRSF3-201ENST00000339436 Q6ZRP5 223 aa8.13□□□□□ -1.11
SRSF3-201ENST00000339436 STPG4Q8N801 248 aa8.13□□□□□ -1.11
SRSF3-201ENST00000339436 DPH3Q96FX2 82 aa8.13□□□□□ -1.11
SRSF3-201ENST00000339436 MAP1LC3CQ9BXW4 147 aa8.13□□□□□ -1.11
SRSF3-201ENST00000339436 TMEM223A0PJW6 202 aa8.12□□□□□ -1.11
SRSF3-201ENST00000339436 PLNP26678 52 aa8.12□□□□□ -1.11
SRSF3-201ENST00000339436 FAM229AH3BQW9 127 aa8.11□□□□□ -1.11
SRSF3-201ENST00000339436 FLG2Q5D862 2391 aaPredicted RBP8.11□□□□□ -1.11
SRSF3-201ENST00000339436 DPM2O94777 84 aa8.1□□□□□ -1.11
SRSF3-201ENST00000339436 PMCHL2Q9BQD1 86 aa8.1□□□□□ -1.11
SRSF3-201ENST00000339436 SYS1-DBNDD2H3BUS1 97 aa8.09□□□□□ -1.11
SRSF3-201ENST00000339436 GAGE2EQ4V326 116 aa8.09□□□□□ -1.11
SRSF3-201ENST00000339436 GAGE2DQ9UEU5 116 aa8.09□□□□□ -1.11
SRSF3-201ENST00000339436 MYCBP2O75592 4640 aa8.08□□□□□ -1.12
SRSF3-201ENST00000339436 IGKCP01834 107 aa8.08□□□□□ -1.12
SRSF3-201ENST00000339436 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
SRSF3-201ENST00000339436 SFTA2Q6UW10 78 aa8.08□□□□□ -1.12
SRSF3-201ENST00000339436 ZNF625Q96I27 306 aaPredicted RBP8.08□□□□□ -1.12
SRSF3-201ENST00000339436 A0A1W2PNN7 141 aa8.07□□□□□ -1.12
SRSF3-201ENST00000339436 LINC01545Q5VT33 79 aa8.07□□□□□ -1.12
SRSF3-201ENST00000339436 PKHD1L1Q86WI1 4243 aa8.06□□□□□ -1.12
SRSF3-201ENST00000339436 C3orf79P0CE67 100 aa8.06□□□□□ -1.12
SRSF3-201ENST00000339436 KRTAP10-4P60372 401 aaPredicted RBP8.06□□□□□ -1.12
SRSF3-201ENST00000339436 C9orf129Q5T035 196 aaKnown RBP8.06□□□□□ -1.12
SRSF3-201ENST00000339436 PET117Q6UWS5 81 aa8.06□□□□□ -1.12
SRSF3-201ENST00000339436 FAM168BA1KXE4 195 aa8.05□□□□□ -1.12
SRSF3-201ENST00000339436 RPL37AP61513 92 aaKnown RBP8.05□□□□□ -1.12
SRSF3-201ENST00000339436 C7orf33Q8WU49 177 aa8.05□□□□□ -1.12
SRSF3-201ENST00000339436 KRTDAPP60985 99 aa8.04□□□□□ -1.12
SRSF3-201ENST00000339436 HERVK_113P61574 105 aa8.04□□□□□ -1.12
SRSF3-201ENST00000339436 HIST3H2BBQ8N257 126 aa8.04□□□□□ -1.12
SRSF3-201ENST00000339436 XAGE1AQ9HD64 81 aa8.04□□□□□ -1.12
SRSF3-201ENST00000339436 ERG28Q9UKR5 140 aa8.04□□□□□ -1.12
SRSF3-201ENST00000339436 S100A6P06703 90 aa8.03□□□□□ -1.12
SRSF3-201ENST00000339436 TSPEAR-AS2P59090 65 aa8.03□□□□□ -1.12
SRSF3-201ENST00000339436 FAM19A5Q7Z5A7 132 aaPredicted RBP8.03□□□□□ -1.12
SRSF3-201ENST00000339436 KRTAP7-1Q8IUC3 87 aa8.03□□□□□ -1.12
SRSF3-201ENST00000339436 LEPROTO15243 131 aa8.03□□□□□ -1.12
SRSF3-201ENST00000339436 PLEKHB2Q96CS7 222 aa8.03□□□□□ -1.12
SRSF3-201ENST00000339436 PFN2P35080 140 aa8.02□□□□□ -1.13
SRSF3-201ENST00000339436 COX17Q14061 63 aa8.02□□□□□ -1.13
SRSF3-201ENST00000339436 HIST1H2BLQ99880 126 aa8.02□□□□□ -1.13
SRSF3-201ENST00000339436 NDUFA12Q9UI09 145 aa8.02□□□□□ -1.13
SRSF3-201ENST00000339436 J3QQQ9 107 aa8.01□□□□□ -1.13
SRSF3-201ENST00000339436 M0QXV9 152 aa8.01□□□□□ -1.13
SRSF3-201ENST00000339436 S100A2P29034 98 aa8.01□□□□□ -1.13
SRSF3-201ENST00000339436 C4orf48Q5BLP8 95 aa8.01□□□□□ -1.13
SRSF3-201ENST00000339436 PHF5AQ7RTV0 110 aaKnown RBP8.01□□□□□ -1.13
SRSF3-201ENST00000339436 C20orf202A1L168 122 aa8□□□□□ -1.13
SRSF3-201ENST00000339436 E9PLD3 99 aa8□□□□□ -1.13
SRSF3-201ENST00000339436 HERV-K104P63124 156 aa8□□□□□ -1.13
SRSF3-201ENST00000339436 PRR3P79522 188 aaKnown RBP8□□□□□ -1.13
SRSF3-201ENST00000339436 SERTAD4-AS1Q5TG53 156 aa8□□□□□ -1.13
SRSF3-201ENST00000339436 MYMXA0A1B0GTQ4 84 aa7.99□□□□□ -1.13
SRSF3-201ENST00000339436 INAFM2P0DMQ5 153 aa7.99□□□□□ -1.13
SRSF3-201ENST00000339436 SND1-IT1Q9HBX3 110 aa7.99□□□□□ -1.13
SRSF3-201ENST00000339436 LRP1Q07954 4544 aaKnown RBP7.99□□□□□ -1.13
SRSF3-201ENST00000339436 LGALS3P17931 250 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms