RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 COX7B2Q8TF08 81 aa7.69□□□□□ -1.18
SPTLC1-202ENST00000337841 DPH3Q96FX2 82 aa7.69□□□□□ -1.18
SPTLC1-202ENST00000337841 CXCL5P42830 114 aa7.68□□□□□ -1.18
SPTLC1-202ENST00000337841 KRTDAPP60985 99 aa7.68□□□□□ -1.18
SPTLC1-202ENST00000337841 UNQ6190/PRO20217Q6UXQ8 127 aa7.68□□□□□ -1.18
SPTLC1-202ENST00000337841 PKD1P98161 4303 aa7.67□□□□□ -1.18
SPTLC1-202ENST00000337841 IGKCP01834 107 aa7.67□□□□□ -1.18
SPTLC1-202ENST00000337841 SNRPEP62304 92 aaKnown RBP7.67□□□□□ -1.18
SPTLC1-202ENST00000337841 HIST3H2BBQ8N257 126 aa7.67□□□□□ -1.18
SPTLC1-202ENST00000337841 DNAH11Q96DT5 4516 aa7.66□□□□□ -1.18
SPTLC1-202ENST00000337841 IGLV5-39A0A0G2JS06 123 aa7.66□□□□□ -1.18
SPTLC1-202ENST00000337841 TRBV30A0A0K0K1B3 111 aa7.66□□□□□ -1.18
SPTLC1-202ENST00000337841 LOC107984640A0A0U1RRK4 108 aa7.66□□□□□ -1.18
SPTLC1-202ENST00000337841 TMEM223A0PJW6 202 aa7.66□□□□□ -1.18
SPTLC1-202ENST00000337841 C20orf202A1L168 122 aa7.66□□□□□ -1.18
SPTLC1-202ENST00000337841 CDK2AP2O75956 126 aa7.66□□□□□ -1.18
SPTLC1-202ENST00000337841 C3orf79P0CE67 100 aa7.66□□□□□ -1.18
SPTLC1-202ENST00000337841 C10orf25Q5T742 122 aa7.66□□□□□ -1.18
SPTLC1-202ENST00000337841 C2orf82Q6UX34 121 aa7.66□□□□□ -1.18
SPTLC1-202ENST00000337841 PMCHL2Q9BQD1 86 aa7.66□□□□□ -1.18
SPTLC1-202ENST00000337841 HERVK_113P61574 105 aa7.65□□□□□ -1.18
SPTLC1-202ENST00000337841 FAM30AQ9NZY2 134 aa7.65□□□□□ -1.18
SPTLC1-202ENST00000337841 LINC00474Q9P2X8 69 aa7.65□□□□□ -1.18
SPTLC1-202ENST00000337841 EPPK1P58107 5090 aaKnown RBP7.65□□□□□ -1.19
SPTLC1-202ENST00000337841 C5orf52A6NGY3 159 aa7.64□□□□□ -1.19
SPTLC1-202ENST00000337841 AKR1D1P51857 326 aa7.64□□□□□ -1.19
SPTLC1-202ENST00000337841 LINC01545Q5VT33 79 aa7.64□□□□□ -1.19
SPTLC1-202ENST00000337841 SFTA2Q6UW10 78 aa7.64□□□□□ -1.19
SPTLC1-202ENST00000337841 HIST1H2BLQ99880 126 aa7.64□□□□□ -1.19
SPTLC1-202ENST00000337841 C6orf48Q9UBA6 75 aa7.64□□□□□ -1.19
SPTLC1-202ENST00000337841 GAGE2BQ13066 116 aa7.63□□□□□ -1.19
SPTLC1-202ENST00000337841 Q6ZSA8 131 aa7.63□□□□□ -1.19
SPTLC1-202ENST00000337841 HECTD4Q9Y4D8 3996 aa7.62□□□□□ -1.19
SPTLC1-202ENST00000337841 IGKV2-24A0A0C4DH68 120 aa7.62□□□□□ -1.19
SPTLC1-202ENST00000337841 TLX1NBP0CAT3 122 aa7.62□□□□□ -1.19
SPTLC1-202ENST00000337841 XGP55808 180 aa7.62□□□□□ -1.19
SPTLC1-202ENST00000337841 PLEKHB2Q96CS7 222 aa7.62□□□□□ -1.19
SPTLC1-202ENST00000337841 LEPROTO15243 131 aa7.61□□□□□ -1.19
SPTLC1-202ENST00000337841 PTTG1IPP53801 180 aa7.61□□□□□ -1.19
SPTLC1-202ENST00000337841 RPL18AQ02543 176 aaKnown RBP7.61□□□□□ -1.19
SPTLC1-202ENST00000337841 MAJINQ3KP22 176 aa7.61□□□□□ -1.19
SPTLC1-202ENST00000337841 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.61□□□□□ -1.19
SPTLC1-202ENST00000337841 A0A096LNI7 61 aa7.6□□□□□ -1.19
SPTLC1-202ENST00000337841 LOC100996750A0A140TA64 210 aa7.6□□□□□ -1.19
SPTLC1-202ENST00000337841 NDUFC2-KCTD14E9PQ53 114 aa7.6□□□□□ -1.19
SPTLC1-202ENST00000337841 CHTF8P0CG12 524 aa7.6□□□□□ -1.19
SPTLC1-202ENST00000337841 CIRBPQ14011 172 aaKnown RBP7.6□□□□□ -1.19
SPTLC1-202ENST00000337841 C9orf116Q5BN46 136 aaPredicted RBP7.6□□□□□ -1.19
SPTLC1-202ENST00000337841 KRTAP4-6Q9BYQ5 205 aa7.6□□□□□ -1.19
SPTLC1-202ENST00000337841 DYNC1H1Q14204 4646 aaKnown RBP7.59□□□□□ -1.19
SPTLC1-202ENST00000337841 EIF4EBP3O60516 100 aaPredicted RBP7.59□□□□□ -1.19
SPTLC1-202ENST00000337841 GAGE2EQ4V326 116 aa7.59□□□□□ -1.19
SPTLC1-202ENST00000337841 CIRBP-AS1Q8TBR5 109 aa7.59□□□□□ -1.19
SPTLC1-202ENST00000337841 SPACA4Q8TDM5 124 aa7.59□□□□□ -1.19
SPTLC1-202ENST00000337841 GAGE2DQ9UEU5 116 aa7.59□□□□□ -1.19
SPTLC1-202ENST00000337841 BIRC6Q9NR09 4857 aa7.59□□□□□ -1.19
SPTLC1-202ENST00000337841 A0A087WYN8 130 aa7.58□□□□□ -1.2
SPTLC1-202ENST00000337841 MYMXA0A1B0GTQ4 84 aa7.58□□□□□ -1.2
SPTLC1-202ENST00000337841 LINC00587B1AMM8 73 aa7.58□□□□□ -1.2
SPTLC1-202ENST00000337841 PANO1I0J062 215 aa7.58□□□□□ -1.2
SPTLC1-202ENST00000337841 J3QQQ9 107 aa7.58□□□□□ -1.2
SPTLC1-202ENST00000337841 LGALS3P17931 250 aaKnown RBP7.58□□□□□ -1.2
SPTLC1-202ENST00000337841 HERV-K104P63124 156 aa7.58□□□□□ -1.2
SPTLC1-202ENST00000337841 Q6ZRP5 223 aa7.58□□□□□ -1.2
SPTLC1-202ENST00000337841 SCXQ7RTU7 201 aa7.58□□□□□ -1.2
SPTLC1-202ENST00000337841 STPG4Q8N801 248 aa7.58□□□□□ -1.2
SPTLC1-202ENST00000337841 NDUFA12Q9UI09 145 aa7.58□□□□□ -1.2
SPTLC1-202ENST00000337841 E9PLD3 99 aa7.57□□□□□ -1.2
SPTLC1-202ENST00000337841 HAMPP81172 84 aa7.57□□□□□ -1.2
SPTLC1-202ENST00000337841 COX17Q14061 63 aa7.57□□□□□ -1.2
SPTLC1-202ENST00000337841 ZNF625Q96I27 306 aaPredicted RBP7.57□□□□□ -1.2
SPTLC1-202ENST00000337841 ERG28Q9UKR5 140 aa7.57□□□□□ -1.2
SPTLC1-202ENST00000337841 TMA7Q9Y2S6 64 aaKnown RBP7.57□□□□□ -1.2
SPTLC1-202ENST00000337841 SCGB1D1O95968 90 aa7.56□□□□□ -1.2
SPTLC1-202ENST00000337841 PFN2P35080 140 aa7.56□□□□□ -1.2
SPTLC1-202ENST00000337841 NMUP48645 174 aa7.56□□□□□ -1.2
SPTLC1-202ENST00000337841 PLAC8Q9NZF1 115 aa7.56□□□□□ -1.2
SPTLC1-202ENST00000337841 DNAH5Q8TE73 4624 aa7.55□□□□□ -1.2
SPTLC1-202ENST00000337841 LINC00158P58513 81 aa7.55□□□□□ -1.2
SPTLC1-202ENST00000337841 MEIG1Q5JSS6 88 aa7.55□□□□□ -1.2
SPTLC1-202ENST00000337841 PKHD1P08F94 4074 aa7.55□□□□□ -1.2
SPTLC1-202ENST00000337841 LRP1BQ9NZR2 4599 aa7.54□□□□□ -1.2
SPTLC1-202ENST00000337841 HSBP1L1C9JCN9 74 aa7.54□□□□□ -1.2
SPTLC1-202ENST00000337841 SMR3BP02814 79 aaPredicted RBP7.54□□□□□ -1.2
SPTLC1-202ENST00000337841 ATOH7Q8N100 152 aa7.54□□□□□ -1.2
SPTLC1-202ENST00000337841 A0A1W2PNN7 141 aa7.53□□□□□ -1.2
SPTLC1-202ENST00000337841 TSPEAR-AS2P59090 65 aa7.53□□□□□ -1.2
SPTLC1-202ENST00000337841 XAGE1AQ9HD64 81 aa7.53□□□□□ -1.2
SPTLC1-202ENST00000337841 C9orf129Q5T035 196 aaKnown RBP7.52□□□□□ -1.21
SPTLC1-202ENST00000337841 Q8N1X5 172 aa7.52□□□□□ -1.21
SPTLC1-202ENST00000337841 C7orf33Q8WU49 177 aa7.52□□□□□ -1.21
SPTLC1-202ENST00000337841 A0A0U1RRA0 63 aa7.51□□□□□ -1.21
SPTLC1-202ENST00000337841 EPM2AB3EWF7 344 aa7.51□□□□□ -1.21
SPTLC1-202ENST00000337841 SMIM13P0DJ93 91 aa7.51□□□□□ -1.21
SPTLC1-202ENST00000337841 ANKRD39Q53RE8 183 aa7.5□□□□□ -1.21
SPTLC1-202ENST00000337841 SND1-IT1Q9HBX3 110 aa7.5□□□□□ -1.21
SPTLC1-202ENST00000337841 IGKV2D-26A0A0A0MRZ7 120 aa7.49□□□□□ -1.21
SPTLC1-202ENST00000337841 FAM168BA1KXE4 195 aa7.49□□□□□ -1.21
SPTLC1-202ENST00000337841 ZNF815PA8K554 130 aa7.49□□□□□ -1.21
SPTLC1-202ENST00000337841 PLA2G1BP04054 148 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms